New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_007779 | 4310363 = | NA (NA) | 471 (1.080) | 155/180 | NT | 100% | intergenic (‑287/‑68) | yjcS/insH | alkyl sulfatase/IS5 element protein |
? | NC_007779 | 4353540 = | 0 (0.000) | intergenic (‑118/+453) | dcuB/dcuR | C4‑dicarboxylate antiporter/DNA‑binding response regulator in two‑component regulatory system with DcuS |
ATGGGGCTTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTC > NC_007779/4310351‑4310451 | tcattcatttAGGGAAGGTGCGAACAACTCCCTCATTTGCCATCATGTTTGTCATCTTGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTc < 1:7983205/94‑1 (MQ=11) | ATGGGGCTTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTC > NC_007779/4310351‑4310451 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |