Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077792,623,1551.→G 0.8% 2.8 ‑1.6 ‑0.5250coding (1456/2067 nt)ppkpolyphosphate kinase, component of RNA degradosome
Rejected: Polymorphism prediction not supported by minimum number of reads on both strands.
Rejected: Polymorphic indel expands or contracts a homopolymer stretch.
Reads supporting (aligned to +/- strand):  new base (2/0):  ref base (109/139):  total (111/139)
Fisher's exact test strand distribution p-value = 1.96e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.47e-01

Only 100 of 273 total aligned reads displayed.

TGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGAAATGGTGG  >  NC_007779/2623055‑2623254
                                                                                                     |                                                                                                    
 gCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTAcggc‑g                                                                                                     <  1:10485315/101‑1 (MQ=255)
   acacaTCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑ggg                                                                                                   <  1:6319962/101‑1 (MQ=255)
    cacaTCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGt                                                                                                  <  1:8491795/101‑1 (MQ=255)
     acaTCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTa                                                                                                 <  1:923543/101‑1 (MQ=255)
      caTCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTAt                                                                                                <  1:8537224/101‑1 (MQ=255)
       aTCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTAtt                                                                                               <  1:3472771/101‑1 (MQ=255)
        tCGGGACCGGGAACTTTAACGAAAAACCCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTAttt                                                                                              <  1:877581/101‑1 (MQ=255)
        tCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTAttt                                                                                              <  1:6516030/101‑1 (MQ=255)
           ggACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGGTTTAAc                                                                                           >  1:9543579/1‑101 (MQ=255)
            gACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACt                                                                                          <  1:5564673/101‑1 (MQ=255)
            gACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACt                                                                                          <  1:6053764/101‑1 (MQ=255)
             aCCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACtt                                                                                         <  1:5874142/101‑1 (MQ=255)
             aCCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTAACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGAttttaatt                                                                                         >  1:3955700/1‑96 (MQ=255)
              ccGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACttt                                                                                        <  1:9347373/101‑1 (MQ=255)
              ccGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACttt                                                                                        <  1:10597205/101‑1 (MQ=255)
              ccGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAAAttt                                                                                        >  1:10768849/1‑101 (MQ=255)
                 ggAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTAtt                                                                                     <  1:3167187/101‑1 (MQ=255)
                 ggAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAAATTTAtt                                                                                     >  1:7138349/1‑101 (MQ=255)
                   aaCTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGa                                                                                   <  1:6538838/101‑1 (MQ=255)
                   aaCTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAAATTTAttta                                                                                   >  1:2226702/1‑99 (MQ=255)
                     cTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGaaa                                                                                 <  1:6752212/101‑1 (MQ=255)
                      tttAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCGGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTATCTTTTTTTaaaa                                                                                >  1:963190/1‑101 (MQ=255)
                      tttAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGaaaa                                                                                <  1:2982458/101‑1 (MQ=255)
                      tttAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTGaaaa                                                                                >  1:4235080/1‑101 (MQ=255)
                       ttAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAAc                                                                               <  1:5336410/101‑1 (MQ=255)
                       ttAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAAc                                                                               <  1:5351556/101‑1 (MQ=255)
                       ttAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAAc                                                                               <  1:1483165/101‑1 (MQ=255)
                        tAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAAcc                                                                              <  1:4890243/101‑1 (MQ=255)
                        tAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAAcc                                                                              <  1:4489233/101‑1 (MQ=255)
                        tAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTGAAAAcc                                                                              >  1:2614599/1‑101 (MQ=255)
                         aaCGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTTACTTTATTTGAAAccc                                                                             >  1:11927846/1‑101 (MQ=255)
                          aCGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTGAAAACCCa                                                                            >  1:3551947/1‑101 (MQ=255)
                          aCGAAAAAACCGCGCGTCTTTATACTGACTATTCATTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCa                                                                            <  1:4548984/101‑1 (MQ=255)
                           cGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTTAAAACCCAt                                                                           >  1:4777363/1‑101 (MQ=255)
                             aaaaaaCCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTTACTTTATTTAAAACCCATAc                                                                         >  1:5901313/1‑101 (MQ=255)
                              aaaaaCCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATAcc                                                                        <  1:7772158/101‑1 (MQ=255)
                              aaaaaCCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGCATTTAACTTTATTTAAAAACCATAcc                                                                        >  1:3269397/1‑101 (MQ=255)
                               aaaaCCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCg                                                                       >  1:8226116/1‑101 (MQ=255)
                                aaaCCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGt                                                                      <  1:9036112/101‑1 (MQ=255)
                                 aaCCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑c                                                                    <  1:1218932/101‑1 (MQ=255)
                                 aaCCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTTAAAAACCAAACCgcc                                                                     >  1:76519/1‑99 (MQ=255)
                                   ccGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCg                                                                  <  1:6808210/101‑1 (MQ=255)
                                     gcgcgTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTTAAAACCCCTACCGT‑CCggg                                                                >  1:1627033/1‑100 (MQ=255)
                                        cgTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGAc                                                             <  1:128070/101‑1 (MQ=255)
                                        cgTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGAc                                                             >  1:5787457/1‑101 (MQ=255)
                                         gTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGGAAACCCATACCGT‑CCGGGGACa                                                            >  1:1666153/1‑101 (MQ=255)
                                          tCTTTATACTGTCTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACAt                                                           <  1:5116883/101‑1 (MQ=255)
                                           cTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACAtt                                                          <  1:3367698/101‑1 (MQ=255)
                                           cTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACAtt                                                          >  1:4667647/1‑101 (MQ=255)
                                             ttATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTTAAAACCCATACCGT‑CCGGTGACATTTg                                                        >  1:5577049/1‑101 (MQ=255)
                                             ttATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTGCAAACCCATACCGT‑CCGGTGACATTTg                                                        >  1:10981021/1‑101 (MQ=255)
                                              tataCTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTCTTTAACTTTATTTAAAACCCCTACCGT‑CCGGTGACATTTGa                                                       >  1:5737830/1‑101 (MQ=255)
                                              tataCTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTTAAAACCCATACCGT‑CCGGGGACATTTGa                                                       >  1:5288027/1‑101 (MQ=255)
                                              tataCTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGa                                                       <  1:9152124/101‑1 (MQ=255)
                                              tataCTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGa                                                       <  1:11531123/101‑1 (MQ=255)
                                                taCTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGatt                                                     <  1:195314/101‑1 (MQ=255)
                                                 aCTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGatta                                                    <  1:7334865/101‑1 (MQ=255)
                                                 aCTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGatta                                                    <  1:10445303/101‑1 (MQ=255)
                                                 aCTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGatta                                                    >  1:3755185/1‑101 (MQ=255)
                                                   tGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTTTTTAAAACCCAAACCCT‑CCCGGGGCATTTTattatt                                                  >  1:8914603/1‑101 (MQ=255)
                                                     aCTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTa                                                <  1:8702392/101‑1 (MQ=255)
                                                     aCTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTa                                                <  1:4091674/101‑1 (MQ=255)
                                                      cTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTaa                                               <  1:4981554/101‑1 (MQ=255)
                                                        aTTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATg                                             <  1:930098/101‑1 (MQ=255)
                                                         ttCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATgg                                            >  1:10207624/1‑101 (MQ=255)
                                                           cGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTTAAAAACCATACCGT‑CCGGGGACATTTGATTTTTTAATGGTa                                          >  1:5946283/1‑101 (MQ=255)
                                                            gTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTTAAAACCCATACCGT‑CCGGTGACATTTTATTATTTAATGGTAt                                         >  1:9856592/1‑101 (MQ=255)
                                                            gTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTGAAAACCCCTACCGT‑CCGGTGACATTTGATTATTTAATGGTAt                                         >  1:6921257/1‑101 (MQ=255)
                                                             ttGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATc                                        <  1:4024465/101‑1 (MQ=255)
                                                              tGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTTACTTTTTTTTAAAACCATACCCT‑CCGGTGGCATTTTATTATTTTATTGTATcg                                       >  1:8328103/1‑101 (MQ=255)
                                                               gCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATtgc                                      >  1:6134000/1‑101 (MQ=255)
                                                                cTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATcgcc                                     <  1:1356056/101‑1 (MQ=255)
                                                                cTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATcgcc                                     <  1:10032396/101‑1 (MQ=255)
                                                                cTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTGAAAACCCATACCGT‑CCGGGGACATTTGATTATTTAATGGTATcgcc                                     >  1:1592164/1‑101 (MQ=255)
                                                                 tGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTTACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATcgccg                                    >  1:4919350/1‑101 (MQ=255)
                                                                 tGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTTACTTTTTTTAAAAACCAAACCCTCCCGATGAAATTT‑ATTATTTTATTGTATcaccc                                    >  1:8124098/1‑100 (MQ=255)
                                                                 tGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATcgccg                                    >  1:11013002/1‑101 (MQ=255)
                                                                   aCCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGGGACATTTTATTTTTTTATTGTATCGCCGCa                                  >  1:6206125/1‑101 (MQ=255)
                                                                      gccgATGCGCGCATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCaaaa                               >  1:6484485/1‑101 (MQ=255)
                                                                       ccgATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAAc                              <  1:10299308/101‑1 (MQ=255)
                                                                        cgATGCGCGCATCACCAACGAAGTACGGCGGGGAATTTAATTTTTTTGAAAACCCATACCTC‑CCGGTGCATTTTGTTTATTTATTGTAATCGCCCAAAAAc                              >  1:2892582/1‑101 (MQ=255)
                                                                        cgATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACt                             <  1:8077141/101‑1 (MQ=255)
                                                                           tGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTccc                          <  1:10939639/101‑1 (MQ=255)
                                                                            gcgcgcATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCccg                         <  1:8455056/101‑1 (MQ=255)
                                                                                gcATCACCAACGAAGTACGGC‑GGGGATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCcgccgc                     >  1:10569317/1‑101 (MQ=255)
                                                                                   tCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTa                  <  1:11778140/101‑1 (MQ=255)
                                                                                    cACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACTTTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTAt                 <  1:3686920/101‑1 (MQ=255)
                                                                                    cACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTAt                 <  1:11322197/101‑1 (MQ=255)
                                                                                    cACCAACGAAGTACGGC‑GGGGATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTAt                 >  1:12055989/1‑101 (MQ=255)
                                                                                      ccAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTg               <  1:7500224/101‑1 (MQ=255)
                                                                                      ccAACGAAGTACGGC‑GCGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTg               <  1:9440380/101‑1 (MQ=255)
                                                                                        aaCGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTa             <  1:7935250/101‑1 (MQ=255)
                                                                                        aaCGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTa             >  1:3715270/1‑101 (MQ=255)
                                                                                          cGAAGTGCGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATg           >  1:1141238/1‑101 (MQ=255)
                                                                                            aaGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGaa         >  1:1411084/1‑101 (MQ=255)
                                                                                            aaGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGaa         <  1:8658902/101‑1 (MQ=255)
                                                                                              gTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGaact       >  1:9942511/1‑99 (MQ=255)
                                                                                                  ggc‑ggGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGAAAtggtg   <  1:2527967/101‑1 (MQ=255)
                                                                                                   gc‑ggGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGAAAtggtgg  >  1:8819824/1‑101 (MQ=255)
                                                                                                   gc‑ggGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGAAAtggtgg  <  1:1973911/101‑1 (MQ=255)
                                                                                                     |                                                                                                    
TGCACACATCGGGACCGGGAACTTTAACGAAAAAACCGCGCGTCTTTATACTGACTATTCGTTGCTGACCGCCGATGCGCGCATCACCAACGAAGTACGGC‑GGGTATTTAACTTTATTGAAAACCCATACCGT‑CCGGTGACATTTGATTATTTAATGGTATCGCCGCAAAACTCCCGCCGCCTATTGTATGAAATGGTGG  >  NC_007779/2623055‑2623254

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.