BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 1672780	0 (0.000)	198 (0.830)	112/180	NT	100%	intergenic (+114/‑310)	ynfM/asr	transporter/acid shock‑inducible periplasmic protein
*	?	NC_007779	1980209 =	NA (NA)	198 (0.830)	112/180	NT	100%	intergenic (‑289/+146)	flhD/insH	DNA‑binding transcriptional dual regulator/IS5 element protein

Only 100 of 207 total aligned reads displayed.

CGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGA  >  NC_007779/1980109‑1980303

cGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaa‑g                                                                                                >  1:1468060/1‑101 (MQ=255)

 gACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaa‑gg                                                                                               <  1:5445912/101‑1 (MQ=255)

 gACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaa‑gg                                                                                               >  1:7124527/1‑101 (MQ=255)

  aCGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACCCTCAATTACTTaa‑gga                                                                                              <  1:626210/101‑1 (MQ=255)

  aCGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaa‑gga                                                                                              <  1:2110161/101‑1 (MQ=255)

   cGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaa‑ggaa                                                                                             <  1:1377155/101‑1 (MQ=255)

   cGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaa‑ggaa                                                                                             <  1:11489159/101‑1 (MQ=255)

     cAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaa‑ggaagg                                                                                           >  1:1024680/1‑101 (MQ=255)

      aaCTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGt                                                                                          <  1:9839405/101‑1 (MQ=255)

      aaCTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGt                                                                                          <  1:9291842/101‑1 (MQ=255)

       aCTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTg                                                                                         <  1:3699534/101‑1 (MQ=255)

          gTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACACAATTACCTAA‑GGAAGGTGCGa                                                                                      <  1:7748539/101‑1 (MQ=255)

            aCTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAAt                                                                                    >  1:9529932/1‑101 (MQ=255)

             cTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATa                                                                                   >  1:11038103/1‑101 (MQ=255)

               cGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAg                                                                                 <  1:11938980/101‑1 (MQ=255)

                 tCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCg                                                                               >  1:718255/1‑101 (MQ=255)

                 tCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCg                                                                               <  1:11076678/101‑1 (MQ=255)

                    cTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCgggg                                                                            >  1:5223645/1‑101 (MQ=255)

                     tccccccacaAAAAAGGGGGGGGGGCGGCGTTTTTAAATAATGCGTGATGCAGACCACAAAAAACCCTAAATT‑CTTAAGGGAGGGTGAAAATAAGCGGGGa                                                                           <  1:402891/95‑1 (MQ=255)

                     tACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGa                                                                           >  1:5082293/1‑101 (MQ=255)

                     tACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGa                                                                           >  1:11741059/1‑101 (MQ=255)

                     tACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGa                                                                           >  1:531937/1‑101 (MQ=255)

                      acacGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGaa                                                                          >  1:4939859/1‑101 (MQ=255)

                      acaaGCAAATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGaa                                                                          >  1:4597033/1‑101 (MQ=255)

                       cacGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGaaa                                                                         <  1:10468065/101‑1 (MQ=255)

                        acGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACAAAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAAt                                                                        <  1:5789887/101‑1 (MQ=255)

                         cGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAAtt                                                                       >  1:9603769/1‑101 (MQ=255)

                         cGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAAtt                                                                       >  1:1053868/1‑101 (MQ=255)

                         cGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAAtt                                                                       <  1:3063646/101‑1 (MQ=255)

                         cGCAAATAGAAGGGGGGGGGGCTGTTTTTTTAAATAAGGGGTGATGAAAACAAAAAAAAACACAAAATTATTAAA‑GGAGGGTGAAAATAAGCGGGGAAAtt                                                                       <  1:8329713/101‑1 (MQ=255)

                          gCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAAttc                                                                      >  1:8573345/1‑101 (MQ=255)

                            acaTACAGGGGGGGGGGGCTGCGTTTTTAAATAATGGGTGATGCAGATCACAAAAACCCCTCAATTATTAAA‑GGAAGGTGAGAATAAGCGGGGAAAttctt                                                                    <  1:9026041/101‑1 (MQ=21)

                              aTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGGTGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATtcttct                                                                  <  1:1846253/101‑1 (MQ=255)

                              aTACAACGGAGGGGGGCTGCGATTTTAAATAATGCGTGATGCAGATCACACAAAACACTAAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATtcttct                                                                  <  1:3196705/101‑1 (MQ=255)

                               tACAGCGGAGGGGGGCTGCGATTTTCAATAATCCGTGAGGCAGATCACACAAACCACTCAATTCCTTAA‑GGAGGGTGCGAATAAGCCGGGAAATTCTtctc                                                                 <  1:7095543/101‑1 (MQ=255)

                               tACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTtctc                                                                 >  1:3417119/1‑101 (MQ=255)

                                aCAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCg                                                                <  1:2694972/101‑1 (MQ=255)

                                aCAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCg                                                                <  1:1543865/101‑1 (MQ=255)

                                aCAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCg                                                                <  1:6726994/101‑1 (MQ=255)

                                aCAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCg                                                                <  1:1565938/101‑1 (MQ=255)

                                 cAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCgg                                                               <  1:8853307/101‑1 (MQ=255)

                                  aaCGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGc                                                              >  1:10820158/1‑101 (MQ=255)

                                   aCGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCt                                                             <  1:11721467/101‑1 (MQ=255)

                                    cGGGGGGGGGCTGCATTTTTAAATAATGCGTGATGCAGACCACACAAAACCCTAAATTACTAAA‑GGAGGGTGGGAATAAGCGGGGAAATTCTTCTCGGCTg                                                            <  1:9053831/101‑1 (MQ=25)

                                    cGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTg                                                            >  1:3885465/1‑101 (MQ=255)

                                    cGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTg                                                            >  1:8685869/1‑101 (MQ=255)

                                    cGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTg                                                            <  1:7938621/101‑1 (MQ=255)

                                     ggAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTgc                                                           >  1:6638965/1‑100 (MQ=255)

                                     ggAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGa                                                           >  1:4791134/1‑101 (MQ=255)

                                       gggggggTTGCGATTTTAAATAAGCGGTGAGGCAAATCACAAAAACCACTCAATTCCTAAA‑GGAAGGTGCAAAAACGCGGGGAAATTCTTCTCGGCTGACt                                                         <  1:431830/100‑1 (MQ=16)

                                       aGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACt                                                         >  1:8991908/1‑101 (MQ=255)

                                       aGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACt                                                         <  1:1979602/101‑1 (MQ=255)

                                          gtggCGGCGATTTTAAATAATGCGTGAGGGAGATCACACAAACCAAAAAATTGCTAAA‑GGAAGGTGAAAATAAGAGGGGAAATTCTTCTCGGCTGACTCAg                                                      <  1:538923/99‑1 (MQ=16)

                                          ggggCGGCGAGTTTCAATAATGCGTGATGGAGATCGAACACACCACTAAATGGCTTAA‑GGGAGGTAAGAATAAGCGGGAAAATTTTAATCGGCTGACTCAg                                                      <  1:1952810/101‑1 (MQ=255)

                                           gggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGt                                                     >  1:11848339/1‑101 (MQ=255)

                                            ggCTGCGCTTTTCAATAACGCGTGGTGCAGACCATCCAAACTAAAAAATGGGTAAA‑GGAAGGTGCAAAGAAGCGGGAAAATTCTTCTCGGCTGATTCAGtc                                                    <  1:11273437/101‑1 (MQ=9)

                                            ggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtc                                                    >  1:5815563/1‑101 (MQ=255)

                                            ggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtc                                                    >  1:4492413/1‑101 (MQ=255)

                                            ggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtc                                                    >  1:7587848/1‑101 (MQ=255)

                                             gCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtca                                                   >  1:11152963/1‑101 (MQ=255)

                                               tGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatt                                                 >  1:7249503/1‑101 (MQ=255)

                                               tGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatt                                                 >  1:10017546/1‑101 (MQ=255)

                                               tGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatt                                                 >  1:1019777/1‑101 (MQ=255)

                                                   aTTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcat                                             >  1:9924245/1‑101 (MQ=255)

                                                     tttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTcatttcattt                                           >  1:347056/1‑101 (MQ=255)

                                                          ataatGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCa                                      >  1:11383140/1‑101 (MQ=255)

                                                           taatGCGTGATGCAGATCACACAAAACACTCCATTACTTAA‑GGAAGGAGCGAATAAGCGGGGGAAATCTTTTCGGCTGGCTCAACCCTTTCATttttttct                                     >  1:6688985/1‑98 (MQ=255)

                                                           taatGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAt                                     >  1:11649469/1‑101 (MQ=255)

                                                            aatGCGTGATGCAGATCACACAAAACCCTCAACTACTTAA‑GGAAGGAGCCAACAAGCGGGGAAATTCTTCTCGGCTCACCCAGTCATTTCATTTCTTCAtc                                    >  1:6428752/1‑100 (MQ=18)

                                                              tGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGtt                                  >  1:6176355/1‑101 (MQ=255)

                                                              tGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGtt                                  >  1:4237059/1‑101 (MQ=255)

                                                                  tGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAg                              >  1:2984641/1‑101 (MQ=255)

                                                                    aTGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGcc                            >  1:4670713/1‑101 (MQ=255)

                                                                     tGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCg                           >  1:9187336/1‑101 (MQ=255)

                                                                      gCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGa                          >  1:8454275/1‑101 (MQ=255)

                                                                       cAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAt                         >  1:856080/1‑101 (MQ=255)

                                                                       cAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAt                         >  1:1440422/1‑101 (MQ=255)

                                                                         gATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttt                       >  1:1928883/1‑101 (MQ=255)

                                                                           tCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttttt                     >  1:8759095/1‑101 (MQ=255)

                                                                           tCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttttt                     >  1:7363926/1‑101 (MQ=255)

                                                                            cacacaAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAtttttt                    >  1:573097/1‑101 (MQ=255)

                                                                            cacacaAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAtttttt                    >  1:2435360/1‑101 (MQ=255)

                                                                             acacaAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtc                   >  1:8467190/1‑101 (MQ=255)

                                                                             acacaAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtc                   >  1:7007350/1‑101 (MQ=255)

                                                                              cacaAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtct                  >  1:4832903/1‑101 (MQ=255)

                                                                               acaAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtctc                 >  1:9408166/1‑101 (MQ=255)

                                                                                caAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTcc                >  1:12009156/1‑101 (MQ=255)

                                                                                 aaaaCACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTccc               >  1:11825105/1‑101 (MQ=255)

                                                                                  aaaCACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCg              >  1:931831/1‑101 (MQ=255)

                                                                                  aaaCACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCg              >  1:10838932/1‑101 (MQ=255)

                                                                                     cacTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCTGTaa           >  1:1736238/1‑101 (MQ=255)

                                                                                        tCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATg        >  1:10327420/1‑101 (MQ=38)

                                                                                        tCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATg        >  1:3635684/1‑101 (MQ=38)

                                                                                         cAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGc       >  1:10945863/1‑101 (MQ=37)

                                                                                          aaTTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGcc      >  1:6502681/1‑101 (MQ=35)

                                                                                          aaTTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGcc      >  1:5925331/1‑101 (MQ=35)

                                                                                          aaTTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGcc      >  1:4444540/1‑101 (MQ=35)

                                                                                             tACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTg   >  1:4155516/1‑101 (MQ=32)

                                                                                              aCTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGa  >  1:1209836/1‑101 (MQ=31)

                                                                                              aCTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGa  >  1:5658556/1‑101 (MQ=31)

CGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAA‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGA  >  NC_007779/1980109‑1980303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.