| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 4,371,467 | Δ1 bp | 22.9% | intergenic (‑202/+104) | dcuA ← / ← aspA | C4‑dicarboxylate antiporter/aspartate ammonia‑lyase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 4,371,467 | 0 | G→. | 22.9% | 0.0 ‑1.2 ‑0.8 | 363 | intergenic (‑202/+104) | dcuA/aspA | C4‑dicarboxylate antiporter/aspartate ammonia‑lyase |
| Reads supporting (aligned to +/- strand): new base (33/50): ref base (105/118): total (162/201) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.01e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.47e-01 | ||||||||||
Only 100 of 366 total aligned reads displayed.
TCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCTTTTTTATTTGTACTACCCTGTA > NC_007779/4371367‑4371567 | ccGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGt < 1:7264819/101‑1 (MQ=255) cGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGtt < 1:9182200/101‑1 (MQ=255) cGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGtt < 1:8272490/101‑1 (MQ=255) cGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGtt > 1:6002475/1‑101 (MQ=255) cTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGttttt < 1:4012937/101‑1 (MQ=255) cTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGttttt > 1:6558592/1‑101 (MQ=255) cTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGttttt < 1:12033484/101‑1 (MQ=255) aaaaCCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAAc > 1:6940059/1‑101 (MQ=255) aaaCCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACa < 1:5078292/101‑1 (MQ=255) aaCCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACaa < 1:7489420/101‑1 (MQ=255) aaCCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACaa < 1:11082526/101‑1 (MQ=255) aCCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAg < 1:5746966/101‑1 (MQ=255) aCCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAg > 1:13965904/1‑101 (MQ=255) ccAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTTTTTTTTAACAAGt > 1:5804652/1‑101 (MQ=255) cAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGtt < 1:3817080/101‑1 (MQ=255) cAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGtt > 1:9502274/1‑101 (MQ=255) cAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGAGCGCCAGCAAAACCATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTg < 1:4269006/101‑1 (MQ=255) aaTCCCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTTTTTTTTAACAAGTTg < 1:1115688/101‑1 (MQ=255) aaTACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTg > 1:12199231/1‑101 (MQ=255) aTACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTTTTTTTTAACAAGTTGa > 1:6635224/1‑101 (MQ=255) tACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGat < 1:1959118/101‑1 (MQ=255) tACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGat < 1:4407713/101‑1 (MQ=255) ccTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTTTTTTTTAACAAGTTGatat < 1:3000363/101‑1 (MQ=255) cTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATAtt > 1:12102305/1‑101 (MQ=255) cTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTa > 1:2579949/1‑101 (MQ=255) aTTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTTTTTTTTAACAAGTTGATATTAg > 1:12659002/1‑101 (MQ=255) ttCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTTTTTTTTAACAAGTTGATATTAGa < 1:14458162/101‑1 (MQ=255) tCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGAt < 1:5880456/101‑1 (MQ=255) tCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGAtt > 1:2504523/1‑101 (MQ=255) ccccAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGt < 1:8100841/101‑1 (MQ=255) cccAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTa < 1:2420564/101‑1 (MQ=255) ccAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTTTTTTTTAACAAGTTGATATTAGATTGTTa > 1:5359788/1‑101 (MQ=255) ccAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTa > 1:14176212/1‑101 (MQ=255) cAATCTGGCGCCCACGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTAtt < 1:10524566/101‑1 (MQ=255) aTCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTAttt > 1:5266573/1‑101 (MQ=255) aTCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTAttt < 1:415477/101‑1 (MQ=255) aTCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTAtttt < 1:12969126/101‑1 (MQ=255) cTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTAttttt > 1:10876132/1‑101 (MQ=255) cTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTa > 1:7044622/1‑101 (MQ=255) ggCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTaa > 1:11468404/1‑101 (MQ=255) ggCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTaa < 1:10065108/101‑1 (MQ=255) ggCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAg < 1:5612407/101‑1 (MQ=255) cgcCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGtt < 1:3906991/101‑1 (MQ=255) gcCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGtt < 1:8667896/101‑1 (MQ=255) cccAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCCTTTTTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGtt < 1:10309208/101‑1 (MQ=255) cccAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTTTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTa > 1:10269990/1‑101 (MQ=255) ccAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTTTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTAc < 1:3196656/101‑1 (MQ=255) ccAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTAc < 1:4853880/101‑1 (MQ=255) cAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACt > 1:6218633/1‑101 (MQ=255) cAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACt > 1:3092160/1‑101 (MQ=255) aagaagATCGCCAGCAAAACTATGATGAGTTCTACAACGAGCATCTTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGc < 1:10564512/101‑1 (MQ=255) gaagaTCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTTTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCt > 1:13126605/1‑101 (MQ=255) gaagaTCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTc > 1:2827120/1‑101 (MQ=255) gaTCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTcac < 1:11896939/101‑1 (MQ=255) gaTCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTcaca < 1:12496513/101‑1 (MQ=255) tCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACaa > 1:6068974/1‑101 (MQ=255) cGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAg < 1:6519814/101‑1 (MQ=255) cGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGa > 1:1349543/1‑101 (MQ=255) gCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGa > 1:13575516/1‑101 (MQ=255) gCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGaa < 1:4951073/101‑1 (MQ=255) cAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGaaaa < 1:11821965/101‑1 (MQ=255) aGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGaaaa < 1:5374298/101‑1 (MQ=255) gCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGaaaaaa > 1:4723562/1‑101 (MQ=255) cAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTTTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGaaaaaa < 1:14033643/101‑1 (MQ=255) aaaaCTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTTTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAg < 1:6815403/101‑1 (MQ=255) aaaCTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGc < 1:4324652/101‑1 (MQ=255) aCTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCa < 1:13344666/101‑1 (MQ=255) tATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGt > 1:9634850/1‑101 (MQ=255) atgatgAGTTCTACAACTAGCATATTAGCCTTCC‑TTTTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGt < 1:7960910/101‑1 (MQ=255) atgatgAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGt > 1:81852/1‑101 (MQ=255) atgatgAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGt > 1:6186446/1‑101 (MQ=255) gatgaGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCa < 1:357652/101‑1 (MQ=255) gatgaGTTCTACAACTAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCAt < 1:8376568/101‑1 (MQ=255) gatgaGTTCTACAACTAGCATATTAGCCTTAC‑TTTTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCa > 1:13857183/1‑101 (MQ=255) atgaGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCAt < 1:13727405/101‑1 (MQ=255) atgaGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCAt > 1:8508541/1‑101 (MQ=255) aGTTCTACAACTAGCATATTAGCCTTCC‑TTTTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTg > 1:1536011/1‑101 (MQ=255) ttCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGAc < 1:4091950/101‑1 (MQ=255) tCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACg < 1:12711471/101‑1 (MQ=255) cTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGt > 1:2249930/1‑101 (MQ=255) tACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTg > 1:7074165/1‑101 (MQ=255) tACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTg < 1:12814977/101‑1 (MQ=255) cAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGcc > 1:2847236/1‑101 (MQ=255) cTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCttt < 1:9405193/101‑1 (MQ=255) tAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCtttt > 1:9707872/1‑101 (MQ=255) tAGCATATTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCttttt < 1:13229607/101‑1 (MQ=255) aGCATATTAGCCCTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCttttt > 1:7876544/1‑101 (MQ=255) cATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCTTTTTTa < 1:9116540/101‑1 (MQ=255) atatTAGCCTTCC‑TTTTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCTTTTTTAt < 1:10184776/101‑1 (MQ=255) atatTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCTTTTTTAt > 1:13281085/1‑101 (MQ=255) atatTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCTTTTTTAtt > 1:5158976/1‑101 (MQ=255) tatTAGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCTTTTTTAttt < 1:670663/101‑1 (MQ=255) tatTAGCCTTCC‑TT‑TGTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCTCGTCATCTGACGTGCCTTTTTTAttt < 1:11385945/101‑1 (MQ=255) tAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCTTTTTTATTTGt < 1:888219/101‑1 (MQ=255) aGCCTTCC‑TT‑TTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCTTTTTTATTTGtac > 1:2728749/1‑101 (MQ=255) gCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCTTTTTTATTTGtac > 1:3285156/1‑101 (MQ=255) gCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCTTTTTTATTTGtac < 1:5645077/101‑1 (MQ=255) ccttcc‑ttGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCTTTTTTATTTGtact < 1:10651665/101‑1 (MQ=255) ttcc‑ttGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCTTTTTTATTTGtactac < 1:1867233/101‑1 (MQ=255) c‑ttGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCTTTTTTATTTGTACTACACt < 1:3655032/101‑1 (MQ=255) | TCCGCCTGCAAAACCAATACCTATTCCCCCCAATCTGGCGCCCAAGAAGATCGCCAGCAAAACTATGATGAGTTCTACAACTAGCATATTAGCCTTCC‑TTGTTTTTTAACAAGTTGATATTAGATTGTTATTTTTAAGTTACTGCTCACAAGAAAAAAGGCACGTCATCTGACGTGCCTTTTTTATTTGTACTACCCTGTA > NC_007779/4371367‑4371567 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |