New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 3186081NA (NA)304 (1.070) 145/178 NT 98.7% coding (26/2466 nt) yqiG outer membrane usher protein
?NC_007779 3512753 = 4 (0.010)coding (529/1026 nt) cytR DNA‑binding transcriptional dual regulator

Only 100 of 823 total aligned reads displayed.

GCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  >  NC_007779/3512653‑3512853
                                                                                                    |                                                                                                    
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      >  1:870299‑M2/101‑101 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      <  1:10428879‑M2/1‑1 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      <  1:12182551‑M2/1‑1 (MQ=255)
catagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatcca                                                                                                      <  1:109294‑M2/1‑1 (MQ=255)
 atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaa                                                                                                     <  1:6308443‑M2/2‑1 (MQ=255)
 atagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtatggaaatataggggcaaatccaa                                                                                                     <  1:8176485‑M2/2‑1 (MQ=255)
  tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAat                                                                                                    <  1:12298008‑M2/3‑1 (MQ=255)
  tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAat                                                                                                    <  1:2832448‑M2/3‑1 (MQ=255)
  tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAat                                                                                                    >  1:14179699‑M2/99‑101 (MQ=255)
   agtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatc                                                                                                   >  1:6375990‑M2/98‑100 (MQ=255)
   agtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatc                                                                                                   <  1:217963‑M2/4‑2 (MQ=255)
    gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatcg                                                                                                  <  1:9575095‑M2/5‑3 (MQ=255)
    gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAatta                                                                                                  <  1:127749‑M2/5‑1 (MQ=255)
     tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAattat                                                                                                 >  1:900914‑M2/96‑101 (MQ=255)
     tgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAattat                                                                                                 <  1:2002589‑M2/6‑1 (MQ=255)
      gcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatc                                                                                                <  1:678758‑M2/7‑2 (MQ=255)
      gcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAattatt                                                                                                <  1:13597407‑M2/7‑1 (MQ=255)
       cgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaattatca                                                                                               <  1:2978493‑M2/8‑3 (MQ=255)
       cgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatcgcta                                                                                               >  1:773249‑M2/94‑96 (MQ=255)
       cTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTa                                                                                               <  1:3361241‑M1/101‑2 (MQ=255)
         gccgccGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTaga                                                                                             >  1:1551513‑M1/1‑98 (MQ=255)
         ctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaatcgctatc                                                                                             <  1:13694394‑M2/10‑8 (MQ=255)
          tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTtata                                                                                            >  1:7840845‑M2/91‑101 (MQ=255)
           cgccgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATCATTagact                                                                                           <  1:13966410‑M1/101‑6 (MQ=255)
            gccgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactg                                                                                          <  1:5057069‑M1/101‑7 (MQ=255)
            gccgATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactg                                                                                          >  1:7080385‑M1/1‑95 (MQ=255)
             gttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGa                                                                                         <  1:6073710‑M2/14‑1 (MQ=255)
               gATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggcc                                                                                       >  1:4653056‑M1/1‑92 (MQ=255)
                  ggTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTCTTagactggccccc                                                                                    <  1:10131010‑M1/101‑13 (MQ=255)
                   gctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAgg                                                                                   <  1:8276118‑M2/20‑1 (MQ=255)
                     tcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGc                                                                                 <  1:9862872‑M2/22‑1 (MQ=255)
                     tcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGc                                                                                 <  1:586173‑M2/22‑1 (MQ=255)
                      cgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCa                                                                                <  1:7551687‑M2/23‑1 (MQ=255)
                          acgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCAtaag                                                                            >  1:12395810‑M2/75‑100 (MQ=255)
                           cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAAc                                                                           >  1:4188244‑M2/74‑101 (MQ=255)
                           cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAAc                                                                           >  1:11548943‑M2/74‑101 (MQ=255)
                            gggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACg                                                                          <  1:6192459‑M2/29‑1 (MQ=255)
                                 tatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTg                                                                     <  1:13423030‑M2/34‑1 (MQ=255)
                                  atctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTgg                                                                    >  1:10804664‑M2/67‑101 (MQ=255)
                                    tGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaacca                                                                  >  1:11964133‑M1/1‑71 (MQ=255)
                                    tGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaacca                                                                  >  1:11300785‑M1/1‑71 (MQ=255)
                                     tgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTg                                                                 >  1:14641734‑M2/64‑101 (MQ=255)
                                      cACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaat                                                                <  1:11730936‑M1/101‑33 (MQ=255)
                                         gcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGtata                                                             <  1:9263141‑M2/42‑1 (MQ=255)
                                          cagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAg                                                            <  1:9098502‑M2/43‑1 (MQ=255)
                                            gcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGcc                                                          <  1:2290791‑M2/45‑1 (MQ=255)
                                            agctggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcact                                                          <  1:11621769‑M1/101‑39 (MQ=255)
                                             gctggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcactt                                                         <  1:10661778‑M1/101‑40 (MQ=255)
                                             cgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCg                                                         <  1:1668997‑M2/46‑1 (MQ=255)
                                              gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCgg                                                        >  1:10542113‑M2/55‑101 (MQ=255)
                                                 gagttgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaat                                                     <  1:4344459‑M1/101‑44 (MQ=255)
                                                  ttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTccc                                                    >  1:7240223‑M2/51‑101 (MQ=255)
                                                     taatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGaa                                                 <  1:13358385‑M2/54‑1 (MQ=255)
                                                      gCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtg                                                >  1:4963431‑M1/1‑53 (MQ=255)
                                                      gCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtg                                                >  1:3077501‑M1/1‑53 (MQ=255)
                                                        cTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgat                                              >  1:12672397‑M1/1‑51 (MQ=255)
                                                          ggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGAt                                            <  1:6578668‑M2/59‑1 (MQ=255)
                                                          ggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGAt                                            >  1:645750‑M2/43‑101 (MQ=255)
                                                          ggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGAt                                            <  1:4772870‑M2/59‑1 (MQ=255)
                                                          aCAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatag                                            <  1:237947‑M1/101‑53 (MQ=255)
                                                           gttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATg                                           >  1:10288149‑M2/42‑101 (MQ=255)
                                                            ttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGACGc                                          >  1:7308583‑M2/41‑101 (MQ=255)
                                                            aGTTCATATCGACAATCTGACCGCCGCATTTTATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtc                                          >  1:5658171‑M1/1‑47 (MQ=255)
                                                            aGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtc                                          >  1:1853688‑M1/1‑47 (MQ=255)
                                                             taagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGcc                                         >  1:6700956‑M2/40‑101 (MQ=255)
                                                                cATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaa                                      <  1:978724‑M1/101‑59 (MQ=255)
                                                                 tgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCtg                                     >  1:11224072‑M2/36‑101 (MQ=255)
                                                                 atatCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaat                                     >  1:5243416‑M1/1‑42 (MQ=255)
                                                                 atatCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaat                                     <  1:14334228‑M1/101‑60 (MQ=255)
                                                                  gataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCtgt                                    <  1:5747007‑M2/67‑1 (MQ=255)
                                                                   ataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCtgtg                                   <  1:394753‑M2/68‑1 (MQ=255)
                                                                    taacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTgtgt                                  >  1:1112588‑M2/33‑101 (MQ=255)
                                                                    tCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatact                                  >  1:3527982‑M1/1‑39 (MQ=255)
                                                                       aCAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagt                               >  1:968818‑M1/1‑36 (MQ=255)
                                                                        cAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtt                              <  1:9402037‑M1/101‑67 (MQ=255)
                                                                         aaTCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttt                             >  1:10031002‑M1/1‑34 (MQ=255)
                                                                          atgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTAc                            >  1:8403630‑M2/27‑101 (MQ=255)
                                                                          aTCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt                            <  1:8560052‑M1/101‑69 (MQ=255)
                                                                             tctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGc                         >  1:8058050‑M2/24‑101 (MQ=255)
                                                                             tGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag                         <  1:14065929‑M1/101‑72 (MQ=255)
                                                                              gACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga                        >  1:3641897‑M1/1‑29 (MQ=255)
                                                                               tggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCt                       >  1:5306125‑M2/22‑101 (MQ=255)
                                                                                 gaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGc                     >  1:1322467‑M2/20‑101 (MQ=255)
                                                                                 cgccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagacta                     <  1:3165753‑M1/101‑76 (MQ=255)
                                                                                    cgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtc                  <  1:14462945‑M1/101‑79 (MQ=255)
                                                                                     tataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAgg                 >  1:2546455‑M2/16‑101 (MQ=255)
                                                                                     tatagaggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAgg                 <  1:2721953‑M2/86‑1 (MQ=255)
                                                                                     gcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtca                 >  1:4502480‑M1/1‑22 (MQ=255)
                                                                                     gcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtca                 <  1:12465121‑M1/101‑80 (MQ=255)
                                                                                      cATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagacaagtcat                <  1:12897866‑M1/101‑81 (MQ=255)
                                                                                      ataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGc                >  1:13890707‑M2/15‑101 (MQ=255)
                                                                                       taggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCt               >  1:13084406‑M2/14‑101 (MQ=255)
                                                                                        tttGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg              <  1:7442532‑M1/101‑83 (MQ=255)
                                                                                        aggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTa              <  1:3763319‑M2/89‑1 (MQ=255)
                                                                                         ggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTAt             >  1:3441480‑M2/12‑101 (MQ=255)
                                                                                          tGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga            <  1:12566435‑M1/101‑85 (MQ=255)
                                                                                          gggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATg            <  1:6948313‑M2/91‑1 (MQ=255)
                                                                                            gcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGtt          <  1:3893030‑M2/93‑1 (MQ=255)
                                                                                                  ccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgcg    <  1:8884011‑M2/99‑1 (MQ=255)
                                                                                                    AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCt  <  1:5474794‑M2/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
GCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCT  >  NC_007779/3512653‑3512853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.