| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 4,200,831 | 1 | .→G | 0.7% | 2.5 ‑1.5 ‑0.0 | 272 | intergenic (+31/‑76) | rplQ/yhdN | 50S ribosomal protein L17/hypothetical protein |
| Rejected: Polymorphism prediction not supported by minimum number of reads on both strands. | ||||||||||
| Rejected: Polymorphic indel expands or contracts a homopolymer stretch. | ||||||||||
| Reads supporting (aligned to +/- strand): new base (2/0): ref base (128/142): total (130/142) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.28e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.96e-01 | ||||||||||
Only 100 of 297 total aligned reads displayed.
CGACAACGCGCCGATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACTTGACCAGTGGGCAG > NC_007779/4200731‑4200931 | gACAACGCGCCGATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAACCCCGCCCcggc‑g < 1:1118819/101‑1 (MQ=255) gACAACGCGCCGATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCcggc‑g > 1:4830094/1‑101 (MQ=255) gACAACGCGCCGATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCcggc‑g > 1:4548310/1‑101 (MQ=255) gACAACGCGCCGATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCcggc‑g > 1:9316608/1‑101 (MQ=255) aCAACGCGCCGATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCcggc‑gg < 1:1903392/101‑1 (MQ=255) aaCGCGCCGATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGt > 1:3666822/1‑101 (MQ=255) gcgcCGATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGtttt > 1:2885504/1‑101 (MQ=255) gcgcCGATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGtttt < 1:7571986/101‑1 (MQ=255) cgcCGATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGttttt < 1:11499726/101‑1 (MQ=255) gcCGATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGtttttt > 1:3909066/1‑101 (MQ=255) gcCGATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGtttttt < 1:3427824/101‑1 (MQ=255) gcCGATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGtttttt > 1:3211467/1‑101 (MQ=255) cggatgctttACAGGGAGCTGGTGGATCGTTGAGAGAAAGAAGAAGCTGCGGCAGATTAATCGGA‑‑AGAAACAAAAAAAAACCCGCCCCGGC‑GGGttttttt < 1:10237583/93‑1 (MQ=255) gATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTtat < 1:11225795/101‑1 (MQ=255) aTGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTtata > 1:9411604/1‑101 (MQ=255) tGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATAc < 1:11981497/101‑1 (MQ=255) ttACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCgt > 1:7454723/1‑101 (MQ=255) aTCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAACCCCGCCCCGGC‑GGGTTTTTTTATACCCgtagta < 1:10968258/101‑1 (MQ=255) aTCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCgtagta > 1:9099049/1‑101 (MQ=255) tCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTAt < 1:10937743/101‑1 (MQ=255) gagtgggTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAACCCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATcc < 1:206683/96‑1 (MQ=255) gAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGGTTTTTTTTACCCCTCGTATcc > 1:8629126/1‑101 (MQ=255) gAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGGTGTTTTATACCCCCAGTAAcc > 1:100039/1‑101 (MQ=255) gCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATcccc > 1:3995329/1‑101 (MQ=255) cTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCa > 1:10540117/1‑101 (MQ=255) cTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCa < 1:5335515/101‑1 (MQ=255) ggTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACt < 1:4798020/101‑1 (MQ=255) gTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACtt < 1:7345700/101‑1 (MQ=255) ttGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTa > 1:11900241/1‑101 (MQ=255) tGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTAt > 1:5025969/1‑101 (MQ=255) tCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAACCCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTa < 1:9694001/101‑1 (MQ=255) cGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTAc > 1:1485805/1‑101 (MQ=255) gTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGTAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACa > 1:11413537/1‑101 (MQ=255) ttCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACaa < 1:3306592/101‑1 (MQ=255) ttCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACaa > 1:6668591/1‑101 (MQ=255) ttCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACaa > 1:11362127/1‑101 (MQ=255) tctgagaAAGCAGAAGGTGCTGCAGAGAAAAATGAAGAGCAATGAAAAAACGCCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACa < 1:4928177/98‑1 (MQ=255) cAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATa < 1:8759907/101‑1 (MQ=255) agagAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAg > 1:12055826/1‑101 (MQ=255) aaagaAAGAAGAAGCGTCTGAAGAGTAATCTGA‑‑AGCAAAGAAAAAACACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAg < 1:8168248/99‑1 (MQ=255) gagaAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCTGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGc < 1:4132996/101‑1 (MQ=255) gagaAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGc > 1:10692499/1‑101 (MQ=255) agaAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCt < 1:9177302/101‑1 (MQ=255) aaaaaGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAACCCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCt < 1:8486837/99‑1 (MQ=255) aaaGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGt < 1:11931228/101‑1 (MQ=255) aaGCAGAAGCTGCTGCAGAGTAATCTGA‑‑ACCAACGTAAAAAAACCCGCCCCGGC‑GGGTTGTTTTATACCCGTAGTATCACCACCTATCTACCATAGCTGTa > 1:7160262/1‑101 (MQ=255) cAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTActc > 1:546804/1‑101 (MQ=255) aGAAGTTGCTGCAGAGTAATCGAA‑‑AGAAACAAAAAAAACCCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTActct < 1:6235812/101‑1 (MQ=255) aGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTActct > 1:6971637/1‑101 (MQ=255) gAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCtt < 1:7730628/101‑1 (MQ=255) gAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCtt < 1:11817467/101‑1 (MQ=255) aGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAACCCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCtttt < 1:6368245/101‑1 (MQ=255) gctgctGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCttttt > 1:1591936/1‑101 (MQ=255) ctgctgCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTg < 1:5258146/101‑1 (MQ=255) tgctgcAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGt < 1:9514879/101‑1 (MQ=255) gctgcAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTTTACCCCTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGtt > 1:8610663/1‑101 (MQ=255) ctgcAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTc > 1:5908661/1‑101 (MQ=255) tgcAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCa > 1:219908/1‑101 (MQ=255) tgcAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCa > 1:4430166/1‑101 (MQ=255) tgcAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGGTTTTTTATACCCGTAGTATCCCCCCTTATCTACAATAGCTGTACTCTTTTTGTTCa > 1:2319285/1‑101 (MQ=255) cAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATc < 1:7834422/101‑1 (MQ=255) cAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGGTTTTTTTTTCCCCCAGTTTCCCCACTTATCTACCATATCTGTACTCTTTTTGTTTAtt > 1:10352867/1‑100 (MQ=255) agagTAATCTGA‑‑AGCAACGTAAAAAACCCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATcc < 1:8734444/101‑1 (MQ=255) agagTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGGTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATcc > 1:311074/1‑101 (MQ=255) gagTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATccc < 1:5860670/101‑1 (MQ=255) gagTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATccc > 1:10851734/1‑101 (MQ=255) gTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGCTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTTTTCATCCCCt > 1:9632132/1‑101 (MQ=255) tAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATTTACAATAGCTGTACTCTTTTTTTTCATCCCCTg > 1:563505/1‑101 (MQ=255) tAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTg > 1:8977821/1‑101 (MQ=255) tAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGGTTTTTTTTAACCGTAGTATTCCCACTTATCTACAATAGCTGTACTCTTTTTTTTCATCCCCTg > 1:10061218/1‑101 (MQ=255) aaTCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGGTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTgg > 1:2567337/1‑101 (MQ=255) aTCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGCGGGGTTTTTTTTTACCCGTAGTATCCCCCCTTATCAACAATAGCTGTACTCTTTTTTTTCTTCCCCTgg > 1:2926088/1‑101 (MQ=255) aTCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGa < 1:5121404/101‑1 (MQ=255) tCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAg < 1:9493159/101‑1 (MQ=255) a‑‑aGAAACGAAAAAAACCCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTAtt < 1:134883/101‑1 (MQ=255) gCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATATACAATAGCTGTACTCTTTTTGTTCATCCCCTCGAGTAtttt > 1:3008296/1‑100 (MQ=255) cAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTAt > 1:6793671/1‑101 (MQ=255) acttAAAAAACCCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTAtgt < 1:4281220/98‑1 (MQ=255) ttAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTgg > 1:11779361/2‑101 (MQ=255) gTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTgg > 1:3052820/1‑101 (MQ=255) aaaaaaCCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTa > 1:979877/1‑101 (MQ=255) aaaacCCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTAc < 1:10115411/101‑1 (MQ=255) aaaaaCCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTAc > 1:7953337/1‑101 (MQ=255) aaaaCCCGCCCCGGC‑GGGGTTTTTTATACCCGGAGGATCCCCCCCTATCTACAATAGCTTTACTCTTTTTGTTCATCCCCCGGAGGATTTATGTGGTTACt > 1:8834202/1‑101 (MQ=255) aaaCCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACtt > 1:9211665/1‑101 (MQ=255) aaaCCCGCCCCGGC‑GGGTTTTTTTATACCCGGAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACtt > 1:10738445/1‑101 (MQ=255) aCCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACTTGa < 1:5177269/101‑1 (MQ=255) cGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACTTGACCa < 1:1089316/101‑1 (MQ=255) ccccGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACTTGACCAGt < 1:141817/101‑1 (MQ=255) ccccGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACTTGACCAGt > 1:3742136/1‑101 (MQ=255) ccccGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACTTGACCAGt > 1:5321764/1‑101 (MQ=255) cccGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTTCTCGACCAGTg > 1:4685191/1‑101 (MQ=255) cccGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACTTGACCAGTg < 1:6509909/101‑1 (MQ=255) cccGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACTTGACCAGTg > 1:4876463/1‑101 (MQ=255) ccGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACTTGACCAGTgg > 1:2745268/1‑101 (MQ=255) ccGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACTTGACCAGTgg < 1:6114403/101‑1 (MQ=255) ccGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACTTGACCAGTgg < 1:5060651/101‑1 (MQ=255) ggc‑ggGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACTTGACCAGTGGGc > 1:10584505/1‑101 (MQ=255) gc‑ggGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACTTGACCAGTGGGCa < 1:2483902/101‑1 (MQ=255) c‑ggGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACTTGACCAGTGGGCag > 1:3284230/1‑101 (MQ=255) | CGACAACGCGCCGATGGCTTACATCGAGCTGGTTGATCGTTCAGAGAAAGCAGAAGCTGCTGCAGAGTAATCTGA‑‑AGCAACGTAAAAAAACCCGCCCCGGC‑GGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTTGTTCATCCCCTGGAGTATTTATGTGGTTACTTGACCAGTGGGCAG > NC_007779/4200731‑4200931 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |