BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	882757 =	335 (1.070)	8 (0.030)	7/180	NT	2.3%	coding (400/759 nt)	deoR	DNA‑binding transcriptional repressor
*	?	NC_007779	1105622 =	NA (NA)	8 (0.030)	7/180	NT	2.3%	intergenic (+88/+11)	csgC/insD	curli production protein/IS2 element protein

Only 100 of 325 total aligned reads displayed.

AGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACT  >  NC_007779/1105522‑1105719

aGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCtt                                                                                                   >  1:7138572/1‑101 (MQ=255)

  aaaaGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTgg                                                                                                 >  1:6990709/1‑101 (MQ=255)

    aaGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGAt                                                                                               <  1:5963857/101‑1 (MQ=255)

     aGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGAtt                                                                                              >  1:129813/1‑101 (MQ=255)

      gTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGAttt                                                                                             >  1:5042217/1‑101 (MQ=255)

       tCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTg                                                                                            >  1:7329857/1‑101 (MQ=255)

       tCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTg                                                                                            >  1:3342999/1‑101 (MQ=255)

        cTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGc                                                                                           >  1:10257590/1‑101 (MQ=255)

        cTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGc                                                                                           >  1:9820551/1‑101 (MQ=255)

            aTTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCt                                                                                       >  1:7827370/1‑101 (MQ=255)

            aTTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCt                                                                                       <  1:5784947/101‑1 (MQ=255)

            aTTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCt                                                                                       >  1:5450864/1‑101 (MQ=255)

             tttGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCta                                                                                      >  1:3655268/1‑101 (MQ=255)

             tttGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCta                                                                                      <  1:9113389/101‑1 (MQ=255)

             tttGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCta                                                                                      <  1:13193265/101‑1 (MQ=255)

              ttgttgAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCtat                                                                                     >  1:2299804/1‑101 (MQ=255)

               tgttgAAATATCGAGCATAAGATGAATCTGGGGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCttta                                                                                    >  1:11583486/1‑101 (MQ=255)

               tgttgAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCtata                                                                                    <  1:11341518/101‑1 (MQ=255)

                gttgAAATATCGAGCATAAGATGAACCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTatat                                                                                   <  1:13515861/101‑1 (MQ=255)

                   gAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTc                                                                                >  1:4150843/1‑101 (MQ=255)

                    aaaTATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTcc                                                                               >  1:2865298/1‑101 (MQ=255)

                     aaTATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATTGATAACACAACCCTTGGATTTGCCCCTATATTTCCa                                                                              <  1:8405248/101‑1 (MQ=255)

                     aaTATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCa                                                                              >  1:5329521/1‑101 (MQ=255)

                     aaTATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCa                                                                              <  1:11247260/101‑1 (MQ=255)

                       tatCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGa                                                                            <  1:4921755/101‑1 (MQ=255)

                        atCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGAc                                                                           <  1:9883583/101‑1 (MQ=255)

                        atCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGAc                                                                           <  1:12823303/101‑1 (MQ=255)

                          cGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACAt                                                                         <  1:4268173/101‑1 (MQ=255)

                           gAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATc                                                                        <  1:6463370/101‑1 (MQ=255)

                           gAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATc                                                                        >  1:8603423/1‑101 (MQ=255)

                           gAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATc                                                                        >  1:239258/1‑101 (MQ=255)

                           gAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATc                                                                        >  1:11779442/1‑101 (MQ=255)

                            aGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCt                                                                       >  1:12466724/1‑101 (MQ=255)

                             gCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTg                                                                      <  1:11117902/101‑1 (MQ=255)

                             gCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTg                                                                      >  1:12203200/1‑101 (MQ=255)

                             gCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATAATTCCAGACATCTg                                                                      <  1:10725058/101‑1 (MQ=255)

                              cATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGt                                                                     <  1:2787879/101‑1 (MQ=255)

                                tAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTa                                                                   >  1:11934697/1‑101 (MQ=255)

                                 aaGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTAt                                                                  >  1:15268284/1‑101 (MQ=255)

                                 aaGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTAt                                                                  <  1:2549638/101‑1 (MQ=255)

                                 aaGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTAt                                                                  >  1:3009560/1‑101 (MQ=255)

                                     tGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACt                                                              >  1:11913005/1‑101 (MQ=255)

                                       aaTCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTa                                                            >  1:7899322/1‑101 (MQ=255)

                                        aTCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTaa                                                           >  1:15510079/1‑101 (MQ=255)

                                         tCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAAc                                                          <  1:2349750/101‑1 (MQ=255)

                                          cTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAAcc                                                         >  1:8040281/1‑101 (MQ=255)

                                           tGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAAccc                                                        >  1:5359540/1‑101 (MQ=255)

                                               gagaATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTa                                                    <  1:12744173/101‑1 (MQ=255)

                                               gagaATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTa                                                    <  1:10487776/101‑1 (MQ=255)

                                                agaATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTAc                                                   >  1:9265291/1‑101 (MQ=255)

                                                agaATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTAc                                                   <  1:9307635/101‑1 (MQ=255)

                                                 gaATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACa                                                  <  1:10179821/101‑1 (MQ=255)

                                                   aTGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAg                                                >  1:14456572/1‑101 (MQ=255)

                                                   aTGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAg                                                >  1:2009056/1‑101 (MQ=255)

                                                   aTGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAg                                                >  1:6016863/1‑101 (MQ=255)

                                                   aTGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAg                                                <  1:8521023/101‑1 (MQ=255)

                                                    tGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGc                                               <  1:1587875/101‑1 (MQ=255)

                                                    tGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGc                                               <  1:5701718/101‑1 (MQ=255)

                                                     ggTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGcc                                              >  1:4443073/1‑101 (MQ=255)

                                                      gTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGccc                                             <  1:1004521/101‑1 (MQ=255)

                                                       tCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCg                                            <  1:5856143/101‑1 (MQ=255)

                                                        ctgctgCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGc                                           >  1:5621500/1‑101 (MQ=255)

                                                        ctgctgCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGc                                           >  1:3986384/1‑101 (MQ=255)

                                                        ctgctgCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGc                                           <  1:1899329/101‑1 (MQ=255)

                                                         tgctgcGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCt                                          >  1:8305229/1‑101 (MQ=255)

                                                          gctgcGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTg                                         >  1:3108370/1‑101 (MQ=255)

                                                            tgcGAATCAGCCAACGTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGcc                                       >  1:4658752/1‑101 (MQ=255)

                                                            tgcGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGcc                                       <  1:160539/101‑1 (MQ=255)

                                                            tgcGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGcc                                       >  1:8125078/1‑101 (MQ=255)

                                                            tgcGAATCAGCCAACCTGAAAGTATGAATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGcc                                       <  1:12574102/101‑1 (MQ=255)

                                                             gcGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCg                                      >  1:6694554/1‑101 (MQ=255)

                                                              cGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGc                                     >  1:15607378/1‑101 (MQ=255)

                                                                  tCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGat                                 <  1:13320626/101‑1 (MQ=255)

                                                                   cAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGata                                >  1:12930311/1‑101 (MQ=255)

                                                                   cAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGata                                >  1:9724705/1‑101 (MQ=255)

                                                                     gCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATAtt                              >  1:12668806/1‑101 (MQ=255)

                                                                      ccAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTc                             <  1:10815240/101‑1 (MQ=255)

                                                                      ccAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTc                             >  1:735023/1‑101 (MQ=255)

                                                                      ccAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTc                             <  1:1418372/101‑1 (MQ=255)

                                                                        aaCCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTccc                           <  1:8849143/101‑1 (MQ=255)

                                                                        aaCCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTccc                           >  1:3582312/1‑101 (MQ=255)

                                                                           cTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTg                        >  1:3400589/1‑101 (MQ=255)

                                                                            tGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTgg                       >  1:7607193/1‑101 (MQ=255)

                                                                            tGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTgg                       >  1:9419279/1‑101 (MQ=255)

                                                                             gAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTATAAGCCCGCTGCCGCAGATATTCCCGTGgc                      >  1:8295436/1‑101 (MQ=255)

                                                                             gAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGgc                      >  1:7953931/1‑101 (MQ=255)

                                                                              aaaGTATGGATAACACAACCCNNGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGgcg                     >  1:13406598/1‑101 (MQ=255)

                                                                               aaGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGgcga                    <  1:13871274/101‑1 (MQ=255)

                                                                                   aTGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGgcgagcga                <  1:6312176/101‑1 (MQ=255)

                                                                                   aTGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGgcgagcga                >  1:6213340/1‑101 (MQ=255)

                                                                                      gATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATaa             >  1:15191483/1‑101 (MQ=255)

                                                                                        tAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAAcc           >  1:1469398/1‑101 (MQ=40)

                                                                                         aaCACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCTATAAccc          <  1:9669196/101‑1 (MQ=255)

                                                                                          acacAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCa         <  1:10001750/101‑1 (MQ=39)

                                                                                          acacAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCa         <  1:9446723/101‑1 (MQ=39)

                                                                                           cacaACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAg        >  1:13658536/1‑101 (MQ=38)

                                                                                             caACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAgcg      >  1:10851495/1‑101 (MQ=35)

                                                                                              aaCCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAgcgc     >  1:8884647/1‑101 (MQ=34)

                                                                                              aaCCATTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAgcgc     >  1:6797846/1‑101 (MQ=11)

                                                                                                cccTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCAc   >  1:6348920/1‑101 (MQ=32)

AGAAAAGTCTTAATTTGTTGAAATATCGAGCATAAGATGAATCTGGAGAGAATGGTCTGCTGCGAATCAGCCAACCTGAAAGTATGGATAACACAACCCTTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACT  >  NC_007779/1105522‑1105719

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.