| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 2,733,780 | T→A | 6.8% | E296D (GAA→GAT) | rluD ← | 23S rRNA pseudouridine synthase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 2,733,780 | 0 | T→A | 6.8% | 63.9 ‑0.4 ‑0.1 | 322 | E296D (GAA→GAT) | rluD | 23S rRNA pseudouridine synthase |
| Reads supporting (aligned to +/- strand): new base (10/12): ref base (152/148): total (162/160) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.65e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.24e-01 | ||||||||||
Only 100 of 352 total aligned reads displayed.
AGCTTACTCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTCCGAAG > NC_007779/2733680‑2733880 | aGCTTACTCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGccat > 1:1524014/1‑101 (MQ=255)aGCTTACTCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGccat > 1:11996282/1‑101 (MQ=255) cTTACTCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGccattc > 1:5990788/1‑101 (MQ=255) tACTCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGccattcca < 1:9018301/101‑1 (MQ=255) tACTCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGccattcca > 1:6959951/1‑101 (MQ=255) aCTCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGccattccat > 1:12880367/1‑101 (MQ=255) cTCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGccattccatt < 1:14581233/101‑1 (MQ=255) tCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCAttt > 1:711598/1‑101 (MQ=255) tCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCAttt > 1:7617514/1‑101 (MQ=255) cATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTc > 1:9776115/1‑101 (MQ=255) cATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTc < 1:10639017/101‑1 (MQ=255) cATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCAATCCATTTc < 1:14113746/101‑1 (MQ=255) aTAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCg < 1:12344983/101‑1 (MQ=255) aTAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCg > 1:80636/1‑101 (MQ=255) aaCCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCGCCCCCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGAt < 1:5368312/101‑1 (MQ=255) aCCAGTCCACTTCATCCTTGTGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATg < 1:651444/101‑1 (MQ=255) aCCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATg > 1:10875870/1‑101 (MQ=255) ccAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGc < 1:4623644/101‑1 (MQ=255) ccAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGc < 1:4548893/101‑1 (MQ=255) ccAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGc < 1:8936076/101‑1 (MQ=255) cAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGcc < 1:11666775/101‑1 (MQ=255) tCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGga < 1:2628588/101‑1 (MQ=255) ccACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCCGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGgag > 1:1212658/1‑101 (MQ=255) aCTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGAt > 1:17922/1‑101 (MQ=255) aCTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGAt > 1:4721738/1‑101 (MQ=255) cTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATc > 1:9105194/1‑101 (MQ=255) ttCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCg > 1:13965641/1‑101 (MQ=255) tCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCgg > 1:4385597/1‑101 (MQ=255) cATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCggg > 1:6112136/1‑101 (MQ=255) cATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCggg > 1:11071782/1‑101 (MQ=255) aTCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGt > 1:13706480/1‑101 (MQ=255) aTCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGt > 1:12677206/1‑101 (MQ=255) tCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTg > 1:8842462/1‑101 (MQ=255) tCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTg < 1:12759157/101‑1 (MQ=255) tCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCAATCCATTTCGATGCCGGAGATCGGGTg > 1:5067377/1‑101 (MQ=255) ccTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGa < 1:2577586/101‑1 (MQ=255) ccTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGa > 1:1644690/1‑101 (MQ=255) cTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGAt > 1:2966272/1‑101 (MQ=255) tATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATaa > 1:11912297/1‑101 (MQ=255) aTGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATaaa > 1:12578599/1‑101 (MQ=255) aTGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATaaa < 1:13780461/101‑1 (MQ=255) gTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGa > 1:10170745/1‑101 (MQ=255) ttcttcGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGAc > 1:9875031/1‑101 (MQ=255) ttcttcGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGAc > 1:8136197/1‑101 (MQ=255) ttcGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACgca < 1:3274498/101‑1 (MQ=255) cGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACgcagc < 1:8541144/101‑1 (MQ=255) gAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACgcagca > 1:4599240/1‑101 (MQ=255) aTCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATgg < 1:14523875/101‑1 (MQ=255) tCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGt < 1:6747124/101‑1 (MQ=255) cGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGtt < 1:3060566/101‑1 (MQ=255) cGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGtt < 1:9410969/101‑1 (MQ=255) ggCGCGCATCACCTCAATCGGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTg < 1:3199400/101‑1 (MQ=255) gcATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGt > 1:4074889/1‑101 (MQ=255) gcATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCAATCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGt < 1:9177393/101‑1 (MQ=255) aTCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAg < 1:3933814/101‑1 (MQ=255) aTCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAg < 1:2230884/101‑1 (MQ=255) aTCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAg < 1:11746253/101‑1 (MQ=255) aTCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCAATCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAg > 1:7427135/1‑101 (MQ=255) cACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAgcg > 1:13564364/1‑101 (MQ=255) cACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAgcg > 1:14272978/1‑101 (MQ=255) cACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAgcg > 1:11310555/1‑101 (MQ=255) ccTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGcc > 1:5419931/1‑101 (MQ=255) cAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTgg < 1:7150943/101‑1 (MQ=255) cAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTgg > 1:10460208/1‑101 (MQ=255) cAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCAATCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTgg < 1:11487014/101‑1 (MQ=255) aaTCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGc < 1:7971874/101‑1 (MQ=255) aTCAGCTCCACCATATCTTGTGGAATAGGCGCATGCTATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCg < 1:13491948/101‑1 (MQ=255) aTCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCg > 1:12090718/1‑101 (MQ=255) aTCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCAATCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCg < 1:2003406/101‑1 (MQ=255) cAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGt > 1:9457176/1‑101 (MQ=255) cAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGt < 1:5625952/101‑1 (MQ=255) cAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGt < 1:6537446/101‑1 (MQ=255) aGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTc < 1:982036/101‑1 (MQ=255) cTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCaa > 1:371258/1‑101 (MQ=255) tCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCaaa < 1:6333101/101‑1 (MQ=255) tCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCaaa > 1:12286258/1‑101 (MQ=255) caccaTATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACt < 1:2404926/101‑1 (MQ=255) ccaTATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTa < 1:6640794/101‑1 (MQ=255) caTATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTAc > 1:10029988/1‑101 (MQ=255) caTATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTAc < 1:8467598/101‑1 (MQ=255) caTATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTAc > 1:7507334/1‑101 (MQ=255) atatCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACg > 1:4909707/1‑101 (MQ=255) atCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCa < 1:9318253/101‑1 (MQ=255) tgtgGAATAGGCGCATGCCAATCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGt < 1:8780002/101‑1 (MQ=255) gAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGgag > 1:58702/1‑101 (MQ=255) aaTAGGCGCATGCCAATCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGgaga > 1:10299748/1‑101 (MQ=255) aTAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGAt > 1:7257756/1‑101 (MQ=255) aTAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGAt > 1:10578195/1‑101 (MQ=255) aGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATaa > 1:7559682/1‑101 (MQ=255) ggCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATaaa > 1:5603076/1‑101 (MQ=255) ggCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATaaa < 1:7783338/101‑1 (MQ=255) cgcATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATg < 1:10766371/101‑1 (MQ=255) gcATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGc < 1:13122962/101‑1 (MQ=255) cATGCCAATCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCt < 1:7926096/101‑1 (MQ=255) tGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTc < 1:3121711/101‑1 (MQ=255) tGCCATTCCATTTCGATGCCGGAGATCGGGGGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTc > 1:2897949/1‑101 (MQ=255) ccattccattTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTCCg > 1:955989/1‑101 (MQ=255) cattccattTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTCCGa < 1:1365918/101‑1 (MQ=255) attccattTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTCCGaa > 1:345448/1‑101 (MQ=255) ttccattTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTCCGAAg > 1:1161767/1‑101 (MQ=255) | AGCTTACTCATAACCAGTCCACTTCATCCTTATGTTCTTCGAAATCGGCGCGCATCACCTCAATCAGCTCCACCATATCTTGTGGAATAGGCGCATGCCATTCCATTTCGATGCCGGAGATCGGGTGATAAAGACGCAGCATGGTTGCATGTAGCGCCTGGCGGTCAAACTTACGCAGCGTGGAGATAAATGCTTCCGAAG > NC_007779/2733680‑2733880 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |