| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,689,613 | 1 | .→A | 0.7% | 2.5 0.0 ‑0.1 | 307 | intergenic (+60/+36) | hdfR/trpT | DNA‑binding transcriptional regulator/tRNA‑Trp |
| Rejected: Polymorphism prediction not supported by minimum number of reads on both strands. | ||||||||||
| Rejected: Polymorphic indel expands or contracts a homopolymer stretch. | ||||||||||
| Reads supporting (aligned to +/- strand): new base (1/1): ref base (174/131): total (175/132) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.66e-01 | ||||||||||
Only 100 of 343 total aligned reads displayed.
GCGATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTACCAATTGA > NC_007779/3689513‑3689713 gcgATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGAt > 1:3772406/1‑101 (MQ=255) gATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATaa < 1:10018687/101‑1 (MQ=255) gATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATaa > 1:4549133/1‑101 (MQ=255) gATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATaa > 1:9666066/1‑101 (MQ=255) aTCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATaaa > 1:2356157/1‑101 (MQ=255) tCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATaaaa > 1:1481970/1‑101 (MQ=255) tGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAAt > 1:3027180/1‑101 (MQ=255) gAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATc > 1:6437364/1‑101 (MQ=255) aaaaTTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATcc > 1:11650191/1‑101 (MQ=255) aaaaTTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATcc < 1:10261751/101‑1 (MQ=255) aaaTTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCt < 1:7665149/101‑1 (MQ=255) aaaTTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCt < 1:11069858/101‑1 (MQ=255) aTTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTa > 1:1254331/1‑101 (MQ=255) ttAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAg < 1:6921181/101‑1 (MQ=255) tAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGc < 1:4012651/101‑1 (MQ=255) tAACGTGCTGGATGAAGTGTATTAATACGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGc < 1:1880404/101‑1 (MQ=255) aCGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCtt > 1:38744/1‑101 (MQ=255) gTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTc > 1:11929429/1‑101 (MQ=255) gTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTc > 1:2335531/1‑101 (MQ=255) tGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCg > 1:4155554/1‑101 (MQ=255) tGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCg < 1:9128518/101‑1 (MQ=255) tGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCg > 1:9050174/1‑101 (MQ=255) gCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGc < 1:260834/101‑1 (MQ=255) gCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGc > 1:4251481/1‑101 (MQ=255) tGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTa > 1:683596/1‑101 (MQ=255) tGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTa < 1:5813412/101‑1 (MQ=255) tGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTa < 1:9451823/101‑1 (MQ=255) tGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTa > 1:95295/1‑101 (MQ=255) gATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAg > 1:2432677/1‑101 (MQ=255) aTGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAgg > 1:4109544/1‑101 (MQ=255) aTGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAgg > 1:10871101/1‑101 (MQ=255) aTGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAgg < 1:9070343/101‑1 (MQ=255) tGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTTAGATAAAAAAAATCCTTAGCTTTCGCTAAGga > 1:353775/1‑101 (MQ=255) tGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCGTTAGCTTTCGCTAAGga > 1:8499265/1‑101 (MQ=255) tGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGga > 1:5387410/1‑101 (MQ=255) tGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGga > 1:677638/1‑101 (MQ=255) gAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGgat < 1:1221948/101‑1 (MQ=255) aGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGgatga > 1:3571197/1‑101 (MQ=255) tgtATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGAtt > 1:7154129/1‑101 (MQ=255) gtATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGAttt > 1:707272/1‑101 (MQ=255) gtATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGAttt < 1:8082132/101‑1 (MQ=255) aTTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCt > 1:6534136/1‑101 (MQ=255) atatGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCa > 1:9279788/1‑101 (MQ=255) atatGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCa < 1:1042660/101‑1 (MQ=255) tatGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAg > 1:638894/1‑101 (MQ=255) atGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAgg > 1:7163800/1‑101 (MQ=255) gAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAgggg > 1:9195710/1‑101 (MQ=255) aTGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCg > 1:334056/1‑101 (MQ=255) ctggcAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGgaga > 1:8439305/1‑101 (MQ=255) aaGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTc > 1:9748778/1‑101 (MQ=255) aaGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTc > 1:8829320/1‑101 (MQ=255) ggATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGa < 1:6010505/101‑1 (MQ=255) aTGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAAc < 1:1101180/101‑1 (MQ=255) aTGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAAc < 1:11520446/101‑1 (MQ=255) aTGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAAc > 1:5156844/1‑101 (MQ=255) tGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACt > 1:11780781/1‑101 (MQ=255) gCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTc < 1:9937218/101‑1 (MQ=255) gCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTc > 1:7619836/1‑101 (MQ=255) gCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTc > 1:1356430/1‑101 (MQ=255) gCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTc < 1:4722628/101‑1 (MQ=255) ccGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTcc > 1:11170524/1‑101 (MQ=255) ggTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCa > 1:5634495/1‑101 (MQ=255) gTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCaa > 1:1545094/1‑101 (MQ=255) aGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACAccc > 1:8589711/1‑101 (MQ=255) gATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCgg > 1:5084528/1‑101 (MQ=255) tttACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGtt < 1:10107039/101‑1 (MQ=255) tttACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGtt < 1:11607844/101‑1 (MQ=255) ttACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGttt < 1:10654860/101‑1 (MQ=255) ttACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGttt > 1:113330/1‑101 (MQ=255) ttACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGttt < 1:7503544/101‑1 (MQ=255) aCTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTg > 1:8186404/1‑101 (MQ=255) cTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTgg < 1:887776/101‑1 (MQ=255) ttCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGga > 1:4853797/1‑101 (MQ=255) tCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGgag > 1:2838870/1‑101 (MQ=255) cGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGgaga > 1:5036983/1‑101 (MQ=255) gagaGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGAcc < 1:3185079/101‑1 (MQ=255) gagGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCgg > 1:2558820/1‑101 (MQ=255) gagGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCgg < 1:6612549/101‑1 (MQ=255) agGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGt < 1:9911298/101‑1 (MQ=255) gggTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTg > 1:5463334/1‑101 (MQ=255) ggTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGc > 1:7235217/1‑101 (MQ=255) ggTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGc > 1:3263533/1‑101 (MQ=255) ggTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGc > 1:2684430/1‑101 (MQ=255) ggTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGc > 1:3446424/1‑101 (MQ=255) gTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGct < 1:2217732/101‑1 (MQ=255) tATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGctct > 1:9831026/1‑101 (MQ=255) tATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGctct > 1:7901473/1‑101 (MQ=255) tATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTACCAACACCCGGTTTTGGAGACCGGTGctct > 1:5506067/1‑101 (MQ=255) aTTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTa > 1:4966610/1‑101 (MQ=255) ttCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTAcc > 1:1636694/1‑101 (MQ=255) ttCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTAcc > 1:7694327/1‑101 (MQ=255) ttCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTAcc > 1:4336242/1‑101 (MQ=255) aGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTACCAAt > 1:1816685/1‑101 (MQ=255) aGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTACCAAt < 1:9577295/101‑1 (MQ=255) gATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTACCAAtt > 1:1444918/1‑101 (MQ=255) gATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTACCAAtt > 1:11889277/1‑101 (MQ=255) gATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTACCAAtt > 1:7296177/1‑101 (MQ=255) aTAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTACCAATTg < 1:2145413/101‑1 (MQ=255) tAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTACCAATTGa < 1:10539765/101‑1 (MQ=255) tAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTACCAATTGa > 1:6143323/1‑101 (MQ=255) GCGATCTTTTGAAAATTAACGTGCTGGATGAAGTGTATTAATATGAATGGCTGGCAAGGATGCCGGTAGAAGGATTTACTTCGGAGAGGGTTATTTCAGATAAAAAAAATCCTTAGCTTTCGCTAAGGATGATTTCTGGCAGGGGCGGAGAGACTCGAACTCCCAACACCCGGTTTTGGAGACCGGTGCTCTACCAATTGA > NC_007779/3689513‑3689713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |