| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 4,345,370 | 1 | .→T | 0.7% | 2.8 0.0 ‑0.4 | 276 | intergenic (‑168/+28) | adiA/melR | biodegradative arginine decarboxylase/DNA‑binding transcriptional dual regulator |
| Rejected: Polymorphism prediction not supported by minimum number of reads on both strands. | ||||||||||
| Rejected: Polymorphic indel expands or contracts a homopolymer stretch. | ||||||||||
| Reads supporting (aligned to +/- strand): new base (2/0): ref base (189/85): total (191/85) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.60e-01 | ||||||||||
Only 100 of 310 total aligned reads displayed.
CGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGACATGCCGACATATTTG > NC_007779/4345270‑4345470 | cgcgTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTa < 1:590447/101‑1 (MQ=255)cgcgTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTa < 1:8417952/101‑1 (MQ=255) cgTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑tt > 1:2943547/1‑101 (MQ=255) gTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑ttt > 1:6308503/1‑101 (MQ=255) tGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑tttt > 1:4302114/1‑101 (MQ=255) gAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑ttttt < 1:4095153/101‑1 (MQ=255) gAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑ttttt > 1:3396839/1‑101 (MQ=255) aaaaaCAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑tttttt > 1:11709078/1‑101 (MQ=255) aaaaaCAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑tttttt > 1:6209355/1‑101 (MQ=255) aaaaCAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑ttttttt < 1:8233248/101‑1 (MQ=255) aaaaCAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑ttttttt > 1:3730497/1‑101 (MQ=255) caaacaTTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGct < 1:10828933/101‑1 (MQ=255) aacaTTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGctga > 1:7395556/1‑101 (MQ=255) acaTTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGctgat > 1:9591549/1‑101 (MQ=255) caTTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGctgata > 1:10436319/1‑101 (MQ=255) tttttGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGctgatact > 1:4067592/1‑101 (MQ=255) tttttGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGctgatact > 1:1301114/1‑101 (MQ=255) ttttGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGctgatactg > 1:10146379/1‑101 (MQ=255) ttGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGctgatactgat > 1:9669510/1‑101 (MQ=255) ttGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGctgatactgat > 1:7488237/1‑101 (MQ=255) gAAATATTTAGTTTTATAAACAATACGTTATGGGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGatat > 1:5665193/1‑101 (MQ=255) aaaTATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATc > 1:6567081/1‑101 (MQ=255) atatTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGt > 1:5553876/1‑101 (MQ=255) atatTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGt > 1:9077490/1‑101 (MQ=255) atTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCt > 1:2688805/1‑101 (MQ=255) atTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCt < 1:7664771/101‑1 (MQ=255) atTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCt > 1:3284176/1‑101 (MQ=255) tttAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCtt < 1:10494117/101‑1 (MQ=255) tttAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCtt > 1:5748504/1‑101 (MQ=255) ttAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTTGGTTGATACTGATATCTTCtt > 1:8057309/1‑101 (MQ=255) tAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTa > 1:11264026/1‑101 (MQ=255) tAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTa < 1:1379146/101‑1 (MQ=255) gTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGc < 1:5184140/101‑1 (MQ=255) ttttATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGcc > 1:3050206/1‑101 (MQ=255) ttttATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGcc > 1:9834987/1‑101 (MQ=255) ttATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCgg > 1:600874/1‑101 (MQ=255) ttATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTGTGGCTGATACTGATATCGTCTTTAGCCgg > 1:3541776/1‑101 (MQ=255) tataAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCggg > 1:4452028/1‑101 (MQ=255) tataAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCggg > 1:9237420/1‑101 (MQ=255) aaaCAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGaaa < 1:5771523/101‑1 (MQ=255) aaaCAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGaaa > 1:3829136/1‑101 (MQ=255) aCAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAATCTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACg > 1:7198142/1‑101 (MQ=255) cAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGt < 1:11573037/101‑1 (MQ=255) aTACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCt < 1:4740677/101‑1 (MQ=255) aTACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCt > 1:2969473/1‑101 (MQ=255) gTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTggcg < 1:12005745/101‑1 (MQ=255) gTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTggcg < 1:10280730/101‑1 (MQ=255) gTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTggcg < 1:1923269/101‑1 (MQ=255) gTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTggcg < 1:4846930/101‑1 (MQ=255) tATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTggcggc < 1:8484383/101‑1 (MQ=255) tATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTggcggc > 1:1726368/1‑101 (MQ=255) aTGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGgcggcg < 1:7624635/101‑1 (MQ=255) gtgATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCt > 1:5454465/1‑101 (MQ=255) gATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGt < 1:443339/101‑1 (MQ=255) attattTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGtt > 1:6735593/1‑101 (MQ=255) attattTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGtt > 1:6451333/1‑101 (MQ=255) attattTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGtt > 1:5680810/1‑101 (MQ=255) attattTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGtt > 1:10648884/1‑101 (MQ=255) tattTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTgg > 1:7312218/1‑101 (MQ=255) attTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGc > 1:9169959/1‑101 (MQ=255) ttAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTaa < 1:7175578/101‑1 (MQ=255) tAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAg < 1:11077524/101‑1 (MQ=255) tAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAg > 1:4952500/1‑101 (MQ=255) tAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAg > 1:458106/1‑101 (MQ=255) aaaTTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGt > 1:2606908/1‑101 (MQ=255) aaTTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGtt > 1:10351045/1‑101 (MQ=255) attattTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGttt > 1:8970065/1‑101 (MQ=255) tattTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGc > 1:2318515/1‑101 (MQ=255) attTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCg > 1:7459310/1‑101 (MQ=255) attTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCg > 1:425736/1‑101 (MQ=255) ttttCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCgg > 1:831973/1‑101 (MQ=255) tCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTAt > 1:7569614/1‑101 (MQ=255) cACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTAtt > 1:11866631/1‑101 (MQ=255) cACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTAtt < 1:11445803/101‑1 (MQ=255) cACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTAtt > 1:884353/1‑101 (MQ=255) aCTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTAttg > 1:10752205/1‑101 (MQ=255) cTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTAttgt < 1:1845079/101‑1 (MQ=255) gCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTAttgttg > 1:2263257/1‑101 (MQ=255) gCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTAttgttg > 1:8713215/1‑101 (MQ=255) cTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTgc < 1:3094361/101‑1 (MQ=255) ttattaTCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTgcg > 1:10718777/1‑101 (MQ=255) attatCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTgcggc < 1:2738506/101‑1 (MQ=255) atCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGAc > 1:7899146/1‑101 (MQ=255) atCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGAc > 1:8535923/1‑101 (MQ=255) accGACGTCTAACCTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACATCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGAc < 1:392619/99‑1 (MQ=255) cGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGAAAt < 1:5121857/101‑1 (MQ=255) gACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGATATg > 1:9529054/1‑101 (MQ=255) gACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGACATg > 1:2125376/1‑101 (MQ=255) gCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGACATGCCGa > 1:11003222/1‑101 (MQ=255) tAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGACATGCCGACa > 1:989247/1‑101 (MQ=255) aaCTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGACATGCCGACata < 1:3612829/101‑1 (MQ=255) aCTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGACATGCCGACatat > 1:11954377/1‑101 (MQ=255) aCTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGACATGCCGACatat < 1:664976/101‑1 (MQ=255) cTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGACATGCCGACATAtt < 1:7089294/101‑1 (MQ=255) cTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGACATGCCGACATAtt > 1:9444059/1‑101 (MQ=255) a‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGACATGCCGACATATTTg < 1:7824777/101‑1 (MQ=255) a‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGACATGCCGACATATTTg > 1:2353061/1‑101 (MQ=255) a‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGACATGCCGACATATTTg > 1:5015851/1‑101 (MQ=255) a‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGACATGCCGACATATTTg < 1:3240350/101‑1 (MQ=255) a‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGACATGCCGACATATTTg > 1:4172281/1‑101 (MQ=255) | CGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTA‑TTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAGTTTGCGGTATTGTTGCGGCGACATGCCGACATATTTG > NC_007779/4345270‑4345470 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |