| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 2,733,780 | T→A | 11.3% | E296D (GAA→GAT) | rluD ← | 23S rRNA pseudouridine synthase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 2,733,780 | 0 | T→A | 11.3% | 112.9 0.0 ‑0.1 | 301 | E296D (GAA→GAT) | rluD | 23S rRNA pseudouridine synthase |
| Reads supporting (aligned to +/- strand): new base (18/16): ref base (137/130): total (155/146) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.71e-01 | ||||||||||
Only 100 of 339 total aligned reads displayed.
AGCTTACTCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTCCGAAG > NC_007779/2733680‑2733880 | ttACTCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGccattcc > 1:5977561/1‑101 (MQ=255) ttACTCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGccattcc < 1:491154/101‑1 (MQ=255) aCTCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGccattccat < 1:1402312/101‑1 (MQ=255) aCTCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGccattccat > 1:4342769/1‑101 (MQ=255) aCTCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGccattccat < 1:376687/101‑1 (MQ=255) tCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCAttt < 1:2303175/101‑1 (MQ=255) tCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCAATCCAttt > 1:6832735/1‑101 (MQ=255) aTAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCg < 1:11125057/101‑1 (MQ=255) aaCCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGAt > 1:10756777/1‑101 (MQ=255) aaCCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGAt > 1:1379104/1‑101 (MQ=255) aaCCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGAt < 1:12874177/101‑1 (MQ=255) aCCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATg < 1:11228536/101‑1 (MQ=255) ccAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGc < 1:12352896/101‑1 (MQ=255) cAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGcc > 1:5288687/1‑101 (MQ=255) aGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCg < 1:11567849/101‑1 (MQ=255) gTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATGGGCGCATGCCATTCCATTTCGATGCCgg > 1:1665483/1‑101 (MQ=255) tCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGga > 1:13939359/1‑101 (MQ=255) tCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGga < 1:1277073/101‑1 (MQ=255) tCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGga > 1:10053892/1‑101 (MQ=255) tCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCAATCCATTTCGATGCCGga > 1:11418409/1‑101 (MQ=255) cACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCTATGCCGgaga > 1:6465132/1‑101 (MQ=255) cACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGgaga > 1:6393018/1‑101 (MQ=255) cACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGgaga > 1:1343399/1‑101 (MQ=255) cACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGgaga > 1:14473559/1‑101 (MQ=255) cTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATc > 1:891134/1‑101 (MQ=255) ttCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCg > 1:4846015/1‑101 (MQ=255) ttCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCg > 1:7248614/1‑101 (MQ=255) ttCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCg < 1:2272349/101‑1 (MQ=255) cATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCggg < 1:2148685/101‑1 (MQ=255) aTCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCAATCCATTTCGATGCCGGAGATCGGGt > 1:7942183/1‑101 (MQ=255) cTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGAt < 1:11177710/101‑1 (MQ=255) ttATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATa < 1:10155645/101‑1 (MQ=255) aTGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAAAAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATaaa < 1:12125309/101‑1 (MQ=255) tGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAg > 1:12512638/1‑101 (MQ=255) tGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAg > 1:1980855/1‑101 (MQ=255) gTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGa > 1:5624777/1‑101 (MQ=255) ttcttcGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGAc < 1:9277109/101‑1 (MQ=255) ttcttcGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGAc > 1:14177283/1‑101 (MQ=255) ttcttcGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCAATCCATTTCGATGCCGGAGATCGGGTGATAAAggc < 1:10853492/101‑3 (MQ=255) tcttcGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACg < 1:6178701/101‑1 (MQ=255) cttcGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACgc > 1:3866771/1‑101 (MQ=255) ttcGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACgca > 1:13061113/1‑101 (MQ=255) ttcGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACgca > 1:14205836/1‑101 (MQ=255) tcGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACgcag < 1:10980325/101‑1 (MQ=255) gAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACgcagca > 1:5502073/1‑101 (MQ=255) gAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACgcagca < 1:11084656/101‑1 (MQ=255) gAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACgcagca < 1:4984597/101‑1 (MQ=255) aaaTCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCAt > 1:8137184/1‑101 (MQ=255) aaTCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATg > 1:14559313/1‑101 (MQ=255) aTCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATgg > 1:40451/1‑101 (MQ=255) aTCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCAATCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATgg > 1:2936078/1‑101 (MQ=255) tCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGt > 1:838717/1‑101 (MQ=255) cGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGtt > 1:8546496/1‑101 (MQ=255) cGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGtt < 1:10269222/101‑1 (MQ=255) cGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGtt > 1:14375149/1‑101 (MQ=255) gcgcgcATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGc > 1:4774620/1‑101 (MQ=255) gcATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGt > 1:2682810/1‑101 (MQ=255) cATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTa < 1:7289212/101‑1 (MQ=255) cATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTa > 1:9477848/1‑101 (MQ=255) aTCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTac > 1:8276432/1‑100 (MQ=255) aTCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAg < 1:8046567/101‑1 (MQ=255) ccTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGcc > 1:1631522/1‑101 (MQ=255) cTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCt < 1:9201352/101‑1 (MQ=255) cTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCt > 1:6909350/1‑101 (MQ=255) tCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTg < 1:4184185/101‑1 (MQ=255) tCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCAATCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTg > 1:7380797/1‑101 (MQ=255) cAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTgg < 1:7491529/101‑1 (MQ=255) aaTCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCAATCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGc < 1:3088221/101‑1 (MQ=255) tCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCgg > 1:6975534/1‑101 (MQ=255) cTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCaa < 1:6622555/101‑1 (MQ=255) cTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCaa > 1:5159382/1‑101 (MQ=255) caTATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTAc > 1:2559938/1‑101 (MQ=255) caTATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTAc < 1:1063949/101‑1 (MQ=255) caTATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTAc > 1:4468393/1‑101 (MQ=255) atatCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACg > 1:6089104/1‑101 (MQ=255) atatCTTGTGGAATAGGCGCATGCCAATCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACg > 1:13181154/1‑101 (MQ=255) tatCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGc > 1:8680208/1‑101 (MQ=255) tatCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGc > 1:7211454/1‑101 (MQ=255) tatCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGc < 1:8971122/101‑1 (MQ=255) tatCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGc < 1:536532/101‑1 (MQ=255) atCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAGGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCa > 1:9122722/1‑101 (MQ=255) tCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAg > 1:3508941/1‑101 (MQ=255) tCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAg > 1:7783329/1‑101 (MQ=255) cTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGc < 1:7096746/101‑1 (MQ=255) gtgGAGTAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTg < 1:9808673/101‑1 (MQ=255) gtgGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTg > 1:12440393/1‑101 (MQ=255) ggAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGga > 1:2187147/1‑101 (MQ=255) gAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAANGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCNTGgag < 1:3285446/101‑1 (MQ=255) tAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATa < 1:10455785/101‑1 (MQ=255) aGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATaa > 1:9424504/1‑101 (MQ=255) cgcATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATg < 1:9554704/101‑1 (MQ=255) cgcATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATg < 1:4625841/101‑1 (MQ=255) aTGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCtt > 1:11684429/1‑101 (MQ=255) tGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTc < 1:2086701/101‑1 (MQ=255) tGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTc < 1:13568142/101‑1 (MQ=255) tGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTc > 1:3639987/1‑101 (MQ=255) cattccattTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTCCGa > 1:3443574/1‑101 (MQ=255) attccattTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTCCGaa > 1:10367116/1‑101 (MQ=255) ttccattTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTCCGAAg < 1:5774274/101‑1 (MQ=255) ttccattTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTCCGAAg > 1:989371/1‑101 (MQ=255) | AGCTTACTCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTCCGAAG > NC_007779/2733680‑2733880 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |