BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	4355060 =	0 (0.000)	354 (1.220)	152/180	NT	100%	coding (1281/1632 nt)	dcuS	sensory histidine kinase in two‑component regulatory system with DcuR, regulator of anaerobic fumarate respiration
*	?	NC_007779	4502861 =	NA (NA)	354 (1.220)	152/180	NT	100%	intergenic (+241/‑46)	intB/insC	integrase/IS2 insertion element repressor InsA

Only 100 of 291 total aligned reads displayed.

TACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGAT  >  NC_007779/4502761‑4502960

 aCATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTa                                                                                                    >  1:10077689/1‑101 (MQ=255)

 aCATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTa                                                                                                    >  1:3555315/1‑101 (MQ=255)

    ttCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGAc                                                                                                 >  1:8077/1‑101 (MQ=255)

     tCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACt                                                                                                >  1:14513780/1‑101 (MQ=255)

      cAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTg                                                                                               >  1:10106006/1‑101 (MQ=255)

      cAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTg                                                                                               >  1:4627445/1‑101 (MQ=255)

         tAAAAAAGTAACCTCGTAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGcc                                                                                            >  1:10750260/1‑101 (MQ=255)

         tAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGcc                                                                                            >  1:13898400/1‑101 (MQ=255)

         tAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGcc                                                                                            >  1:5031640/1‑101 (MQ=255)

          aaaaaaGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGccc                                                                                           <  1:6254649/101‑1 (MQ=255)

           aaaaaGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGcccc                                                                                          >  1:12527686/1‑101 (MQ=255)

           aaaaaGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGcccc                                                                                          <  1:11353392/101‑1 (MQ=255)

            aaaaGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGccccc                                                                                         >  1:5523646/1‑101 (MQ=255)

            aaaaGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGccccc                                                                                         >  1:12448148/1‑101 (MQ=255)

             aaaGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCt                                                                                        <  1:5255912/101‑1 (MQ=255)

              aaGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTg                                                                                       >  1:3192381/1‑101 (MQ=255)

              aaGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTg                                                                                       >  1:6306895/1‑101 (MQ=255)

              aaGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTg                                                                                       >  1:6540440/1‑101 (MQ=255)

               aGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGa                                                                                      >  1:3993715/1‑101 (MQ=255)

                gTAACCTCATAAAAAATCCTGTACTCACAGGGTTATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGaa                                                                                     >  1:7161635/1‑101 (MQ=255)

                gTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGaa                                                                                     >  1:5872513/1‑101 (MQ=255)

                gTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGG‑TTTGGTGGTCCCCTTGAAGACTGCCCCCCtaat                                                                                     >  1:11175394/1‑98 (MQ=255)

                 tAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAAt                                                                                    >  1:7258438/1‑101 (MQ=255)

                 tAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAAt                                                                                    <  1:8781166/101‑1 (MQ=255)

                  aaCCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAAtc                                                                                   >  1:11573929/1‑101 (MQ=255)

                  aaCCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAAtc                                                                                   >  1:8114593/1‑101 (MQ=255)

                   aCCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAAtct                                                                                  >  1:9712891/1‑101 (MQ=255)

                     cTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTcc                                                                                >  1:12653152/1‑101 (MQ=255)

                     cTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTcc                                                                                <  1:930576/101‑1 (MQ=255)

                      tCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCa                                                                               >  1:1640488/1‑101 (MQ=255)

                      tCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCa                                                                               <  1:7874199/101‑1 (MQ=255)

                      tCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCa                                                                               >  1:856384/1‑101 (MQ=255)

                        aTAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTACTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGa                                                                             >  1:11432462/1‑101 (MQ=255)

                          aaaaaaTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACa                                                                           >  1:13456447/1‑101 (MQ=255)

                           aaaaaTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACaa                                                                          <  1:8242590/101‑1 (MQ=255)

                           aaaaaTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACaa                                                                          <  1:116881/101‑1 (MQ=255)

                             aaaTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAAcc                                                                        >  1:362715/1‑101 (MQ=255)

                              aaTCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCa                                                                       <  1:12839504/101‑1 (MQ=255)

                                tCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAat                                                                     >  1:7487368/1‑101 (MQ=255)

                                 ccTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAata                                                                    >  1:6051208/1‑101 (MQ=255)

                                 ccTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAata                                                                    >  1:1849351/1‑101 (MQ=255)

                                  cTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAatat                                                                   >  1:7660376/1‑101 (MQ=255)

                                   tGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATc                                                                  >  1:6949176/1‑101 (MQ=255)

                                   tGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATc                                                                  >  1:1130037/1‑101 (MQ=255)

                                    gTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCa                                                                 >  1:9435690/1‑101 (MQ=255)

                                    gTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCa                                                                 >  1:3343712/1‑101 (MQ=255)

                                     tACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCAc                                                                >  1:14558819/1‑101 (MQ=255)

                                     tACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCAc                                                                >  1:10564562/1‑101 (MQ=255)

                                      aCTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACt                                                               >  1:1214397/1‑101 (MQ=255)

                                      aCTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACt                                                               >  1:2633240/1‑101 (MQ=255)

                                       cTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACtt                                                              >  1:10268281/1‑101 (MQ=255)

                                          acaGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTaaa                                                           <  1:4353604/101‑1 (MQ=255)

                                          acaGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTaaa                                                           >  1:6184065/1‑101 (MQ=255)

                                          acaGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTaaa                                                           >  1:2862404/1‑101 (MQ=255)

                                          acaGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTaaa                                                           >  1:2349497/1‑101 (MQ=255)

                                           caGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCGGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAAt                                                          <  1:10226977/101‑1 (MQ=255)

                                           caGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAAt                                                          <  1:213595/101‑1 (MQ=255)

                                             gggTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATaa                                                        >  1:13633975/1‑101 (MQ=255)

                                             gggTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATaa                                                        <  1:13018099/101‑1 (MQ=255)

                                              ggTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAg                                                       <  1:6423779/101‑1 (MQ=255)

                                                 gATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGa                                                    >  1:12042895/1‑101 (MQ=255)

                                                 gATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGa                                                    >  1:83918/1‑101 (MQ=255)

                                                  aTGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGAt                                                   >  1:312640/1‑101 (MQ=255)

                                                  aTGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGAt                                                   <  1:6709989/101‑1 (MQ=255)

                                                    gCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAg                                                 <  1:10620949/101‑1 (MQ=255)

                                                     cGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGt                                                >  1:4396905/1‑101 (MQ=255)

                                                     cGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGt                                                <  1:13756034/101‑1 (MQ=255)

                                                        gATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCtt                                             >  1:14408037/1‑101 (MQ=255)

                                                         aTAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTa                                            >  1:8040300/1‑101 (MQ=255)

                                                         aTAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTa                                            >  1:12407538/1‑101 (MQ=255)

                                                          tAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTaa                                           <  1:2430470/101‑1 (MQ=255)

                                                            aCTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATa                                         <  1:2550472/101‑1 (MQ=255)

                                                              tGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACt                                       <  1:9135692/101‑1 (MQ=255)

                                                               gACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTa                                      <  1:6448574/101‑1 (MQ=255)

                                                                aCGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAg                                     <  1:5688262/101‑1 (MQ=255)

                                                                aCGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAg                                     >  1:13606821/1‑101 (MQ=255)

                                                                    aaGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGtttt                                 <  1:11468164/101‑1 (MQ=255)

                                                                    aaGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGtttt                                 >  1:1328175/1‑101 (MQ=255)

                                                                    aaGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGtttt                                 <  1:14399881/101‑1 (MQ=255)

                                                                     aGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGttttt                                >  1:12209633/1‑101 (MQ=255)

                                                                     aGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGttttt                                <  1:11872304/101‑1 (MQ=255)

                                                                      ggAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTa                               >  1:12936433/1‑101 (MQ=255)

                                                                         gTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGAc                            <  1:1968848/101‑1 (MQ=255)

                                                                             tgcAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGt                        <  1:14237152/101‑1 (MQ=255)

                                                                              gcAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTc                       <  1:1318901/101‑1 (MQ=255)

                                                                               cAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCa                      >  1:9528487/1‑101 (MQ=255)

                                                                                aGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCAt                     <  1:14194548/101‑1 (MQ=255)

                                                                                  ggATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTg                   >  1:13708823/1‑101 (MQ=255)

                                                                                  ggATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTg                   >  1:7727385/1‑101 (MQ=255)

                                                                                   gATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTgg                  >  1:4908857/1‑101 (MQ=255)

                                                                                         aTGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACa            <  1:4264550/101‑1 (MQ=40)

                                                                                         aTGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACa            <  1:5932457/101‑1 (MQ=40)

                                                                                          tGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAg           >  1:7341710/1‑101 (MQ=40)

                                                                                          tGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAg           <  1:4194558/101‑1 (MQ=40)

                                                                                           ggT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAga          <  1:1759873/101‑1 (MQ=39)

                                                                                             t‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAgatg        >  1:7983619/1‑101 (MQ=37)

                                                                                               cccTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAgatga       >  1:8956965/1‑101 (MQ=35)

                                                                                                ccTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAgatgat      <  1:8109035/101‑1 (MQ=34)

                                                                                                    gTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGAtgattgat  <  1:6621425/101‑1 (MQ=11)

                                                                                                    gTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTACTCATTGGAGAACAGAtgattgat  >  1:741976/1‑101 (MQ=11)

TACATTCAATAAAAAAGTAACCTCATAAAAAATCCTGTACTCACAGGGTGATGCGGGATAACTGACGTAAGGAGTGCTGCAGGGATTTGATGGT‑CCCTTGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGAT  >  NC_007779/4502761‑4502960

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.