| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,750,123 | C→T | 4.4% | G122S (GGC→AGC) | tnaA ← | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,750,123 | 0 | C→T | 4.4% | 20.8 ‑0.6 ‑0.0 | 260 | G122S (GGC→AGC) | tnaA | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| Reads supporting (aligned to +/- strand): new base (5/7): ref base (128/119): total (134/126) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.63e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.67e-01 | ||||||||||
Only 100 of 275 total aligned reads displayed.
ATAGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCCTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGATATTT > NC_007779/3750025‑3750223 | ataGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTtt > 1:8379929/1‑101 (MQ=255) taGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTttt > 1:5459626/1‑101 (MQ=255) taGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTttt < 1:6763679/101‑1 (MQ=255) gACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTttttc > 1:10668346/1‑100 (MQ=255) cGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCt < 1:10481601/101‑1 (MQ=255) gTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTg > 1:2522593/1‑101 (MQ=255) ttACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGc > 1:1493997/1‑101 (MQ=255) tACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGttttt < 1:9044674/101‑1 (MQ=255) tACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGttttt < 1:3254475/101‑1 (MQ=255) cAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTa < 1:5679723/101‑1 (MQ=255) cAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTa > 1:7260635/1‑101 (MQ=255) cAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTa > 1:1184732/1‑101 (MQ=255) cAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTa > 1:1163602/1‑101 (MQ=255) gCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAAt < 1:239922/101‑1 (MQ=255) ccGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATc > 1:2656894/1‑101 (MQ=255) cGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCa < 1:1766619/101‑1 (MQ=255) gTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAg < 1:6553543/101‑1 (MQ=255) ttGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGt < 1:8031707/101‑1 (MQ=255) ttGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGt > 1:5756902/1‑101 (MQ=255) tGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTa > 1:6343061/1‑101 (MQ=255) aTCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTAcc > 1:3434687/1‑101 (MQ=255) tGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGa > 1:7556873/1‑101 (MQ=255) tGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGa < 1:8255394/101‑1 (MQ=255) ggCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGaa > 1:5997819/1‑101 (MQ=255) cTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAata > 1:11326608/1‑101 (MQ=255) cTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAata < 1:10025628/101‑1 (MQ=255) tATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAatat < 1:3675953/101‑1 (MQ=255) aTGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAAtata > 1:3357101/1‑101 (MQ=255) aTGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAAtata > 1:2365398/1‑101 (MQ=255) aTGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAAtata > 1:5605076/1‑101 (MQ=255) tGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAg < 1:8108438/101‑1 (MQ=255) ggCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGa < 1:4127250/101‑1 (MQ=255) ccTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGAttt < 1:425997/101‑1 (MQ=255) cTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTg < 1:9383794/101‑1 (MQ=255) cTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTg < 1:262254/101‑1 (MQ=255) tGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGc < 1:9340132/101‑1 (MQ=255) tGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGc < 1:11310139/101‑1 (MQ=255) gTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGctct > 1:5036587/1‑101 (MQ=255) tGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTg < 1:2500000/101‑1 (MQ=255) tGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTg < 1:6049498/101‑1 (MQ=255) ggTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTgc > 1:6102306/1‑101 (MQ=255) gTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTgcg < 1:4983030/101‑1 (MQ=255) tATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTgcgc < 1:6427304/101‑1 (MQ=255) aTCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCC‑GCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCa < 1:2114415/101‑1 (MQ=255) cAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCAc > 1:1024750/1‑101 (MQ=255) aaaGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACg > 1:2013107/1‑101 (MQ=255) aGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGc > 1:8637626/1‑101 (MQ=255) gAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGcc < 1:6638171/101‑1 (MQ=255) tAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTgg > 1:2851802/1‑101 (MQ=255) aGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGt > 1:9804512/1‑101 (MQ=255) aGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGt < 1:5834944/101‑1 (MQ=255) gTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTg > 1:1630101/1‑101 (MQ=255) ttAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGa > 1:2242247/1‑101 (MQ=255) tAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAg > 1:4585791/1‑101 (MQ=255) agagAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGt < 1:4638249/101‑1 (MQ=255) agagAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGt > 1:6134051/1‑101 (MQ=255) gagaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTc > 1:10402537/1‑101 (MQ=255) gagaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTc < 1:5669889/101‑1 (MQ=255) agaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCg < 1:4771343/101‑1 (MQ=255) agaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCg > 1:187045/1‑101 (MQ=255) agaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGCCCCTGGTGAGTCg > 1:734830/1‑101 (MQ=255) gaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCgg > 1:5915497/1‑101 (MQ=255) gaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCgg > 1:6408435/1‑101 (MQ=255) aaCGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGa < 1:10541772/101‑1 (MQ=255) aaCGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGa > 1:8324465/1‑101 (MQ=255) aaCGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGa < 1:11237314/101‑1 (MQ=255) aaCGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGa > 1:1341737/1‑101 (MQ=255) aCGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGaa > 1:5960113/1‑101 (MQ=255) cGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAAt > 1:10940169/1‑101 (MQ=255) cGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAAt < 1:1799326/101‑1 (MQ=255) caccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGTAATGgt < 1:8515954/101‑1 (MQ=255) caccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgt < 1:11940499/101‑1 (MQ=255) caccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgt > 1:7456691/1‑101 (MQ=255) caccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgt > 1:11974208/1‑101 (MQ=255) accaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtg < 1:4401396/101‑1 (MQ=255) accaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtg < 1:7802305/101‑1 (MQ=255) ccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtgt < 1:2138529/101‑1 (MQ=255) caTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTa > 1:3799347/1‑101 (MQ=255) caTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTa > 1:8897456/1‑101 (MQ=255) aTTTTGCTGCGATCCAGG‑CTTTTACCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTAt > 1:10805748/1‑101 (MQ=255) tgctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGAt < 1:4798106/101‑1 (MQ=255) tgctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGAt > 1:6190363/1‑101 (MQ=255) tgctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGAt > 1:4907064/1‑101 (MQ=255) gctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATa < 1:6703946/101‑1 (MQ=255) gctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATa < 1:9598015/101‑1 (MQ=255) gctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATa > 1:7003334/1‑101 (MQ=255) tgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAAc < 1:79297/101‑1 (MQ=255) tgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAAc < 1:2692041/101‑1 (MQ=255) tgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAAc > 1:889914/1‑101 (MQ=255) gcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAAcc > 1:9187649/1‑101 (MQ=255) cGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCa > 1:2960858/1‑101 (MQ=255) cGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCa < 1:11211017/101‑1 (MQ=255) cGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCa > 1:11531853/1‑101 (MQ=255) gATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaa > 1:3048966/1‑101 (MQ=255) aTCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaaa > 1:1109635/1‑101 (MQ=255) aggcTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGata > 1:5309409/4‑101 (MQ=255) aggcTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGata < 1:408444/98‑1 (MQ=255) gcTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGATAtt > 1:258896/2‑101 (MQ=255) cTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGATAttt < 1:11035712/101‑1 (MQ=255) cTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGATAttt < 1:1224744/101‑1 (MQ=255) | ATAGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCCTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGATATTT > NC_007779/3750025‑3750223 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |