Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_007779 | 837,856 | 1 | .→A | 1.2% | 7.8 ‑0.5 ‑0.5 | 260 | coding (1084/1086 nt) | ybiC | dehydrogenase |
Rejected: Polymorphism prediction not supported by minimum number of reads on both strands. | ||||||||||
Rejected: Polymorphic indel expands or contracts a homopolymer stretch. | ||||||||||
Reads supporting (aligned to +/- strand): new base (2/1): ref base (119/138): total (121/139) | ||||||||||
Fisher's exact test strand distribution p-value = 5.99e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.90e-01 |
Only 100 of 289 total aligned reads displayed.
TCCACTGGATGCGGGAAGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATAC > NC_007779/837756‑837956 | tCCACTGGATGCGGGAAGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCt < 1:6268735/101‑1 (MQ=255) ccACTGGATGCGGGAAGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑a < 1:11579511/101‑1 (MQ=255) cTGGATGCGGGAAGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAATTAGCCAGCT‑aaaa > 1:10518437/1‑101 (MQ=255) tGGATGCGGGAAGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑aaaaa < 1:3092857/101‑1 (MQ=255) tGGATGCGGGAAGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑aaaaa > 1:11221630/1‑101 (MQ=255) ggATGCGGGAAGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑aaaaaa < 1:690044/101‑1 (MQ=255) gCGGGAAGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGc < 1:7086833/101‑1 (MQ=255) cGGGAAGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGcc < 1:8527511/101‑1 (MQ=255) cGGGAAGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGcc < 1:5476756/101‑1 (MQ=255) gggAAGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGccc > 1:5586643/1‑101 (MQ=255) gAAGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGt > 1:1512092/1‑101 (MQ=255) aaGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTc < 1:1167137/101‑1 (MQ=255) aGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTcc > 1:7585493/1‑101 (MQ=255) gtGGGAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGGTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAg < 1:8479374/100‑1 (MQ=255) cTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAg > 1:5741290/1‑101 (MQ=255) tGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGt > 1:3122835/1‑101 (MQ=255) aGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCg > 1:9218170/1‑101 (MQ=255) aGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCg > 1:4721508/1‑101 (MQ=255) ggCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCgg > 1:7043015/1‑101 (MQ=255) ggCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCgg > 1:10104910/1‑101 (MQ=255) ccATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGAc < 1:9165827/101‑1 (MQ=255) aTTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACgg < 1:2606406/101‑1 (MQ=255) aTTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACgg < 1:1570224/101‑1 (MQ=255) tttGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACggg > 1:3416936/1‑101 (MQ=255) ttGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGc > 1:860777/1‑101 (MQ=255) tgtgATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCa > 1:333748/1‑101 (MQ=255) tgtgATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCa < 1:2545683/101‑1 (MQ=255) tgtgATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCa < 1:1063095/101‑1 (MQ=255) tgtgATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCa > 1:11903287/1‑101 (MQ=255) tgATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCaaa > 1:3712938/1‑101 (MQ=255) aTGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACa > 1:4202227/1‑101 (MQ=255) tGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACaa > 1:1506858/1‑101 (MQ=255) tGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAACT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACaa < 1:7763247/101‑1 (MQ=255) cAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAgg > 1:11355128/1‑101 (MQ=255) cAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAgg > 1:4434532/1‑101 (MQ=255) aGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAggg > 1:9349193/1‑101 (MQ=255) aGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAggg < 1:75415/101‑1 (MQ=255) aGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAggg > 1:9566134/1‑101 (MQ=255) gcgGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACACGGGTaa > 1:5870055/1‑101 (MQ=255) cgGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAAc < 1:1744825/101‑1 (MQ=255) cAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATa < 1:4109188/101‑1 (MQ=255) aGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAg > 1:4767248/1‑101 (MQ=255) gATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAgg < 1:3393654/101‑1 (MQ=255) ggTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCa < 1:7936021/101‑1 (MQ=255) aTGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATg < 1:2675261/101‑1 (MQ=255) tGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGa > 1:1286792/1‑101 (MQ=255) tGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGGAACATAGGATCAATGa > 1:6091236/1‑101 (MQ=255) ccGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAgg < 1:7611416/101‑1 (MQ=255) cGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGGCGGGGAAACAAAGGGAACACAAGATCAAAGAggg > 1:8003523/1‑101 (MQ=255) cGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAggg < 1:5100476/101‑1 (MQ=255) ggAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGt > 1:10833362/1‑101 (MQ=255) gAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGtt > 1:1542721/1‑101 (MQ=255) gagaCGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTaga < 1:2471720/101‑1 (MQ=255) agaCGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTagag > 1:3270725/1‑101 (MQ=255) gaCGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGc < 1:9894572/101‑1 (MQ=255) gTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCata > 1:2964574/1‑101 (MQ=255) gTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCata > 1:9635545/1‑101 (MQ=255) gTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCata > 1:688058/1‑101 (MQ=255) ttGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCatat < 1:5383482/101‑1 (MQ=255) aGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGt > 1:3807945/1‑101 (MQ=255) aGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGt < 1:6741901/101‑1 (MQ=255) aGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGt > 1:6282021/1‑101 (MQ=255) aGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGGTAGAGCATATGCGt > 1:8941490/1‑101 (MQ=255) ggCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTc < 1:9524218/101‑1 (MQ=255) gCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCt < 1:455541/101‑1 (MQ=255) cTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTg > 1:11323516/1‑101 (MQ=255) tttCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGGAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGt > 1:2615937/1‑101 (MQ=255) ttCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTc < 1:6134838/101‑1 (MQ=255) ttCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTc < 1:2062817/101‑1 (MQ=255) ttCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTc < 1:7662226/101‑1 (MQ=255) ttCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTc < 1:5384070/101‑1 (MQ=255) tCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCg < 1:656884/101‑1 (MQ=255) tCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCg > 1:10990933/1‑101 (MQ=255) tCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCg > 1:4363718/1‑101 (MQ=255) cTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCgg < 1:871805/101‑1 (MQ=255) cTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCgg < 1:9769273/101‑1 (MQ=255) tGTCAGCAGTTAGCCAGCTAAAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCgg < 1:7804289/101‑1 (MQ=255) tGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGc < 1:8206726/101‑1 (MQ=255) gTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCa < 1:2818353/101‑1 (MQ=255) cagcagTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCaaa < 1:1927033/101‑1 (MQ=255) gcagTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAaca < 1:915233/101‑1 (MQ=255) cagTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAacag < 1:10061373/101‑1 (MQ=255) cagTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAacag < 1:7001642/101‑1 (MQ=255) cagTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAacag > 1:1361119/1‑101 (MQ=255) tAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAacagacag < 1:6208460/101‑1 (MQ=255) aGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAgg > 1:3765791/1‑101 (MQ=255) aGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAgg > 1:6481063/1‑101 (MQ=255) aGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAgg < 1:4661597/101‑1 (MQ=255) gCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAggg > 1:11748418/1‑101 (MQ=255) gCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAggg < 1:9693289/101‑1 (MQ=255) cAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGaa > 1:11728564/1‑101 (MQ=255) cAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGaa > 1:10259806/1‑101 (MQ=255) cAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGaa > 1:7280891/1‑101 (MQ=255) gCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAAt > 1:3568744/1‑101 (MQ=255) gCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAAt < 1:2345099/101‑1 (MQ=255) gCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAAt > 1:10399159/1‑101 (MQ=255) gCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAAt < 1:4918685/101‑1 (MQ=255) gCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGGAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAAt > 1:3964941/1‑101 (MQ=255) cT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATa > 1:6337420/1‑101 (MQ=255) t‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATAc > 1:7138573/1‑101 (MQ=255) | TCCACTGGATGCGGGAAGCTGGCAGGCCATTTGTGATGCAGCGCGGCAGATTGGTATGCCGGAAGAGACGTTGCAGGCTTTCTGTCAGCAGTTAGCCAGCT‑AAAAAAAAGCCCGTCCAGTGGCGGACGGGCAAACAAGGGTAACATAGGATCAATGAGGGTTAGAGCATATGCGTCTGTCGGCAAACAGACAGGGAAATAC > NC_007779/837756‑837956 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |