Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077793,731,0411.→T 1.9% 14.3 ‑0.4 ‑0.0268intergenic (+91/‑43)bglG/bglFtranscriptional antiterminator of the bgl operon/PTS system beta‑glucoside‑specific transporter subunits IIABC
Rejected: Polymorphic indel expands or contracts a homopolymer stretch.
Reads supporting (aligned to +/- strand):  new base (2/3):  ref base (145/118):  total (147/121)
Fisher's exact test strand distribution p-value = 6.61e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.98e-01

Only 100 of 306 total aligned reads displayed.

AGAACACTGAAATATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGA  >  NC_007779/3730941‑3731141
                                                                                                     |                                                                                                     
aGAACACTGAAATATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCACAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAgg                                                                                                        >  1:1931881/1‑101 (MQ=255)
aGAACACTGAAATATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAgg                                                                                                        >  1:5657287/1‑101 (MQ=255)
 gAACACTGAAATATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑t                                                                                                      <  1:11620673/101‑1 (MQ=255)
  aaCACTGAAATATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCACAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑tt                                                                                                     >  1:562024/1‑101 (MQ=255)
  aaCACTGAAATATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑tt                                                                                                     <  1:7003534/101‑1 (MQ=255)
  aaCACTGAAATATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑tt                                                                                                     >  1:9280662/1‑101 (MQ=255)
  aaCACTGAAATATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑tt                                                                                                     <  1:2329575/101‑1 (MQ=255)
  aaCACTGAAATATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGACTCACGTCAGGCCGTTTTTTTCAGG‑tt                                                                                                     <  1:11542221/101‑1 (MQ=255)
   acacTGAAATATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑ttt                                                                                                    <  1:7808461/101‑1 (MQ=255)
    cacTGAAATATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑tttt                                                                                                   >  1:8390379/1‑101 (MQ=255)
    cacTGAAATATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑tttt                                                                                                   <  1:11277272/101‑1 (MQ=255)
     acTGAAATATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑ttttt                                                                                                  >  1:2253852/1‑101 (MQ=255)
       tGAAATATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑ttttttt                                                                                                >  1:2504154/1‑101 (MQ=255)
         aaaTATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑tttttttt‑t                                                                                             >  1:8012523/1‑101 (MQ=255)
          aaTATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑Tg                                                                                            <  1:87612/101‑1 (MQ=255)
          aaTATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑Tg                                                                                            <  1:4060803/101‑1 (MQ=255)
           atatTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑Tgg                                                                                           >  1:2474415/1‑101 (MQ=255)
             attattACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAg                                                                                         >  1:1434527/1‑101 (MQ=255)
              ttattaCTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGt                                                                                        <  1:7708355/101‑1 (MQ=255)
              ttattaCTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGt                                                                                        >  1:5990034/1‑101 (MQ=255)
              ttattaCTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGt                                                                                        <  1:11725766/101‑1 (MQ=255)
               tattaCTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGtt                                                                                       >  1:1224580/1‑101 (MQ=255)
               tattaCTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGtt                                                                                       <  1:11180000/101‑1 (MQ=255)
                attaCTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGttt                                                                                      <  1:6914577/101‑1 (MQ=255)
                attaCTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGttt                                                                                      >  1:9459469/1‑101 (MQ=255)
                  taCTGAGTAAAGGATTGTTACCGCACTAAGCGAGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTg                                                                                    <  1:8217264/101‑1 (MQ=255)
                   aCTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGc                                                                                   >  1:2858521/1‑101 (MQ=255)
                   aCTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGc                                                                                   <  1:827578/101‑1 (MQ=255)
                    cTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGcc                                                                                  >  1:4245792/1‑101 (MQ=255)
                    cTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGcc                                                                                  <  1:5736408/101‑1 (MQ=255)
                    cTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGcc                                                                                  >  1:1785069/1‑101 (MQ=255)
                     tGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCg                                                                                 <  1:3457370/101‑1 (MQ=255)
                     tGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCg                                                                                 <  1:7349797/101‑1 (MQ=255)
                        gTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCaa                                                                              <  1:10833965/101‑1 (MQ=255)
                          taaGGATTGTTACCCCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTTATTCACGTCAGGCCGTTTTTTTCCGGTTTTTTTTT‑TGGAGTTTTGCCGCaaa                                                                             <  1:7202729/100‑1 (MQ=255)
                          aaaGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGTAGTTTTGCCGCcaaa                                                                            >  1:204222/1‑100 (MQ=255)
                          aaaGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAg                                                                            >  1:7495442/1‑101 (MQ=255)
                           aaGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGc                                                                           <  1:9133827/101‑1 (MQ=255)
                             ggATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCgg                                                                         >  1:9581954/1‑101 (MQ=255)
                               aTTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTa                                                                       >  1:10122050/1‑101 (MQ=255)
                                ttGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTag                                                                      >  1:678355/1‑101 (MQ=255)
                                   ttACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAgg                                                                   <  1:8614273/101‑1 (MQ=255)
                                     aCCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGc                                                                 >  1:6425240/1‑101 (MQ=255)
                                      ccGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCa                                                                >  1:11787586/1‑101 (MQ=255)
                                          aCTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGtt                                                            >  1:11416025/1‑101 (MQ=255)
                                           cTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTa                                                           <  1:9727176/101‑1 (MQ=255)
                                            tAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTAt                                                          >  1:9863693/1‑101 (MQ=255)
                                            tAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTAt                                                          <  1:4190389/101‑1 (MQ=255)
                                            tAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTAt                                                          >  1:881445/1‑101 (MQ=255)
                                              aGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGa                                                        >  1:5016745/1‑101 (MQ=255)
                                              aGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGa                                                        >  1:649113/1‑101 (MQ=255)
                                              aGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGa                                                        <  1:7888356/101‑1 (MQ=255)
                                              aGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGa                                                        <  1:2626295/101‑1 (MQ=255)
                                                cGGGCAAAACCTG‑AAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACgg                                                     >  1:11970473/1‑101 (MQ=255)
                                                    cAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGt                                                  >  1:2187788/1‑101 (MQ=255)
                                                     aaaaCCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGtt                                                 <  1:10496481/101‑1 (MQ=255)
                                                      aaaCCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTa                                                >  1:10394440/1‑101 (MQ=255)
                                                      aaaCCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTa                                                >  1:9556888/1‑101 (MQ=255)
                                                       aaCCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAg                                               >  1:4283061/1‑101 (MQ=255)
                                                        aCCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGc                                              >  1:1541148/1‑101 (MQ=255)
                                                        aCCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGc                                              <  1:4827252/101‑1 (MQ=255)
                                                        aCCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGc                                              >  1:129061/1‑101 (MQ=255)
                                                         ccTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGcc                                             <  1:1032954/101‑1 (MQ=255)
                                                          cTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCa                                            >  1:7104980/1‑101 (MQ=255)
                                                           tGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAg                                           <  1:3738492/101‑1 (MQ=255)
                                                             aaaaaaaTTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGaa                                         >  1:8486678/1‑101 (MQ=255)
                                                              aaaaaaTTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGaaa                                        <  1:2757894/101‑1 (MQ=255)
                                                                aaaaTTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGaaaaa                                      >  1:8695594/1‑101 (MQ=255)
                                                                aaaaTTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGaaaaa                                      <  1:10010643/101‑1 (MQ=255)
                                                                 aaaTTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAAt                                     <  1:5137491/101‑1 (MQ=255)
                                                                  atttGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATa                                    <  1:6139978/99‑1 (MQ=255)
                                                                   aTTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTTATGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATa                                    <  1:10997987/101‑1 (MQ=255)
                                                                   aTTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAg                                   <  1:3658726/101‑1 (MQ=255)
                                                                     tGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTc                                 <  1:10937432/101‑1 (MQ=255)
                                                                     tGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTc                                 >  1:10579143/1‑101 (MQ=255)
                                                                     tGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTc                                 >  1:3320311/1‑101 (MQ=255)
                                                                        ttGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCa                              <  1:4486968/101‑1 (MQ=255)
                                                                         tGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAg                             >  1:5069948/1‑101 (MQ=255)
                                                                             tCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAgc                         >  1:3154896/1‑100 (MQ=255)
                                                                             tCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGt                         <  1:6292378/101‑1 (MQ=255)
                                                                              cACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTc                        <  1:12054086/101‑1 (MQ=255)
                                                                                 gTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCggg                     <  1:11876679/101‑1 (MQ=255)
                                                                                  tCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCgggg                    >  1:8998468/1‑101 (MQ=255)
                                                                                   cAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCggggg                   >  1:583115/1‑101 (MQ=255)
                                                                                   cAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCggggg                   >  1:6204243/1‑101 (MQ=255)
                                                                                   cAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCggggg                   >  1:3943810/1‑101 (MQ=255)
                                                                                    aGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGgc                  <  1:6651262/101‑1 (MQ=255)
                                                                                    aGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGgc                  <  1:904357/101‑1 (MQ=255)
                                                                                     ggCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGgcg                 >  1:4369036/1‑101 (MQ=255)
                                                                                       ccGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCa               >  1:7656479/1‑101 (MQ=255)
                                                                                             ttttCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTTGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAAc         >  1:8156898/1‑101 (MQ=255)
                                                                                             ttttCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAAc         >  1:5325066/1‑101 (MQ=255)
                                                                                              tttCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACa        >  1:3800975/1‑101 (MQ=255)
                                                                                               ttCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACAt       >  1:302359/1‑101 (MQ=255)
                                                                                                tCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACAtt      >  1:693890/1‑101 (MQ=255)
                                                                                                 cAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATtg     >  1:11689960/1‑101 (MQ=255)
                                                                                                 cAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATtg     >  1:6382594/1‑101 (MQ=255)
                                                                                                  aGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATtgt    >  1:7605732/1‑101 (MQ=255)
                                                                                                   gg‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATtgtg   <  1:9385395/101‑1 (MQ=255)
                                                                                                    g‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGa  >  1:10648027/1‑101 (MQ=255)
                                                                                                     |                                                                                                     
AGAACACTGAAATATTATTACTGAGTAAAGGATTGTTACCGCACTAAGCGGGCAAAACCTGAAAAAAATTGCTTGATTCACGTCAGGCCGTTTTTTTCAGG‑TTTTTTTT‑TGGAGTTTTGCCGCAAAGCGGTAGAGGGCAAGTTATGACGGAGTTAGCCAGAAAAATAGTCGCAGGAGTCGGGGGCGCAGATAACATTGTGA  >  NC_007779/3730941‑3731141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.