New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 32657770 (0.000)262 (1.130) 144/180 NT 100% coding (107/990 nt) tdcB catabolic threonine dehydratase, PLP‑dependent
?NC_007779 3365411 = NA (NA)intergenic (+368/+146) yhcD/insH outer membrane protein/IS5 transposase and trans‑activator

Only 100 of 685 total aligned reads displayed.

CAGTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAAT  >  NC_007779/3265677‑3265877
                                                                                                    |                                                                                                    
ctgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTaa                                                                                                      >  1:7935780‑M2/98‑101 (MQ=255)
cAGTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTaa                                                                                                      >  1:7232813/1‑101 (MQ=255)
 aGTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAg                                                                                                     <  1:10520943‑M1/101‑2 (MQ=255)
  gTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAgg                                                                                                    >  1:3361933‑M1/1‑99 (MQ=255)
  gTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAgg                                                                                                    >  1:1830364‑M1/1‑99 (MQ=255)
   tcggcgaaggtaagttgatgactcatgatgaaccctgttctatggcaccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAAt                                                                                                   >  1:8438311‑M2/95‑101 (MQ=255)
   tGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAgga                                                                                                   <  1:9597157‑M1/101‑4 (MQ=255)
    cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATa                                                                                                  >  1:1493499‑M2/94‑101 (MQ=255)
     ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagttgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAg                                                                                                 <  1:9178549‑M2/9‑1 (MQ=255)
      gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccctaaatgaat                                                                                                <  1:4102126‑M2/10‑6 (MQ=255)
       cTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggt                                                                                               <  1:8703099‑M1/101‑8 (MQ=255)
       cTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggt                                                                                               >  1:9294330‑M1/1‑94 (MQ=255)
         aaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccctaaatgaatggc                                                                                             <  1:5655968‑M2/13‑9 (MQ=255)
          aggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccctaaatgaatggca                                                                                            <  1:8527952‑M2/14‑10 (MQ=255)
          aaTTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggtgcg                                                                                            <  1:2308304‑M1/101‑11 (MQ=255)
           ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccctaaatgaatggcat                                                                                           <  1:2420261‑M2/15‑11 (MQ=255)
           ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAg                                                                                           <  1:3187421‑M2/15‑1 (MQ=255)
           aTTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggtgcga                                                                                           >  1:7993699‑M1/1‑90 (MQ=255)
             taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCg                                                                                         >  1:10012180‑M2/85‑101 (MQ=255)
             taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCg                                                                                         >  1:8832994‑M2/85‑101 (MQ=255)
              aagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGa                                                                                        >  1:9221932‑M2/84‑101 (MQ=255)
               attaAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggtgcgaataa                                                                                       >  1:6039895‑M1/1‑86 (MQ=255)
                ttaAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggtgcgaataag                                                                                      <  1:3818983‑M1/101‑17 (MQ=255)
                  tgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCa                                                                                    >  1:11333420‑M2/80‑101 (MQ=255)
                      gcgcCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggtgcgaataagcgggga                                                                                <  1:2979434‑M1/101‑23 (MQ=255)
                       cgcCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggtgcgaataagcggggaa                                                                               <  1:1174932‑M1/101‑24 (MQ=255)
                       actcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCt                                                                               >  1:4733268‑M2/75‑101 (MQ=255)
                          cACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggtgcgaataagcggggaaatt                                                                            >  1:11641647‑M1/1‑75 (MQ=255)
                           atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttagcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGttt                                                                           <  1:7814836‑M2/31‑1 (MQ=255)
                                ttttAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggtgcgaataagcggggaaattcttctc                                                                      >  1:5448083‑M1/1‑69 (MQ=255)
                                gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATaa                                                                      <  1:8056010‑M2/36‑1 (MQ=255)
                                    cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTc                                                                  <  1:4611862‑M2/40‑1 (MQ=255)
                                    cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTc                                                                  <  1:10803346‑M2/40‑1 (MQ=255)
                                      tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGc                                                                <  1:1262746‑M2/42‑1 (MQ=255)
                                      aTGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggtgcgaataagcggggaaattcttctcggctga                                                                >  1:3743673‑M1/1‑63 (MQ=255)
                                         tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCcca                                                             >  1:6561718‑M2/57‑101 (MQ=255)
                                         tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCcca                                                             <  1:5545383‑M2/45‑1 (MQ=255)
                                         tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCcca                                                             <  1:10127418‑M2/45‑1 (MQ=255)
                                              ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCccagccag                                                        <  1:6418092‑M2/50‑1 (MQ=255)
                                              gTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtca                                                        >  1:8982452‑M1/1‑55 (MQ=255)
                                               gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGt                                                       <  1:282830‑M2/51‑1 (MQ=255)
                                               gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGt                                                       >  1:10992756‑M2/51‑101 (MQ=255)
                                                       atatTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc                                               <  1:10430978‑M1/101‑56 (MQ=255)
                                                         atTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt                                             >  1:3106364‑M1/1‑44 (MQ=255)
                                                         atTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt                                             >  1:9028639‑M1/1‑44 (MQ=255)
                                                          caaacatgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGc                                            >  1:6766867‑M2/40‑101 (MQ=255)
                                                           tttCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttca                                           >  1:7586579‑M1/1‑42 (MQ=255)
                                                           aaacatgatctcatatcagggacttgttctcaccttccCTAAAATAGTTGGAGCGAGGTATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCt                                           <  1:4211825‑M2/63‑1 (MQ=255)
                                                            ttCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcat                                          >  1:2137329‑M1/1‑41 (MQ=255)
                                                               atgatctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCaa                                       >  1:1948779‑M2/35‑101 (MQ=255)
                                                                tgatctcatatcagggacttgttcgcgccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCaat                                      <  1:6118816‑M2/68‑1 (MQ=255)
                                                                   tctcatatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCaataat                                   <  1:8777779‑M2/71‑1 (MQ=255)
                                                                     cAGGAATATTTCGCCTTTGCAACGTTCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagcc                                 <  1:6902110‑M1/101‑70 (MQ=255)
                                                                      catatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGtc                                >  1:6363916‑M2/28‑101 (MQ=255)
                                                                       ggAATATTTCACCTTTGCAACGTTCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga                               >  1:2019053‑M1/1‑30 (MQ=255)
                                                                        tatcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGtcat                              >  1:4895046‑M2/26‑101 (MQ=255)
                                                                         atcagggacttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGtcatc                             >  1:7137579‑M2/25‑101 (MQ=255)
                                                                               tCACCTTTGCAACGTTCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct                       <  1:10709292‑M1/101‑80 (MQ=255)
                                                                                acttgttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCa                      >  1:98536‑M2/18‑101 (MQ=255)
                                                                                    gttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCg                  <  1:5306770‑M2/88‑1 (MQ=255)
                                                                                     ttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCgg                 >  1:8598362‑M2/13‑101 (MQ=255)
                                                                                     ttcgcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCgg                 <  1:8344313‑M2/89‑1 (MQ=255)
                                                                                     ttGCAACGTTCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta                 <  1:5213304‑M1/101‑86 (MQ=255)
                                                                                       tgatttatacctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa               >  1:9396895‑M1/11‑14 (MQ=255)
                                                                                        gcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAg              >  1:11113881‑M2/10‑101 (MQ=255)
                                                                                        gcaccttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAg              <  1:4967539‑M2/92‑1 (MQ=255)
                                                                                        cAACGTTCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat              <  1:10162894‑M1/101‑89 (MQ=255)
                                                                                        cAACGTTCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat              <  1:11601833‑M1/101‑89 (MQ=255)
                                                                                         atttatacctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg             >  1:10560217‑M1/9‑12 (MQ=255)
                                                                                         atttatacctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg             <  1:8878990‑M1/93‑90 (MQ=255)
                                                                                         aaCGTTCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg             >  1:1753769‑M1/1‑12 (MQ=255)
                                                                                          accttccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGAt            >  1:4331546‑M2/8‑101 (MQ=255)
                                                                                            tttgcctaaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct          >  1:10899337‑M1/6‑9 (MQ=255)
                                                                                            gTTCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct          >  1:10666259‑M1/1‑9 (MQ=255)
                                                                                             ttCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt         <  1:5788631‑M1/101‑94 (MQ=255)
                                                                                             ttCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt         <  1:6674398‑M1/101‑94 (MQ=255)
                                                                                             ttCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt         <  1:7444580‑M1/101‑94 (MQ=255)
                                                                                             ttCACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt         <  1:4013506‑M1/101‑94 (MQ=255)
                                                                                              tccCTAAAATTGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTa        <  1:7700354‑M2/98‑1 (MQ=255)
                                                                                              tccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTa        <  1:5095371‑M2/98‑1 (MQ=255)
                                                                                              tccCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTa        <  1:6174518‑M2/98‑1 (MQ=255)
                                                                                               cACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttga       <  1:7557126‑M1/101‑96 (MQ=255)
                                                                                               cACTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttga       <  1:9694171‑M1/101‑96 (MQ=255)
                                                                                                cCTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATg      <  1:1598132‑M2/100‑1 (MQ=255)
                                                                                                 cTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttgatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat     >  1:5719731‑M1/1‑4 (MQ=255)
                                                                                                 cTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat     >  1:7362358‑M1/1‑4 (MQ=255)
                                                                                                 cTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat     <  1:11469426‑M1/101‑98 (MQ=255)
                                                                                                 cTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaat     >  1:2662405‑M1/1‑4 (MQ=255)
                                                                                                 cTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGt     <  1:3615931/101‑1 (MQ=255)
                                                                                                  tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc    <  1:4438850‑M1/101‑99 (MQ=255)
                                                                                                  tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc    >  1:11192800‑M1/1‑3 (MQ=255)
                                                                                                  tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc    <  1:9793793‑M1/101‑99 (MQ=255)
                                                                                                  tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc    <  1:9274119‑M1/101‑99 (MQ=255)
                                                                                                   aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca   <  1:6222634‑M1/101‑100 (MQ=255)
                                                                                                   aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca   <  1:1370948‑M1/101‑100 (MQ=255)
                                                                                                   aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca   >  1:8232123‑M1/1‑2 (MQ=255)
                                                                                                   aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca   <  1:2715983‑M1/101‑100 (MQ=255)
                                                                                                   aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca   >  1:3443939‑M1/1‑2 (MQ=255)
                                                                                                    aggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcag  >  1:6962226‑M1/1‑1 (MQ=255)
                                                                                                    aaaTAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAat  >  1:10321727/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
CAGTGAACTTAATTTATTAAATGCGCCACGAATTTTAAATGAACCCGTACGCTGCATATTTTCAAACTTCAGGAATATTTCACCTTTGCAACGTTCACTAAAATAGTTGGAGCGAGGCATGCCTGTTTTATAAATTCGCCCAGCCAGTCGTTGTTTCGCTTCAATAATGTCATCAATAGCAACCGGCAGATCGTATGTAAT  >  NC_007779/3265677‑3265877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.