Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,898,657 C→G 100% L259V (CTG→GTG)  yiaJ → DNA‑binding transcriptional repressor

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077793,898,6570C→G100.0% 1132.5 262L259V (CTG→GTG) yiaJDNA‑binding transcriptional repressor
Reads supporting (aligned to +/- strand):  new base (122/140):  ref base (0/0):  total (122/140)

Only 100 of 262 total aligned reads displayed.

CGGTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCACTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCAAAACT  >  NC_007779/3898559‑3898754
                                                                                                  |                                                                                                 
cGGTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCTATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTg                                                                                                 <  1:11997508/101‑1 (MQ=255)
 ggTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGc                                                                                                >  1:2500351/1‑101 (MQ=255)
   tgtTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGt                                                                                              <  1:11440756/101‑1 (MQ=255)
   tgtTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGt                                                                                              <  1:8316785/101‑1 (MQ=255)
   tgtTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGt                                                                                              <  1:11343602/101‑1 (MQ=255)
   tgtTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGt                                                                                              <  1:4885857/101‑1 (MQ=255)
    gtTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTg                                                                                             <  1:4467065/101‑1 (MQ=255)
       tGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGaaa                                                                                          <  1:1907659/101‑1 (MQ=255)
        gATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAAc                                                                                         >  1:753243/1‑101 (MQ=255)
         atatTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAAcc                                                                                        <  1:3584412/101‑1 (MQ=255)
         atatTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAAcc                                                                                        <  1:10079708/101‑1 (MQ=255)
          tatTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACcg                                                                                       >  1:9986994/1‑101 (MQ=255)
             tCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCgcgc                                                                                    >  1:5141341/1‑101 (MQ=255)
               aTGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAg                                                                                  <  1:11281782/101‑1 (MQ=255)
               aTGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAg                                                                                  <  1:10206098/101‑1 (MQ=255)
                tGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAgg                                                                                 <  1:12043804/101‑1 (MQ=255)
                 gggCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGc                                                                                >  1:1939146/1‑101 (MQ=255)
                  ggCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCt                                                                               >  1:4067078/1‑101 (MQ=255)
                  ggCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCt                                                                               >  1:10411904/1‑101 (MQ=255)
                  ggCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCt                                                                               >  1:8408496/1‑101 (MQ=255)
                   gCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTa                                                                              <  1:6008802/101‑1 (MQ=255)
                     gggTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTAtt                                                                            >  1:10048037/1‑101 (MQ=255)
                        tGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCt                                                                         <  1:11544477/101‑1 (MQ=255)
                         gCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTa                                                                        >  1:7505611/1‑101 (MQ=255)
                         gCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTa                                                                        <  1:10924685/101‑1 (MQ=255)
                          ccGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTaa                                                                       <  1:3170240/101‑1 (MQ=255)
                           cGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGGGCGTGAAACCGCGCAGGCTATTTCTAAt                                                                      <  1:292543/101‑1 (MQ=255)
                            gTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATg                                                                     >  1:2606291/1‑101 (MQ=255)
                             tACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGa                                                                    <  1:2861383/101‑1 (MQ=255)
                             tACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGa                                                                    >  1:6945887/1‑101 (MQ=255)
                              aCGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGaa                                                                   <  1:7668501/101‑1 (MQ=255)
                                  cGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTgg                                                               <  1:6722750/101‑1 (MQ=255)
                                  cGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTgg                                                               >  1:9786458/1‑101 (MQ=255)
                                   gtgtCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTggg                                                              >  1:8455232/1‑101 (MQ=255)
                                   gtgtCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTggg                                                              >  1:7160810/1‑101 (MQ=255)
                                   gtgtCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTggg                                                              >  1:1469218/1‑101 (MQ=255)
                                      tCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGAtt                                                           <  1:5823325/101‑1 (MQ=255)
                                      tCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGAtt                                                           <  1:8228372/101‑1 (MQ=255)
                                      tCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGAtt                                                           >  1:10433620/1‑101 (MQ=255)
                                      tCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGAtt                                                           <  1:7928400/101‑1 (MQ=255)
                                       cGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGAttt                                                          <  1:10288502/101‑1 (MQ=255)
                                       cGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGAttt                                                          <  1:9836494/101‑1 (MQ=255)
                                         aTTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTAc                                                        >  1:8634693/1‑101 (MQ=255)
                                           ttCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTg                                                      >  1:6453436/1‑101 (MQ=255)
                                             cGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTAAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTc                                                    >  1:9326169/1‑101 (MQ=255)
                                                tttCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAgg                                                 >  1:6526898/1‑101 (MQ=255)
                                                 ttCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAggg                                                <  1:2896535/101‑1 (MQ=255)
                                                 ttCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCACGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAggg                                                >  1:8161973/1‑101 (MQ=255)
                                                   cGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGAt                                              >  1:10718731/1‑101 (MQ=255)
                                                   cGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGAt                                              <  1:3062202/101‑1 (MQ=255)
                                                    gACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATg                                             <  1:1519938/101‑1 (MQ=255)
                                                    gACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATg                                             >  1:10238829/1‑101 (MQ=255)
                                                       aTCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGAcc                                          >  1:5897102/1‑101 (MQ=255)
                                                        tCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCt                                         <  1:5497437/101‑1 (MQ=255)
                                                          aCGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTgg                                       >  1:7780211/1‑101 (MQ=255)
                                                           cGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTggg                                      <  1:6074460/101‑1 (MQ=255)
                                                           cGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTggg                                      <  1:6289871/101‑1 (MQ=255)
                                                            gTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCGGGGATGACCTGGgc                                     <  1:4337274/101‑1 (MQ=255)
                                                            gTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGgc                                     <  1:11621541/101‑1 (MQ=255)
                                                            gTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGgc                                     <  1:4203746/101‑1 (MQ=255)
                                                            gTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGgc                                     <  1:785719/101‑1 (MQ=255)
                                                             tCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGgcg                                    >  1:1865455/1‑101 (MQ=255)
                                                              cTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGgcgc                                   <  1:8757461/101‑1 (MQ=255)
                                                               tGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGcgcg                                  <  1:8835648/101‑1 (MQ=255)
                                                               tGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGcgcg                                  >  1:2377175/1‑101 (MQ=255)
                                                                gAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGa                                 <  1:1415408/101‑1 (MQ=255)
                                                                 aaaCAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGAt                                <  1:2007129/101‑1 (MQ=255)
                                                                    cAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATcac                             <  1:4820361/101‑1 (MQ=255)
                                                                     aGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATcaca                            <  1:4707825/101‑1 (MQ=255)
                                                                     aGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATcaca                            >  1:8530574/1‑101 (MQ=255)
                                                                     aGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATcaca                            <  1:385938/101‑1 (MQ=255)
                                                                      ggTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACAt                           <  1:5309678/101‑1 (MQ=255)
                                                                      ggTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACAt                           >  1:1389743/1‑101 (MQ=255)
                                                                       gTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATa                          <  1:1444420/101‑1 (MQ=255)
                                                                         gtgggagaGAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAAc                        <  1:11081460/97‑1 (MQ=255)
                                                                         gggAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAAc                        <  1:184224/101‑1 (MQ=255)
                                                                         gggAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAAc                        >  1:11200755/1‑101 (MQ=255)
                                                                              agaAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCttt                   <  1:948095/101‑1 (MQ=255)
                                                                              agaAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCttt                   >  1:2307983/1‑101 (MQ=255)
                                                                               gaAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTg                  >  1:5686749/1‑101 (MQ=255)
                                                                               gaAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTg                  >  1:7320375/1‑101 (MQ=255)
                                                                               gaAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTg                  >  1:10857781/1‑101 (MQ=255)
                                                                                   aaTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACa              >  1:7965079/1‑101 (MQ=255)
                                                                                   aaTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACa              <  1:9738588/101‑1 (MQ=255)
                                                                                    aTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACaa             <  1:9086648/101‑1 (MQ=255)
                                                                                     tctcCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAg            >  1:9607619/1‑101 (MQ=255)
                                                                                       tcCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTg          <  1:5251325/101‑1 (MQ=255)
                                                                                       tcCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTg          >  1:11847118/1‑101 (MQ=255)
                                                                                          tGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCa       <  1:2155859/101‑1 (MQ=255)
                                                                                          tGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCa       <  1:9669916/101‑1 (MQ=255)
                                                                                           gAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCaa      >  1:5084901/1‑101 (MQ=255)
                                                                                           gAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCaa      <  1:8967731/101‑1 (MQ=255)
                                                                                           gAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCaa      <  1:1961385/101‑1 (MQ=255)
                                                                                             aaCCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCaaaa    <  1:9525395/101‑1 (MQ=255)
                                                                                             aaCCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCaaaa    <  1:2117341/101‑1 (MQ=255)
                                                                                             aaCCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCaaaa    >  1:6220246/1‑101 (MQ=255)
                                                                                              aCCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCAAAAc   >  1:3673943/1‑101 (MQ=255)
                                                                                              aCCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCAAAAc   >  1:2576199/1‑101 (MQ=255)
                                                                                               ccAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCAAAACt  >  1:3908844/1‑101 (MQ=255)
                                                                                               ccAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCAAAACt  >  1:3283160/1‑101 (MQ=255)
                                                                                                  |                                                                                                 
CGGTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCACTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCAAAACT  >  NC_007779/3898559‑3898754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.