Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077791,716,0311.→T 1.5% 12.6 ‑0.5 ‑0.3266intergenic (+46/‑60)ydgR/gsttransporter/glutathionine S‑transferase
Rejected: Polymorphism prediction not supported by minimum number of reads on both strands.
Rejected: Polymorphic indel expands or contracts a homopolymer stretch.
Reads supporting (aligned to +/- strand):  new base (3/1):  ref base (130/132):  total (133/133)
Fisher's exact test strand distribution p-value = 6.22e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.15e-01

Only 100 of 297 total aligned reads displayed.

CGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGCCTGCTCTCTCGCTTC  >  NC_007779/1715932‑1716131
                                                                                                    |                                                                                                    
cGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑t                                                                                                     >  1:4744231/1‑101 (MQ=255)
    tGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑ttttt                                                                                                 <  1:10631003/101‑1 (MQ=255)
      aCGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑ttttttt                                                                                               <  1:7342456/101‑1 (MQ=255)
        gCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑ttttttttt                                                                                             <  1:10343360/101‑1 (MQ=255)
         cAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTg                                                                                            >  1:3547237/1‑101 (MQ=255)
          aGGATGACGCTGCAGACAAAGCGGGGAAAGCAGCCGTAGCGTAAAATTCAGGGAACCTTTTTTAAAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGt                                                                                           <  1:833989/101‑1 (MQ=255)
          aGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGt                                                                                           >  1:5383835/1‑101 (MQ=255)
           ggATGTCGGTGCAGACAGGGCGGCGAAGGCGGCAATAGCGTAAAATTCAGGGAAACTCTTTTAAAATCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGtt                                                                                          <  1:11249337/101‑1 (MQ=255)
           ggATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGAAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGtt                                                                                          >  1:3871709/1‑101 (MQ=255)
             aTGACGCTGCAGACAAAGGGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCa                                                                                        <  1:11688899/101‑1 (MQ=255)
              agccgttGCAGAAAAAGCGGGGAAAGCAGCTGTAGAAAAAAATTGGGGTAAACTCTTTGCCAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAg                                                                                       <  1:4032230/95‑1 (MQ=255)
               gACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTTTTCAGc                                                                                      >  1:3689897/1‑101 (MQ=255)
               gACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGc                                                                                      >  1:7708102/1‑101 (MQ=255)
                aCGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCa                                                                                     <  1:4184157/101‑1 (MQ=255)
                  gttGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAAc                                                                                   <  1:1523478/99‑1 (MQ=255)
                  ggtgaaGACAAAGGGGGAAAAGCAGCCGTAGCGTAAATTTCAGGAAAACTCTTTTAAAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAAc                                                                                   <  1:2936717/96‑1 (MQ=255)
                  gCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAAc                                                                                   >  1:6857177/1‑101 (MQ=255)
                  gCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAAc                                                                                   >  1:9186212/1‑101 (MQ=255)
                   cTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAACCTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACg                                                                                  <  1:9842089/101‑1 (MQ=255)
                    tGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGc                                                                                 >  1:11486071/1‑101 (MQ=255)
                     gCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCa                                                                                <  1:5770696/101‑1 (MQ=255)
                       aGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACt                                                                              <  1:7465443/101‑1 (MQ=255)
                         aCAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTAc                                                                            >  1:6188441/1‑101 (MQ=255)
                            aaGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAACCTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCAt                                                                         <  1:6074158/101‑1 (MQ=255)
                             ggcgcagAAATCAGCCGTAGCTTAAAATTCAGGGAAGCTCTTTAAAAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATa                                                                        <  1:9614411/95‑1 (MQ=255)
                             aGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATa                                                                        >  1:10712797/1‑101 (MQ=255)
                                 gcgAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACttt                                                                    >  1:7826601/1‑101 (MQ=255)
                                 gcgAAAGCAGCCGTAGCGTAAAATTCAGGAAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACttt                                                                    <  1:10416855/101‑1 (MQ=255)
                                 gagaagacaggCGTAGCGTAAAATTCAGGGAAGCTTTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACttt                                                                    <  1:943950/94‑1 (MQ=255)
                                  caatagcagcCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCACAATTTa                                                                   <  1:10574789/97‑1 (MQ=255)
                                     aaGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAATGCACTACCATACTTTAAAc                                                                >  1:1818082/1‑101 (MQ=255)
                                      agcagcCGTAGCGTAAAATTCAGGGAACCTTTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAAcc                                                               <  1:3394660/101‑1 (MQ=255)
                                      agcagcCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAAcc                                                               >  1:5341350/1‑101 (MQ=255)
                                      agcagcCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAAcc                                                               >  1:3023744/1‑101 (MQ=255)
                                       gcagcCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACca                                                              <  1:11376112/101‑1 (MQ=255)
                                        cagcCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACcac                                                             >  1:7032233/1‑101 (MQ=255)
                                        cagcCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACcac                                                             <  1:7586207/101‑1 (MQ=255)
                                        cacgcGTAGCGAAAAATTCAGGGAATCTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACcac                                                             <  1:4073660/97‑1 (MQ=255)
                                         agcCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACcaca                                                            >  1:11178171/1‑101 (MQ=255)
                                           ccGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGa                                                          >  1:2277656/1‑101 (MQ=255)
                                            cGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGAc                                                         >  1:5962317/1‑101 (MQ=255)
                                               aGCGTAAAATTCAGGGAAACTTTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACaaa                                                      <  1:268417/101‑1 (MQ=255)
                                               aGCGAAAAATTCAGGGAACCTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACaaa                                                      <  1:10486981/101‑1 (MQ=255)
                                                gCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACaaaa                                                     >  1:10008319/1‑101 (MQ=255)
                                                gCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCAAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACCCACTACCATACTTTAAACCACAGACaaaa                                                     >  1:1940468/1‑101 (MQ=255)
                                                 cGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAg                                                    >  1:6479989/1‑101 (MQ=255)
                                                  gTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAgg                                                   >  1:2824016/1‑101 (MQ=255)
                                                   tAAAATTCAGGGAATCTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGa                                                  <  1:9760851/101‑1 (MQ=255)
                                                   tAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGa                                                  <  1:11064810/101‑1 (MQ=255)
                                                      aaTTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGtt                                               >  1:7431199/1‑101 (MQ=255)
                                                       aTTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTa                                              >  1:6597629/1‑101 (MQ=255)
                                                        ttCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTAc                                             >  1:3643954/1‑101 (MQ=255)
                                                        ttCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTAc                                             >  1:2128989/1‑101 (MQ=255)
                                                         tCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTAcc                                            >  1:2108565/1‑101 (MQ=255)
                                                          cAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCg                                           <  1:2649825/101‑1 (MQ=255)
                                                           aGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGa                                          >  1:1415278/1‑101 (MQ=255)
                                                           aGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGa                                          >  1:11522439/1‑101 (MQ=255)
                                                            gggAAACTTTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGAt                                         <  1:10057297/101‑1 (MQ=255)
                                                             gaaaccttttttACAAGCCGCTAACTTTTCGTTAGCGGCTTTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGAt                                         <  1:4611777/93‑1 (MQ=255)
                                                              gAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGa                                       <  1:11641977/101‑1 (MQ=255)
                                                               aaaCTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGaa                                      <  1:9059969/101‑1 (MQ=255)
                                                                aaCTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGaaa                                     >  1:2753587/1‑101 (MQ=255)
                                                                aaCTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGaaa                                     <  1:3742922/101‑1 (MQ=255)
                                                                 aCTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAAt                                    >  1:2960840/1‑101 (MQ=255)
                                                                  ctctTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAAtt                                   <  1:5592060/101‑1 (MQ=255)
                                                                   tctTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTg                                  >  1:9275155/1‑101 (MQ=255)
                                                                    ctTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGt                                 <  1:6664260/101‑1 (MQ=255)
                                                                     ttttACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGtt                                >  1:6318913/1‑101 (MQ=255)
                                                                     ttttACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGtt                                >  1:1190845/1‑101 (MQ=255)
                                                                      tttACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTc                               <  1:8240280/101‑1 (MQ=255)
                                                                      ttaaCAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTc                               <  1:10860597/98‑1 (MQ=255)
                                                                        tccAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTa                             <  1:174510/99‑1 (MQ=255)
                                                                        tACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTa                             >  1:5493464/1‑101 (MQ=255)
                                                                         aaaaGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTAc                            <  1:8809428/99‑1 (MQ=255)
                                                                         aCAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTAc                            <  1:3601550/101‑1 (MQ=255)
                                                                           aaGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACaa                          <  1:9883774/101‑1 (MQ=255)
                                                                             gCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAAc                        <  1:3343255/101‑1 (MQ=255)
                                                                             gCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAAc                        <  1:10098076/101‑1 (MQ=255)
                                                                              ccGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAAcc                       <  1:5667922/101‑1 (MQ=255)
                                                                               ctcTAACTTTTGGTTAGCGGC‑TTTTTTTGTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCg                      <  1:6974262/99‑1 (MQ=255)
                                                                                gCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCgg                     <  1:2479496/101‑1 (MQ=255)
                                                                                gCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCgg                     >  1:8626627/1‑101 (MQ=255)
                                                                                gCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCgg                     >  1:10945519/1‑101 (MQ=255)
                                                                                  tAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGt                   >  1:6920324/1‑101 (MQ=255)
                                                                                  tAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGt                   >  1:3270796/1‑101 (MQ=255)
                                                                                    aCTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGc                 >  1:12032514/1‑101 (MQ=255)
                                                                                    aCTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGc                 >  1:8404449/1‑101 (MQ=255)
                                                                                      ttttCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGCCt               <  1:7657584/101‑1 (MQ=255)
                                                                                      ttttCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGCCt               <  1:4980049/101‑1 (MQ=255)
                                                                                       tttCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGCCTg              >  1:10392020/1‑101 (MQ=255)
                                                                                        ttCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGCCTGc             <  1:7729199/101‑1 (MQ=255)
                                                                                        ttCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGCCTGc             >  1:6731514/1‑101 (MQ=255)
                                                                                           gTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGCCTGctct          >  1:5121155/1‑101 (MQ=255)
                                                                                           gTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGCCTGctct          <  1:2580092/101‑1 (MQ=255)
                                                                                             tAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGCCTGctctct        >  1:8064957/1‑101 (MQ=255)
                                                                                             tAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGCCTGctctct        <  1:4535393/101‑1 (MQ=255)
                                                                                              aGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGCCTGCtctctc       >  1:5743412/1‑101 (MQ=255)
                                                                                              aGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGCCTGCtctctc       <  1:7100054/101‑1 (MQ=255)
                                                                                               gCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGCCTGCTCTCTCg      <  1:1281761/101‑1 (MQ=255)
                                                                                                   c‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGCCTGCTCTCTCGCTTc  >  1:6103246/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
CGCATGACGCAGGATGACGCTGCAGACAAAGCGGCGAAAGCAGCCGTAGCGTAAAATTCAGGGAAACTCTTTTACAAGCCGCTAACTTTTCGTTAGCGGC‑TTTTTTTTTGTTCAGCAACGCACTACCATACTTTAAACCACAGACAAAAGGAGTTACCGATGAAATTGTTCTACAAACCGGGTGCCTGCTCTCTCGCTTC  >  NC_007779/1715932‑1716131

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.