New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 3186081NA (NA)349 (1.120) 151/178 NT 98.9% coding (26/2466 nt) yqiG outer membrane usher protein
?NC_007779 3512753 = 4 (0.010)coding (529/1026 nt) cytR DNA‑binding transcriptional dual regulator

Only 100 of 903 total aligned reads displayed.

GCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  >  NC_007779/3512653‑3512853
                                                                                                    |                                                                                                    
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      <  1:5648819‑M2/1‑1 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      <  1:6857860‑M2/1‑1 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:7665659‑M2/101‑101 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:7983776‑M2/101‑101 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      <  1:11888827‑M2/1‑1 (MQ=255)
  tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAat                                                                                                    >  1:13451835‑M2/99‑101 (MQ=255)
  tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAat                                                                                                    <  1:15653786‑M2/3‑1 (MQ=255)
   agtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAatt                                                                                                   >  1:2622723‑M2/98‑101 (MQ=255)
   agtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAatt                                                                                                   >  1:13741795‑M2/98‑101 (MQ=255)
      gcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatc                                                                                                >  1:1868708‑M2/95‑100 (MQ=255)
      gcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAattatt                                                                                                <  1:8490675‑M2/7‑1 (MQ=255)
        gctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAAttattta                                                                                              <  1:11442246‑M2/9‑1 (MQ=255)
          tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatcgctatcg                                                                                            >  1:13052629‑M2/91‑93 (MQ=255)
          tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTtata                                                                                            <  1:14041385‑M2/11‑1 (MQ=255)
          tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTtata                                                                                            <  1:8189241‑M2/11‑1 (MQ=255)
          tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTtata                                                                                            <  1:5226707‑M2/11‑1 (MQ=255)
            ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatcgctatcgct                                                                                          >  1:1170859‑M2/89‑91 (MQ=255)
            gccgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactg                                                                                          <  1:12468338‑M1/101‑7 (MQ=255)
              ttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAg                                                                                        <  1:11028174‑M2/15‑1 (MQ=255)
               tatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGc                                                                                       >  1:11977234‑M2/86‑101 (MQ=255)
               tatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGc                                                                                       <  1:11556163‑M2/16‑1 (MQ=255)
               gATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggcc                                                                                       >  1:15143265‑M1/1‑92 (MQ=255)
                atcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCa                                                                                      <  1:12539594‑M2/17‑1 (MQ=255)
                 tGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggcccc                                                                                     <  1:203865‑M1/101‑12 (MQ=255)
                  cgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAg                                                                                    >  1:11294908‑M2/83‑101 (MQ=255)
                   gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAgg                                                                                   >  1:8608996‑M2/82‑101 (MQ=255)
                   gTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccct                                                                                   <  1:12956058‑M1/101‑14 (MQ=255)
                    ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAggg                                                                                  >  1:13314939‑M2/81‑101 (MQ=255)
                     tcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGc                                                                                 >  1:6095587‑M2/80‑101 (MQ=255)
                          acgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATaaa                                                                            <  1:15411255‑M2/27‑1 (MQ=255)
                            gggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACg                                                                          <  1:4114313‑M2/29‑1 (MQ=255)
                              gaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGa                                                                        <  1:7098799‑M2/31‑1 (MQ=255)
                              cgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccaga                                                                        >  1:4860584‑M1/1‑77 (MQ=255)
                                aaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagaca                                                                      >  1:8701433‑M1/1‑75 (MQ=255)
                                  tttGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaac                                                                    >  1:4440428‑M1/1‑73 (MQ=255)
                                  atctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTgg                                                                    >  1:727054‑M2/67‑101 (MQ=255)
                                   ttGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaacc                                                                   <  1:10545374‑M1/101‑30 (MQ=255)
                                   ttGCACAGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaacc                                                                   >  1:10452738‑M1/1‑72 (MQ=255)
                                     tgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTg                                                                 >  1:10139563‑M2/64‑101 (MQ=255)
                                      gcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGt                                                                >  1:4346091‑M2/63‑101 (MQ=255)
                                          ggagctggagctTCCTACAGTTCATATCGACAATCTGACCGCTGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatca                                                            <  1:3743230‑M1/101‑37 (MQ=255)
                                          ggagctggagctGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatca                                                            >  1:4620004‑M1/1‑65 (MQ=255)
                                           agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGc                                                           <  1:9080183‑M2/44‑1 (MQ=255)
                                            gcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGcc                                                          >  1:3576435‑M2/57‑101 (MQ=255)
                                            gcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGcc                                                          >  1:4747840‑M2/57‑101 (MQ=255)
                                             gctggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcactt                                                         <  1:2921802‑M1/101‑40 (MQ=255)
                                             gctggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGAGGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcactt                                                         <  1:14650714‑M1/101‑40 (MQ=255)
                                              ctggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcactta                                                        >  1:14882815‑M1/1‑61 (MQ=255)
                                              ctggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcactta                                                        <  1:3118469‑M1/101‑41 (MQ=255)
                                               tggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaa                                                       >  1:15274690‑M1/1‑60 (MQ=255)
                                               tggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaa                                                       >  1:5007987‑M1/1‑60 (MQ=255)
                                                ggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaa                                                      <  1:15011984‑M1/101‑43 (MQ=255)
                                                ggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaa                                                      >  1:10749611‑M1/1‑59 (MQ=255)
                                                  agctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaata                                                    <  1:9892960‑M1/101‑45 (MQ=255)
                                                  agctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaata                                                    <  1:10938633‑M1/101‑45 (MQ=255)
                                                     taatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGaa                                                 >  1:15773097‑M2/48‑101 (MQ=255)
                                                     taatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGaa                                                 >  1:9657168‑M2/48‑101 (MQ=255)
                                                      gCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtg                                                >  1:5953202‑M1/1‑53 (MQ=255)
                                                       atgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAaga                                               <  1:6181152‑M2/56‑1 (MQ=255)
                                                         tACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgata                                             >  1:6721638‑M1/1‑50 (MQ=255)
                                                          ggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGAt                                            <  1:6303504‑M2/59‑1 (MQ=255)
                                                          aCAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatag                                            <  1:3471919‑M1/101‑53 (MQ=255)
                                                           gttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATg                                           <  1:530099‑M2/60‑1 (MQ=255)
                                                               tCATATCGACAATCTGACCGCCACATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctta                                       <  1:4244172‑M1/101‑58 (MQ=255)
                                                               agtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGc                                       <  1:14559458‑M2/64‑1 (MQ=255)
                                                                   ataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCtgtg                                   >  1:13141802‑M2/34‑101 (MQ=255)
                                                                   atCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatac                                   >  1:9772759‑M1/1‑40 (MQ=255)
                                                                    tCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatact                                  <  1:3894169‑M1/101‑63 (MQ=255)
                                                                       cagatgtctggaaatatagggtcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCAc                               <  1:216749‑M2/72‑1 (MQ=255)
                                                                       cagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCAc                               >  1:6475061‑M2/30‑101 (MQ=255)
                                                                        agatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACt                              <  1:13605743‑M2/73‑1 (MQ=255)
                                                                        agatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACt                              >  1:19270‑M2/29‑101 (MQ=255)
                                                                          aTCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt                            >  1:14380655‑M1/1‑33 (MQ=255)
                                                                          aTCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt                            >  1:5795754‑M1/1‑33 (MQ=255)
                                                                           tCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt                           >  1:15507953‑M1/1‑32 (MQ=255)
                                                                             tGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag                         <  1:9357385‑M1/101‑72 (MQ=255)
                                                                             tGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag                         >  1:785427‑M1/1‑30 (MQ=255)
                                                                             tGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag                         <  1:10008494‑M1/101‑72 (MQ=255)
                                                                              gACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga                        >  1:12303294‑M1/1‑29 (MQ=255)
                                                                              gACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga                        >  1:2427826‑M1/1‑29 (MQ=255)
                                                                               tggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCt                       >  1:1714827‑M2/22‑101 (MQ=255)
                                                                               aCCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagac                       >  1:9536512‑M1/1‑28 (MQ=255)
                                                                                 gaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGc                     >  1:1272385‑M2/20‑101 (MQ=255)
                                                                                   ccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt                   <  1:8283891‑M1/101‑78 (MQ=255)
                                                                                     gcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtca                 >  1:5425790‑M1/1‑22 (MQ=255)
                                                                                      cATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcat                >  1:3240534‑M1/1‑21 (MQ=255)
                                                                                        aggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCGCTACCGCCTGCAAGGCTa              >  1:10060065‑M2/13‑101 (MQ=255)
                                                                                        aggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTa              <  1:6609278‑M2/89‑1 (MQ=255)
                                                                                          tGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga            >  1:757452‑M1/1‑17 (MQ=255)
                                                                                             caaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTc         >  1:12889064‑M2/8‑101 (MQ=255)
                                                                                              aaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCa        >  1:2798416‑M2/7‑101 (MQ=255)
                                                                                              aaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCa        <  1:13230386‑M2/95‑1 (MQ=255)
                                                                                               aatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAg       >  1:8450666‑M2/6‑101 (MQ=255)
                                                                                                 tccAATTATTTTTATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgc     <  1:13913380‑M2/98‑1 (MQ=255)
                                                                                                 tccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgc     <  1:7433912‑M2/98‑1 (MQ=255)
                                                                                                 tccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgc     <  1:14153329‑M2/98‑1 (MQ=255)
                                                                                                 tccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgc     <  1:10291845‑M2/98‑1 (MQ=255)
                                                                                                  ccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGGGTCACTACCGCCTGCAAGGCTATGTTCAGgcg    >  1:2299387‑M2/3‑101 (MQ=255)
                                                                                                   cAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgcgc   <  1:8836682‑M2/100‑1 (MQ=255)
                                                                                                    AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCt  <  1:3329196‑M2/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
GCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  >  NC_007779/3512653‑3512853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.