New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 35127597 (0.020)451 (1.050) 152/178 NT 98.5% coding (535/1026 nt) cytR DNA‑binding transcriptional dual regulator
?NC_007779 = 3744262 NA (NA)intergenic (‑90/+31) insC/yidZ IS2 element protein/DNA‑binding transcriptional regulator

Only 100 of 1040 total aligned reads displayed.

TCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCG  >  NC_007779/3512659‑3512859
                                                                                                    |                                                                                                    
 cTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTa                                                                                                     <  1:9718254‑M1/101‑2 (MQ=255)
 cTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTa                                                                                                     <  1:11819635‑M1/101‑2 (MQ=255)
 cTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGAAAATTATTa                                                                                                     >  1:9107533‑M1/1‑100 (MQ=255)
   gccgccGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTaga                                                                                                   <  1:20350902‑M1/101‑4 (MQ=255)
      gccgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactg                                                                                                >  1:15898020‑M1/1‑95 (MQ=255)
      gccgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactg                                                                                                >  1:13896308‑M1/1‑95 (MQ=255)
           tcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCaa                                                                                           <  1:625361‑M2/18‑1 (MQ=255)
           tGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggcccc                                                                                           <  1:8337310‑M1/101‑12 (MQ=255)
            cgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAg                                                                                          <  1:267031‑M2/19‑1 (MQ=255)
            cgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAg                                                                                          >  1:12278073‑M2/83‑101 (MQ=255)
            cgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAg                                                                                          <  1:6592344‑M2/19‑1 (MQ=255)
             gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAgg                                                                                         >  1:18916090‑M2/82‑101 (MQ=255)
               tcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGc                                                                                       >  1:2760526‑M2/80‑101 (MQ=255)
               tcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGc                                                                                       <  1:11042628‑M2/22‑1 (MQ=255)
               gATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctga                                                                                       <  1:19346013‑M1/101‑16 (MQ=255)
                   cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATaa                                                                                   >  1:7595749‑M2/76‑101 (MQ=255)
                    cgaacgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctc                                                                                  <  1:12594607‑M1/101‑21 (MQ=255)
                     gaacgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctcc                                                                                 >  1:16744535‑M1/1‑80 (MQ=255)
                     cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAAc                                                                                 <  1:19880288‑M2/28‑1 (MQ=255)
                       acgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccag                                                                               <  1:13034856‑M1/101‑24 (MQ=255)
                       acgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccag                                                                               <  1:13160494‑M1/101‑24 (MQ=255)
                        gaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGa                                                                              <  1:1527178‑M2/31‑1 (MQ=255)
                        cgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccaga                                                                              >  1:17618858‑M1/1‑77 (MQ=255)
                           tatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTg                                                                           >  1:19152638‑M2/68‑101 (MQ=255)
                              tGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaacca                                                                        >  1:21368722‑M1/1‑71 (MQ=255)
                               tgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTg                                                                       <  1:428533‑M2/38‑1 (MQ=255)
                               gCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaa                                                                       <  1:5488670‑M1/101‑32 (MQ=255)
                                cACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatccccagacaaccaat                                                                      <  1:18449821‑M1/101‑33 (MQ=255)
                                  ggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGtat                                                                    >  1:19785267‑M2/61‑101 (MQ=255)
                                    cagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAg                                                                  <  1:19063647‑M2/43‑1 (MQ=255)
                                     gagctggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcac                                                                 <  1:15997361‑M1/101‑38 (MQ=255)
                                     agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggcgcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGc                                                                 >  1:18561085‑M2/58‑101 (MQ=255)
                                       gctggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcactt                                                               <  1:2970051‑M1/101‑40 (MQ=255)
                                       cgtgcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCg                                                               <  1:18006488‑M2/46‑1 (MQ=255)
                                          ggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaa                                                            <  1:18336117‑M1/101‑43 (MQ=255)
                                          gcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTc                                                            <  1:3668352‑M2/49‑1 (MQ=255)
                                            agctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaata                                                          <  1:20731722‑M1/101‑45 (MQ=255)
                                             tgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCg                                                         >  1:4980855‑M2/50‑101 (MQ=255)
                                             gctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataa                                                         <  1:21753313‑M1/101‑46 (MQ=255)
                                              gtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGa                                                        >  1:2294443‑M2/49‑101 (MQ=255)
                                              ctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataag                                                        <  1:15659018‑M1/101‑47 (MQ=255)
                                              ctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataag                                                        <  1:11483129‑M1/101‑47 (MQ=255)
                                               taatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGaa                                                       >  1:4841656‑M2/48‑101 (MQ=255)
                                               taatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGaa                                                       <  1:13610107‑M2/54‑1 (MQ=255)
                                                aatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAag                                                      >  1:14665657‑M2/47‑101 (MQ=255)
                                                aatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCACAAACGGATTGGCTGTATAGCCGGTCCCGAag                                                      >  1:8875823‑M2/47‑101 (MQ=255)
                                                 ccTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtga                                                     >  1:16528591‑M1/1‑52 (MQ=255)
                                                   gggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAgaga                                                   <  1:12353779‑M2/58‑1 (MQ=255)
                                                    aCAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatag                                                  <  1:18199333‑M1/101‑53 (MQ=255)
                                                     cAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt                                                 <  1:8561639‑M1/101‑54 (MQ=255)
                                                       gTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct                                               <  1:17862394‑M1/101‑56 (MQ=255)
                                                          cATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaa                                            <  1:14406894‑M1/101‑59 (MQ=255)
                                                           tgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCGTAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCtg                                           <  1:12849781‑M2/66‑1 (MQ=255)
                                                            tatCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaata                                          <  1:5989126‑M1/101‑61 (MQ=255)
                                                            gataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCtgt                                          <  1:10728741‑M2/67‑1 (MQ=255)
                                                             atCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatac                                         <  1:58013‑M1/101‑62 (MQ=255)
                                                               cGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatacta                                       <  1:10003659‑M1/101‑64 (MQ=255)
                                                                gACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccgtgaatctccagacaaccaatatctcttaaataagtgatagtcttaatactag                                      <  1:21593157‑M1/101‑65 (MQ=255)
                                                                gACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactag                                      >  1:20169118‑M1/1‑37 (MQ=255)
                                                                  agatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACt                                    <  1:1042446‑M2/73‑1 (MQ=255)
                                                                  agatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACt                                    >  1:17128704‑M2/29‑101 (MQ=255)
                                                                    atgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTAc                                  <  1:4041685‑M2/75‑1 (MQ=255)
                                                                     tCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt                                 >  1:4477902‑M1/1‑32 (MQ=255)
                                                                      gtctggaaatataggtgcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCg                                >  1:6388031‑M2/25‑101 (MQ=255)
                                                                       tGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag                               <  1:4672916‑M1/101‑72 (MQ=255)
                                                                       tGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag                               <  1:20883425‑M1/101‑72 (MQ=255)
                                                                         tggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCt                             <  1:12464526‑M2/80‑1 (MQ=255)
                                                                         aCCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac                             >  1:3216240‑M1/1‑28 (MQ=255)
                                                                          ccgccgCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagact                            <  1:13483617‑M1/101‑75 (MQ=255)
                                                                           gaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGCGATGCCGCTGTGTCACTACCGCCTGc                           >  1:3430433‑M2/20‑101 (MQ=255)
                                                                            gccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactag                          <  1:6745186‑M1/101‑77 (MQ=255)
                                                                            gccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactag                          >  1:5252369‑M1/1‑25 (MQ=255)
                                                                            aaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCa                          >  1:14869345‑M2/19‑101 (MQ=255)
                                                                               gcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtca                       >  1:10209477‑M1/1‑22 (MQ=255)
                                                                               gcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtca                       >  1:1091021‑M1/1‑22 (MQ=255)
                                                                                cATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcat                      <  1:9519470‑M1/101‑81 (MQ=255)
                                                                                cATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcat                      >  1:21154225‑M1/1‑21 (MQ=255)
                                                                                  tttGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg                    <  1:17329515‑M1/101‑83 (MQ=255)
                                                                                   ttGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgg                   <  1:19602957‑M1/101‑84 (MQ=255)
                                                                                   ttGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgg                   >  1:5640227‑M1/1‑18 (MQ=255)
                                                                                   ttGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgg                   >  1:2509339‑M1/1‑18 (MQ=255)
                                                                                     gATGCAGTAAATTATTagactggccccctgaatctccagacaaccagtatcacttaaataagtgatagtcttaatactagtttttagactagtcattggag                 <  1:18705011‑M1/101‑86 (MQ=255)
                                                                                      gcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGtt                <  1:3805722‑M2/93‑1 (MQ=255)
                                                                                         aatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAg             <  1:16183992‑M2/96‑1 (MQ=255)
                                                                                           tccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgc           >  1:8082287‑M2/4‑101 (MQ=255)
                                                                                           tccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgc           <  1:21009754‑M2/98‑1 (MQ=255)
                                                                                           tccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGACGGTCCCGAAGAGATGCCGCTGGGTCACTACCGCCTGCAAGGCTATGTTCAGgc           >  1:21960494‑M2/4‑101 (MQ=255)
                                                                                              AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCt        >  1:8709037‑M2/1‑101 (MQ=255)
                                                                                                ttatttatATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGc      >  1:784340/1‑101 (MQ=255)
                                                                                                tgaataggctggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgatt      <  1:14159039‑M1/97‑97 (MQ=255)
                                                                                                   tttatATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTc   >  1:9286726/1‑101 (MQ=255)
                                                                                                   atagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat   <  1:1691139‑M1/100‑100 (MQ=255)
                                                                                                    ttatATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCg  >  1:11982448/1‑101 (MQ=255)
                                                                                                    tagactggccctctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg  >  1:15433208‑M1/1‑1 (MQ=255)
                                                                                                    tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg  >  1:16319794‑M1/1‑1 (MQ=255)
                                                                                                    tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg  <  1:11292401‑M1/101‑101 (MQ=255)
                                                                                                    tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg  <  1:7400286‑M1/101‑101 (MQ=255)
                                                                                                    tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg  >  1:7033978‑M1/1‑1 (MQ=255)
                                                                                                    tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg  <  1:12714672‑M1/101‑101 (MQ=255)
                                                                                                    tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg  >  1:15089861‑M1/1‑1 (MQ=255)
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TCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCG  >  NC_007779/3512659‑3512859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.