Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_007779	4,214,399	0	T→A	100.0%	‑0.5	1	noncoding (767/2904 nt)	rrlE	23S ribosomal RNA
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (0/0):  ref base (1/0):  total (1/0)

ATGACTTGTGGCTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAATTCATCTCCGGGGGTAG  >  NC_007779/4214393‑4214494       |                                                                                                aTGACTTGTGGCTGGGGGTGAAAGGCCAATCAAACCGGGGAATAG‑TGGTTTTCCCCCAAAGCTATTTAGGGAGCGCCCCGGGCATTTAATCCCggggggaa  >  1:3648186/1‑98 (MQ=0)       |                                                                                                ATGACTTGTGGCTGGGGGTGAAAGGCCAATCAAACCGGGAGATAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAATTCATCTCCGGGGGTAG  >  NC_007779/4214393‑4214494

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.