Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_007779706,3851.→T 1.8% 17.3 ‑1.0 ‑0.0275intergenic (+73/‑130)nagE/glnSfused N‑acetyl glucosamine‑specific PTS enzyme IICBA components/glutaminyl‑tRNA synthetase
Rejected: Polymorphism prediction not supported by minimum number of reads on both strands.
Rejected: Polymorphic indel expands or contracts a homopolymer stretch.
Reads supporting (aligned to +/- strand):  new base (4/1):  ref base (134/136):  total (138/137)
Fisher's exact test strand distribution p-value = 3.70e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.00e-01

Only 100 of 305 total aligned reads displayed.

AACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTA  >  NC_007779/706285‑706485
                                                                                                     |                                                                                                    
 acacCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑t                                                                                                     <  1:323820/101‑1 (MQ=255)
   acCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑ttt                                                                                                   >  1:4561765/1‑101 (MQ=255)
       cTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑ttttttt                                                                                               <  1:7779741/101‑1 (MQ=255)
        tGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑tttttttt                                                                                              >  1:10168385/1‑101 (MQ=255)
         gTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑ttttttttt                                                                                             <  1:3527182/101‑1 (MQ=255)
          tATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTtc                                                                                            <  1:1479109/101‑1 (MQ=255)
           aTGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTtca                                                                                           <  1:1985299/101‑1 (MQ=255)
           aTGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTtca                                                                                           >  1:11075471/1‑101 (MQ=255)
            tGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTtcat                                                                                          <  1:6151026/101‑1 (MQ=255)
             gAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTtcatc                                                                                         >  1:1687255/1‑101 (MQ=255)
             gAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTtcatc                                                                                         >  1:6804623/1‑101 (MQ=255)
             gAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTtcatc                                                                                         >  1:3143821/1‑101 (MQ=255)
              aaaTCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTtcatca                                                                                        <  1:7392345/101‑1 (MQ=255)
              aaaTCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTtcatca                                                                                        >  1:1397051/1‑101 (MQ=255)
               aaTCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCatcaa                                                                                       >  1:8008428/1‑101 (MQ=255)
                aTCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCatcaat                                                                                      <  1:11026704/101‑1 (MQ=255)
                 tCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCatcaatc                                                                                     <  1:8159458/101‑1 (MQ=255)
                  cAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCatcaatca                                                                                    >  1:2102923/1‑101 (MQ=255)
                   aaaaaGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAatcat                                                                                   >  1:8317798/1‑101 (MQ=255)
                   aaaaaGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAatcat                                                                                   >  1:8588887/1‑101 (MQ=255)
                    aaaaGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAatcatc                                                                                  >  1:9362682/1‑101 (MQ=255)
                    aaaaGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAatcatc                                                                                  >  1:4892971/1‑101 (MQ=255)
                      aaGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCTTTTTTTTTTCCTCAATCATcc                                                                                 >  1:9102713/1‑101 (MQ=255)
                       aGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATcccc                                                                               <  1:9882084/101‑1 (MQ=255)
                         tAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCAt                                                                             >  1:6381161/1‑101 (MQ=255)
                            tCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAAt                                                                          <  1:9245655/101‑1 (MQ=255)
                             cTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATc                                                                         <  1:10253918/101‑1 (MQ=255)
                               gCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCt                                                                       >  1:5238625/1‑101 (MQ=255)
                               gCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCt                                                                       >  1:424501/1‑101 (MQ=255)
                               gCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCt                                                                       <  1:4084684/101‑1 (MQ=255)
                                cTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCtt                                                                      >  1:11679880/1‑101 (MQ=255)
                                 tttATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTg                                                                     >  1:10381632/1‑101 (MQ=255)
                                    aTGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTa                                                                  >  1:4430768/1‑101 (MQ=255)
                                    aTGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTa                                                                  <  1:9787628/101‑1 (MQ=255)
                                    aTGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTa                                                                  >  1:11432778/1‑101 (MQ=255)
                                      gCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGa                                                                <  1:4304884/101‑1 (MQ=255)
                                      gCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGa                                                                >  1:2622580/1‑101 (MQ=255)
                                       ccTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGAt                                                               >  1:2855572/1‑101 (MQ=255)
                                       ccTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGAt                                                               >  1:9193506/1‑101 (MQ=255)
                                        cTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGAtt                                                              <  1:10849780/101‑1 (MQ=255)
                                         tGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTTATCAATCATCCCCATAATCCTTGTTAGAttt                                                             >  1:8758115/1‑100 (MQ=255)
                                          gATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTAt                                                            >  1:11572973/1‑101 (MQ=255)
                                          gATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTAt                                                            >  1:8883523/1‑101 (MQ=255)
                                          gATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTAt                                                            >  1:11934832/1‑101 (MQ=255)
                                          gATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTAt                                                            <  1:11547177/101‑1 (MQ=255)
                                           aTGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATc                                                           <  1:6913389/101‑1 (MQ=255)
                                           aTGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATc                                                           <  1:6526564/101‑1 (MQ=255)
                                               gACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAAtt                                                       >  1:2932553/1‑101 (MQ=255)
                                               gACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAAtt                                                       >  1:1837549/1‑101 (MQ=255)
                                               gACGCTAGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAAtt                                                       >  1:8515886/1‑101 (MQ=255)
                                                aCGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCATCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAAttt                                                      >  1:2692791/1‑101 (MQ=255)
                                                  gCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTa                                                    >  1:7162559/1‑101 (MQ=255)
                                                  gCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTa                                                    >  1:5053612/1‑101 (MQ=255)
                                                  gCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTa                                                    <  1:2613930/101‑1 (MQ=255)
                                                   cTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTaa                                                   >  1:7744697/1‑101 (MQ=255)
                                                   cTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTaa                                                   <  1:11326791/101‑1 (MQ=255)
                                                     tGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTaaaa                                                 <  1:7275349/101‑1 (MQ=255)
                                                      gAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTaaaaa                                                <  1:6059904/101‑1 (MQ=255)
                                                      gAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTaaaaa                                                <  1:1761813/101‑1 (MQ=255)
                                                       aGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTaaaaaa                                               <  1:12086923/101‑1 (MQ=255)
                                                       aGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTaaaaaa                                               >  1:724801/1‑101 (MQ=255)
                                                       aGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTaaaaaa                                               >  1:9584756/1‑101 (MQ=255)
                                                         cGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACt                                             >  1:9389888/1‑101 (MQ=255)
                                                         cGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACt                                             <  1:7619694/101‑1 (MQ=255)
                                                          gTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTa                                            <  1:10568276/101‑1 (MQ=255)
                                                          gTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTa                                            >  1:6614761/1‑101 (MQ=255)
                                                          gTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTa                                            >  1:3322679/1‑101 (MQ=255)
                                                           tCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTaa                                           >  1:7869091/1‑101 (MQ=255)
                                                           tCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTaa                                           <  1:5662533/101‑1 (MQ=255)
                                                           tCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTaa                                           >  1:4751616/1‑101 (MQ=255)
                                                            cGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAAc                                          <  1:5313930/101‑1 (MQ=255)
                                                              cATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAg                                        <  1:11982200/101‑1 (MQ=255)
                                                               aTCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGt                                       <  1:10423537/101‑1 (MQ=255)
                                                                tCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGtt                                      <  1:10923179/101‑1 (MQ=255)
                                                                  caacaaTGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGt                                    >  1:5612512/1‑101 (MQ=255)
                                                                   aacaaTGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTc                                   >  1:3436762/1‑101 (MQ=255)
                                                                    acaaTGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCACTCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCa                                  <  1:7533024/101‑1 (MQ=255)
                                                                    acaaTGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCa                                  <  1:3977808/101‑1 (MQ=255)
                                                                    acaaTGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCa                                  <  1:3491810/101‑1 (MQ=255)
                                                                     caaTGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAg                                 >  1:5458435/1‑101 (MQ=255)
                                                                      aaTGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGc                                <  1:1033540/101‑1 (MQ=255)
                                                                      aaTGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGc                                >  1:386005/1‑101 (MQ=255)
                                                                       aTGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGcc                               <  1:9483910/101‑1 (MQ=255)
                                                                           cAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTc                           <  1:5791102/101‑1 (MQ=255)
                                                                            aaGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTcc                          >  1:3163142/1‑101 (MQ=255)
                                                                              gCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCg                        <  1:1005112/101‑1 (MQ=255)
                                                                               cGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGc                       <  1:1298697/101‑1 (MQ=255)
                                                                                   ggAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTtat                   <  1:5378573/101‑1 (MQ=255)
                                                                                      gaTCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAg                <  1:8058121/101‑1 (MQ=255)
                                                                                        tcttctCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGAt              <  1:644729/101‑1 (MQ=255)
                                                                                           tctcTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTATATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCAt           >  1:7054003/1‑101 (MQ=255)
                                                                                            ctctGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATa          >  1:1591160/1‑101 (MQ=255)
                                                                                             tctGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATAc         <  1:6082771/101‑1 (MQ=255)
                                                                                               tGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGc       >  1:4134463/1‑101 (MQ=255)
                                                                                                gCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGcc      <  1:2359544/101‑1 (MQ=255)
                                                                                                 ccGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCg     <  1:6676968/101‑1 (MQ=255)
                                                                                                  cGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGt    >  1:4843758/1‑101 (MQ=255)
                                                                                                  cGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCCTATAAGATCATACGCCGt    >  1:10737390/1‑101 (MQ=255)
                                                                                                   gC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGtt   >  1:11172115/1‑101 (MQ=255)
                                                                                                   gC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGtt   <  1:3807824/101‑1 (MQ=255)
                                                                                                     |                                                                                                    
AACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑TTTTTTTTTCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACGCCGTTA  >  NC_007779/706285‑706485

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.