BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	380484 =	NA (NA)	25 (0.090)	24/180	NT	6.2%	intergenic (‑418/‑46)	yaiO/insC	hypothetical protein/IS2 insertion element repressor InsA
*	?	NC_007779	675203 =	378 (1.400)	25 (0.090)	24/180	NT	6.2%	coding (3/2583 nt)	leuS	leucyl‑tRNA synthetase

Only 100 of 494 total aligned reads displayed.

ACTTCTCTTTGCTCTCGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCGCATAGCATAGCCCAAACGTCCGCGTCAAAACAG  >  NC_007779/675103‑675303

 tcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCa                                                                                                     >  1:4342181‑M2/100‑101 (MQ=255)

  ttCTCTTTGCTCTCGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCAt                                                                                                    >  1:9038625/1‑101 (MQ=255)

  ttCTCTTTGCTCTCGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCAt                                                                                                    >  1:10771660/1‑101 (MQ=255)

    ctctTTGCTCTCGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATgg                                                                                                  <  1:7271262/101‑1 (MQ=255)

      ctTTGCTCTCGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCa                                                                                                >  1:4290346/1‑101 (MQ=255)

       tttGCTCTCGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGtgg                                                                                               <  1:11793042‑M2/101‑4 (MQ=255)

       tttGCTCTCGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAg                                                                                               <  1:9511228/101‑1 (MQ=255)

        ttGCTCTCGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGtgga                                                                                              <  1:11651832‑M2/101‑5 (MQ=255)

         tGCTCTCGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGcc                                                                                             >  1:6539986/1‑101 (MQ=255)

         tGCTCTCGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGcc                                                                                             >  1:8596886/1‑101 (MQ=255)

          gCTCTCGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCa                                                                                            <  1:452350/101‑1 (MQ=255)

            tctcGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGt                                                                                          >  1:227600/1‑101 (MQ=255)

            tctcGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGt                                                                                          >  1:2163824/1‑101 (MQ=255)

            tctcGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGt                                                                                          >  1:690227/1‑101 (MQ=255)

             ctcGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTg                                                                                         <  1:14349564/101‑1 (MQ=255)

              tcGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTgg                                                                                        <  1:1239604/101‑1 (MQ=255)

                gTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTc                                                                                      <  1:4649204/101‑1 (MQ=255)

                 tCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTcc                                                                                     >  1:6573676/1‑101 (MQ=255)

                  cTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCt                                                                                    <  1:10486083/101‑1 (MQ=255)

                   ttCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTg                                                                                   >  1:10417112/1‑101 (MQ=255)

                    tCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGt                                                                                  >  1:7117538/1‑101 (MQ=255)

                     cGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGtt                                                                                 <  1:8309842/101‑1 (MQ=255)

                     cGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGtt                                                                                 >  1:2382251/1‑101 (MQ=255)

                      ggctACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGttt                                                                                >  1:12148916/4‑101 (MQ=255)

                      ggTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGttt                                                                                <  1:12047034/101‑1 (MQ=255)

                      ggTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGttt                                                                                >  1:4732889/1‑101 (MQ=255)

                      ggTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGttt                                                                                >  1:6392223/1‑101 (MQ=255)

                        ttACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGtggatttgcccctatattcc                                                                              >  1:8726975‑M2/1‑81 (MQ=255)

                        ttACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTc                                                                              <  1:8949740/101‑1 (MQ=255)

                        ttACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTc                                                                              >  1:2500086/1‑101 (MQ=255)

                         tACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCa                                                                             <  1:3808356/101‑1 (MQ=255)

                         tACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCa                                                                             >  1:10170277/1‑101 (MQ=255)

                         tACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCa                                                                             <  1:4422178/101‑1 (MQ=255)

                            ttCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATa                                                                          <  1:5798082/101‑1 (MQ=255)

                             tCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATAc                                                                         <  1:13117685/101‑1 (MQ=255)

                              cAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGtggatttgcccctatatttccagaca                                                                        >  1:885960‑M2/1‑75 (MQ=255)

                              cAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACg                                                                        >  1:3687725/1‑101 (MQ=255)

                              cAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACg                                                                        >  1:14051348/1‑101 (MQ=255)

                               aaaTGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACgg                                                                       >  1:10617584/1‑101 (MQ=255)

                                 aTGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCt                                                                     >  1:9160062/1‑101 (MQ=255)

                                 aTGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCt                                                                     <  1:3493865/101‑1 (MQ=255)

                                  tgtgCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTa                                                                    >  1:6184288/1‑101 (MQ=255)

                                  tgtgCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTa                                                                    <  1:3647153/101‑1 (MQ=255)

                                  actagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTa                                                                    <  1:6091050‑M2/35‑1 (MQ=255)

                                     gcgcTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACaa                                                                 >  1:771941/1‑101 (MQ=255)

                                      cgcTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACaaa                                                                <  1:13279305/101‑1 (MQ=255)

                                         ttCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGtggatttgcccctatatttccagacatctgttatcac                                                             <  1:5451057‑M2/101‑38 (MQ=255)

                                         ttCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGt                                                             >  1:11612644/1‑101 (MQ=255)

                                         ttCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGt                                                             >  1:10922702/1‑101 (MQ=255)

                                             gactatcacttatttaagtgatagtggttgtctggagattcagggggccagtctaCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTGCAAATGTAGCg                                                         <  1:331132‑M2/46‑1 (MQ=255)

                                             cATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGtggatttgcccctatatttccagacatctgttatcacttaa                                                         <  1:11080391‑M2/101‑42 (MQ=255)

                                              actatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGt                                                        <  1:4005222‑M2/47‑1 (MQ=255)

                                               tCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGtt                                                       <  1:12798762/101‑1 (MQ=255)

                                                cccAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTg                                                      >  1:13779938/1‑101 (MQ=255)

                                                 ccAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGa                                                     <  1:9289597/101‑1 (MQ=255)

                                                  cAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAg                                                    >  1:12722592/1‑101 (MQ=255)

                                                    aTGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAggt                                                  <  1:1677891/101‑1 (MQ=255)

                                                     tGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAggtg                                                 <  1:5646849/101‑1 (MQ=255)

                                                     tGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAggtg                                                 <  1:11157634/101‑1 (MQ=255)

                                                     cttatttaagtgatattggttgtctggagattcagggggccagtctaCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAggtg                                                 >  1:9808335‑M2/48‑101 (MQ=255)

                                                      gAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAggtgg                                                >  1:698685/1‑101 (MQ=255)

                                                       aaGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAggtggt                                               >  1:13586690/1‑101 (MQ=255)

                                                       aaGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAggtggt                                               <  1:14221399/101‑1 (MQ=255)

                                                         gCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGttt                                             <  1:8137418/101‑1 (MQ=255)

                                                          cTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGtttt                                            >  1:6737818/1‑101 (MQ=255)

                                                           tGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGttttt                                           <  1:4943732/101‑1 (MQ=255)

                                                             tcagttGGACTCTATCCCTCCCCGGCGGTATTGCTCCTGCGTCGCAGGCAGTAGTCCTGTTTTCAATGCGGCTACAAATGTAGCGTTGAGGTGGGCTTTCa                                         <  1:1413838/97‑1 (MQ=255)

                                                             tACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgc                                         >  1:12462343‑M2/1‑44 (MQ=255)

                                                             tACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCa                                         <  1:10011691/101‑1 (MQ=255)

                                                              aCTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAg                                        >  1:4920829/1‑101 (MQ=255)

                                                               cTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGa                                       <  1:13006103/101‑1 (MQ=255)

                                                                tttGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGAt                                      <  1:1522123/101‑1 (MQ=255)

                                                                   ggATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATcct                                   <  1:7191103/101‑2 (MQ=255)

                                                                   ggATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCg                                   <  1:11224170/101‑1 (MQ=255)

                                                                   ggATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCg                                   <  1:7953278/101‑1 (MQ=255)

                                                                     aTTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCgca                                 >  1:9623679/1‑101 (MQ=255)

                                                                     aTTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCgca                                 <  1:7537145/101‑1 (MQ=255)

                                                                       tCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCgcata                               <  1:4117388/101‑1 (MQ=255)

                                                                       tCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCgcata                               <  1:2094018/101‑1 (MQ=255)

                                                                         tgtctggagattcagggggccagtctaCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCgcatagc                             >  1:5958065‑M2/28‑101 (MQ=255)

                                                                           tctcTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCgcatagcat                           >  1:2938148/1‑101 (MQ=255)

                                                                           tctcTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCgcatagcat                           <  1:5593964/101‑1 (MQ=255)

                                                                            ctctTCCGGGCGGTATTGCTCTTGCATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcc                          <  1:2791491‑M2/101‑73 (MQ=255)

                                                                                 ccGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCGCATAGCATAGCCCa                     <  1:8443320/101‑1 (MQ=255)

                                                                                  cGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCGCATAGCATAGCCCaa                    >  1:2671804/1‑101 (MQ=255)

                                                                                   gggCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCGCATAGCATAGCCCaaa                   >  1:11537898/1‑101 (MQ=255)

                                                                                    ggCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATGCGGCTACAAATGTAGCGTTGAGGTGGTTTTTCGGATCCGAATAGGATGGCCCAAAc                  >  1:5324833/1‑101 (MQ=255)

                                                                                     gCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCGCATAGCATAGCCCAAACg                 >  1:7887594/1‑101 (MQ=255)

                                                                                     gCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCGCATAGCATAGCCCAAACg                 >  1:1261274/1‑101 (MQ=255)

                                                                                      cGGTATTGTTATTGCATGGCCGCCTGTCGTCCTGTTTTCCATACGGCTAAAAATGTAGCGTTGAGGTTGTTTTTCAGATCCGCATAGCATAACCCTAACGt                <  1:6294148/101‑1 (MQ=255)

                                                                                       ggTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCGCATAGCATAGCCCAAACGTc               <  1:11915980/101‑1 (MQ=255)

                                                                                       ggTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCGCATAGCATAGCCCAAACGTc               >  1:10336810/1‑101 (MQ=255)

                                                                                       ggTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTAAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCGCATAGCATAGCCCAAACGTc               >  1:1962983/1‑101 (MQ=255)

                                                                                            tGCTCTTGCATGGtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataac          <  1:5019757‑M2/101‑89 (MQ=255)

                                                                                              ctctTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCGCATAGCATAGCCCAAACGTCCGCGTCa        <  1:1767012/101‑1 (MQ=255)

                                                                                                ctTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCGCATAGCATAGCCCAAACGTCCGCGTCaaa      <  1:1228136/101‑1 (MQ=255)

                                                                                                ctTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCGCATAGCATAGCCCAAACGTCCGCGTCaaa      <  1:11370112/101‑1 (MQ=255)

                                                                                                 ttGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCGCATAGCATAGCCCAAACGTCCGCGTCaaaa     >  1:7823298/1‑101 (MQ=255)

                                                                                                    cATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCGCATAGCATAGCCCAAACGTCCGCGTCAAAACAg  >  1:3228340/1‑101 (MQ=255)

                                                                                                    cATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCGCATAGCATAGCCCAAACGTCCGCGTCAAAACAg  <  1:10117469/101‑1 (MQ=255)

ACTTCTCTTTGCTCTCGTCTTCGGTTACTTCAAATGTGCGCTTCTCATCCCAATGAAGCTGTACTTTGGATTCTATCTCTTCCGGGCGGTATTGCTCTTGCATGGCAGCCAGTGGTCCTGTTTTCAATACGGCTACAAATGTAGCGTTGAGGTGGTTTTTCAGATCCGCATAGCATAGCCCAAACGTCCGCGTCAAAACAG  >  NC_007779/675103‑675303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.