| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | 1980091 = | 0 (0.000) | 169 (0.710) | 89/180 | NT | 100% | intergenic (‑171/+264) | flhD/insH | DNA‑binding transcriptional dual regulator/IS5 element protein |
| ? | NC_007779 | 1980209 = | NA (NA) | intergenic (‑289/+146) | flhD/insH | DNA‑binding transcriptional dual regulator/IS5 element protein | |||||
Only 100 of 442 total aligned reads displayed.
AAATAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAA > NC_007779/1979991‑1980191 | aaaTAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATc > 1:5136383/1‑101 (MQ=255) taatTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTaa > 1:10147382/1‑101 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAg > 1:1965713‑M1/97‑101 (MQ=255) aaTTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAG > 1:5212674‑M1/1‑101 (MQ=255) caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGAt > 1:3925026‑M1/95‑101 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGAttt > 1:7249962‑M1/93‑101 (MQ=255) aGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaag > 1:4835187‑M1/1‑97 (MQ=255) gCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaagg > 1:266052‑M1/1‑96 (MQ=255) tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCt > 1:7655208‑M1/88‑101 (MQ=255) ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTa > 1:64102‑M1/87‑101 (MQ=255) aTAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAAAATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaaca > 1:585672‑M1/1‑88 (MQ=255) tAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaa < 1:1521375‑M1/101‑15 (MQ=255) tAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaa < 1:8568553‑M1/101‑15 (MQ=255) gTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagt < 1:2550655‑M1/101‑17 (MQ=255) agaaaaaatcggctcaaacatgaagaaatgtaaggactgagtcagccgagaagaatttccccgcttatccgcaccttccCTAAGATTTTTCCTAAATCGAc > 1:1178827‑M1/80‑101 (MQ=255) aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCaa > 1:6738679‑M1/76‑101 (MQ=255) aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCaa > 1:11099138‑M1/76‑101 (MQ=255) aTAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctga > 1:4541613‑M1/1‑79 (MQ=255) cTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatga < 1:7173562‑M1/101‑28 (MQ=255) tGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgag < 1:9894593‑M1/101‑29 (MQ=255) gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACt > 1:5088004‑M1/69‑101 (MQ=255) gCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgaga > 1:9605342‑M1/1‑72 (MQ=255) aaTAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatc < 1:6242224‑M1/101‑32 (MQ=255) aaTAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatc > 1:9193694‑M1/1‑70 (MQ=255) tAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcat < 1:2842975‑M1/101‑34 (MQ=255) aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCa > 1:11297922‑M1/64‑101 (MQ=255) acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCAc > 1:5954115‑M1/63‑101 (MQ=255) cAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgttt < 1:2613982‑M1/101‑38 (MQ=255) aGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttg < 1:1407549‑M1/101‑39 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTCCTCGTCACTacac > 1:11901363‑M1/58‑101 (MQ=255) aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTacac > 1:4041160‑M1/58‑101 (MQ=255) agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACg > 1:10047660‑M1/57‑101 (MQ=255) aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGcac > 1:8330674‑M1/54‑101 (MQ=255) aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGcac > 1:3176029‑M1/54‑101 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGcaca > 1:9042835‑M1/53‑101 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATa > 1:5298199‑M1/51‑101 (MQ=255) tttttGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggcgcgaacaagtccctgatatgagatcatgtttgtcatctgga > 1:9808558‑M1/1‑54 (MQ=255) ttttGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag < 1:4016215‑M1/101‑49 (MQ=255) aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACa > 1:5586003‑M1/49‑101 (MQ=255) tgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAAc > 1:10613865‑M1/47‑101 (MQ=255) tgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAAc > 1:11496004‑M1/47‑101 (MQ=255) gactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACg > 1:11726865‑M1/46‑101 (MQ=255) tttAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag > 1:2284824‑M1/1‑47 (MQ=255) tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACCCGTCACTACACGCACATACAACGGAg > 1:7322681‑M1/43‑101 (MQ=255) ttAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga < 1:10289055‑M1/101‑56 (MQ=255) aaTATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac > 1:8789046‑M1/1‑44 (MQ=255) aaTATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac > 1:9503036‑M1/1‑44 (MQ=255) tcagccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAggggg < 1:3494677‑M1/63‑1 (MQ=255) atatGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca < 1:7976791‑M1/101‑59 (MQ=255) atGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg > 1:10847664‑M1/1‑41 (MQ=255) ccgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTg < 1:994744‑M1/67‑1 (MQ=255) cgagaagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGc < 1:1556891‑M1/68‑1 (MQ=255) ccTTACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc < 1:9090689‑M1/101‑65 (MQ=255) ttACAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat > 1:1928337‑M1/1‑35 (MQ=255) tACAAATAGGAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc < 1:1328443‑M1/101‑68 (MQ=255) aagaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGAtt < 1:10750138‑M1/72‑1 (MQ=255) agaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGAttt > 1:2212128‑M1/29‑101 (MQ=255) aCAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgattgtcatctggagccatagaacagggttcatca < 1:1800694‑M1/101‑69 (MQ=255) gaatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGAtttt > 1:6873285‑M1/28‑101 (MQ=255) cAAATAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat < 1:3895025‑M1/101‑70 (MQ=255) aatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTc > 1:9566182‑M1/27‑101 (MQ=255) aatttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTc > 1:10501684‑M1/27‑101 (MQ=255) aTAGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgag < 1:4280522‑M1/101‑73 (MQ=255) ttccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCaat > 1:4804085‑M1/24‑101 (MQ=255) aGAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc > 1:3356025‑M1/1‑27 (MQ=255) gAAATGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca > 1:3543048‑M1/1‑26 (MQ=255) ccccgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCaataa > 1:5989‑M1/22‑101 (MQ=255) aaaTGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat < 1:9289154‑M1/101‑77 (MQ=255) aaTGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc < 1:5673424‑M1/101‑78 (MQ=255) aaTGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc > 1:4584343‑M1/1‑24 (MQ=255) cgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGc > 1:10961964‑M1/19‑101 (MQ=255) cgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGc < 1:5779232‑M1/83‑1 (MQ=255) cgcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGc > 1:2421483‑M1/19‑101 (MQ=255) aTGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatca > 1:4710666‑M1/1‑23 (MQ=255) tGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa > 1:7544494‑M1/1‑22 (MQ=255) tGGGTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa > 1:207905‑M1/1‑22 (MQ=255) gcttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCg > 1:29322‑M1/18‑101 (MQ=255) cttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGt < 1:2728025‑M1/85‑1 (MQ=255) cttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGt < 1:8117046‑M1/85‑1 (MQ=255) ttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTg < 1:9696303‑M1/86‑1 (MQ=255) ttattcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTg < 1:544946‑M1/86‑1 (MQ=255) ggTCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact < 1:2355764‑M1/101‑82 (MQ=255) tCTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta < 1:11965615‑M1/101‑84 (MQ=255) ttcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATg > 1:4952912‑M1/13‑101 (MQ=255) cTTTACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac < 1:8450377‑M1/101‑85 (MQ=255) tttACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacc > 1:415773‑M1/1‑16 (MQ=255) tcgcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGc > 1:1653184‑M1/12‑101 (MQ=255) ttACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct > 1:8861057‑M1/1‑15 (MQ=255) tACACTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt > 1:3628283‑M1/1‑14 (MQ=255) gcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAg > 1:1731988‑M1/10‑101 (MQ=255) gcaccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAg < 1:3734941‑M1/92‑1 (MQ=255) cacTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg > 1:7802449‑M1/1‑12 (MQ=255) ccttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATc > 1:10028491‑M1/7‑101 (MQ=255) cttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCCCTACACGCCCATACAACGGAGGGGGGCTGCGATTTTCAATACTGCGTGATGCAGATca < 1:7040404‑M1/96‑1 (MQ=255) cttccCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATca < 1:11418278‑M1/96‑1 (MQ=255) cTTATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc < 1:616328‑M1/101‑92 (MQ=255) ttATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg < 1:8403121‑M1/101‑93 (MQ=255) ttATCTAAGgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccg > 1:8033202‑M1/1‑9 (MQ=255) cTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACaa < 1:3094896/101‑1 (MQ=255) cTAAGATTTTTCCTAAATCGACGCAACTGTACTCGCCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACaa > 1:65519/1‑101 (MQ=255) | AAATAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAA > NC_007779/1979991‑1980191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |