New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 37505900 (0.000)256 (1.150) 132/172 NT 100% intergenic (‑104/‑69) tnaA/insH tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent/IS5 element protein
?NC_007779 3751790 = 0 (0.000)intergenic (+151/+116) insH/tnaC IS5 element protein/tryptophanase leader peptide

Only 100 of 300 total aligned reads displayed.

ATAATCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG  >  NC_007779/3750490‑3750689
                                                                                                    |                                                                                                   
aTAATCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAA                                                                                                     >  1:5047542‑M1/1‑101 (MQ=255)
aTAATCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAA                                                                                                     <  1:11394835‑M1/101‑1 (MQ=255)
 tAATCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGCTATATATGCAAGCACCATCATTTACTAAa                                                                                                    >  1:3764568‑M1/1‑100 (MQ=255)
  aaTCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaa                                                                                                   >  1:9320740‑M1/1‑99 (MQ=255)
  aaTCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaa                                                                                                   <  1:1505226‑M1/101‑3 (MQ=255)
  aaTCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaa                                                                                                   <  1:707759‑M1/101‑3 (MQ=255)
   aTCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaac                                                                                                  >  1:5956552‑M1/1‑98 (MQ=255)
   aTCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaac                                                                                                  >  1:6674495‑M1/1‑98 (MQ=255)
    tCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaaca                                                                                                 <  1:10161468‑M1/101‑5 (MQ=255)
     ccTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaa                                                                                                >  1:11411975‑M1/1‑96 (MQ=255)
      cTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaag                                                                                               <  1:9500363‑M1/101‑7 (MQ=255)
      cTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaag                                                                                               <  1:1194783‑M1/101‑7 (MQ=255)
       ttCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagt                                                                                              >  1:3000335‑M1/1‑94 (MQ=255)
       ttCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagt                                                                                              <  1:3412304‑M1/101‑8 (MQ=255)
       ttCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagt                                                                                              <  1:1571686‑M1/101‑8 (MQ=255)
       ttCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagt                                                                                              >  1:8619393‑M1/1‑94 (MQ=255)
         cATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaa                                                                                            <  1:2437191‑M1/101‑10 (MQ=255)
            ttatttTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaata                                                                                         <  1:1032601‑M1/101‑13 (MQ=255)
             tatttTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataa                                                                                        >  1:6788707‑M1/1‑88 (MQ=255)
             tatttTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataa                                                                                        >  1:4930787‑M1/1‑88 (MQ=255)
               ttttAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaac                                                                                      <  1:1027189‑M1/101‑16 (MQ=255)
                tttAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacg                                                                                     >  1:6954559‑M1/1‑85 (MQ=255)
                tttAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacg                                                                                     >  1:7194210‑M1/1‑85 (MQ=255)
                   aaTTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgaga                                                                                  >  1:7369455‑M1/1‑82 (MQ=255)
                   aaTTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgaga                                                                                  <  1:5898583‑M1/101‑20 (MQ=255)
                    aTTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagag                                                                                 >  1:10037516‑M1/1‑81 (MQ=255)
                     ttACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagaga                                                                                <  1:1983293‑M1/101‑22 (MQ=255)
                      tACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagat                                                                               >  1:10743541‑M1/1‑79 (MQ=255)
                      tACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagat                                                                               >  1:1543892‑M1/1‑79 (MQ=255)
                        cAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatga                                                                             >  1:1220250‑M1/1‑77 (MQ=255)
                         aGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgac                                                                            >  1:3047134‑M1/1‑76 (MQ=255)
                             aTCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgaccttt                                                                        >  1:5073014‑M1/1‑72 (MQ=255)
                             aTCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgaccttt                                                                        >  1:8322707‑M1/1‑72 (MQ=255)
                               cccTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgc                                                                      <  1:6165221‑M1/101‑32 (MQ=255)
                                 cTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaa                                                                    <  1:967781‑M1/101‑34 (MQ=255)
                                 cTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaa                                                                    <  1:6745599‑M1/101‑34 (MQ=255)
                                  tgtgAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaa                                                                   >  1:4114151‑M1/1‑67 (MQ=255)
                                      aaTATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggc                                                               <  1:9230906‑M1/101‑39 (MQ=255)
                                      aaTATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggc                                                               <  1:11158020‑M1/101‑39 (MQ=255)
                                       atatTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggca                                                              >  1:11579699‑M1/1‑62 (MQ=255)
                                       atatTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggca                                                              <  1:5877793‑M1/101‑40 (MQ=255)
                                        tatTACATCTGCTATACCGATTAATTCTCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaa                                                             <  1:5349641‑M1/101‑41 (MQ=255)
                                        tatTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaa                                                             >  1:8499450‑M1/1‑61 (MQ=255)
                                         atTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaa                                                            >  1:7438533‑M1/1‑60 (MQ=255)
                                         atTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaa                                                            <  1:6106054‑M1/101‑42 (MQ=255)
                                           tACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaat                                                          <  1:8607774‑M1/101‑44 (MQ=255)
                                            aCATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaatt                                                         <  1:1511215‑M1/101‑45 (MQ=255)
                                             cATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaatta                                                        >  1:9057104‑M1/1‑56 (MQ=255)
                                             cATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaatta                                                        <  1:553228‑M1/101‑46 (MQ=255)
                                              aTCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaa                                                       <  1:479519‑M1/101‑47 (MQ=255)
                                               tCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaag                                                      >  1:3714879‑M1/1‑54 (MQ=255)
                                               tCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaag                                                      <  1:1750018‑M1/101‑48 (MQ=255)
                                               tCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaag                                                      >  1:6604816‑M1/1‑54 (MQ=255)
                                                cTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaaga                                                     >  1:4390500‑M1/1‑53 (MQ=255)
                                                 tGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagat                                                    >  1:9901745‑M1/1‑52 (MQ=255)
                                                  gCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagata                                                   >  1:6253092‑M1/1‑51 (MQ=255)
                                                  gCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagata                                                   >  1:7670142‑M1/1‑51 (MQ=255)
                                                   cTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatat                                                  >  1:9163056‑M1/1‑50 (MQ=255)
                                                      taCCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagc                                               <  1:1045155‑M1/101‑55 (MQ=255)
                                                       aCCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagca                                              >  1:4057438‑M1/1‑46 (MQ=255)
                                                        ccGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaa                                             >  1:2886725‑M1/1‑45 (MQ=255)
                                                          gATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaac                                           >  1:1797699‑M1/1‑43 (MQ=255)
                                                           aTTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaaca                                          <  1:6071727‑M1/101‑60 (MQ=255)
                                                           aTTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaaca                                          >  1:7628037‑M1/1‑42 (MQ=255)
                                                            ttAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaa                                         >  1:6558773‑M1/1‑41 (MQ=255)
                                                             tAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaa                                        >  1:8420660‑M1/1‑40 (MQ=255)
                                                               aTTCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaata                                      >  1:6461886‑M1/1‑38 (MQ=255)
                                                                 tCGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaataga                                    <  1:7138221‑M1/101‑66 (MQ=255)
                                                                  cGCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagat                                   <  1:6381754‑M1/101‑67 (MQ=255)
                                                                   gCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatc                                  <  1:10470419‑M1/101‑68 (MQ=255)
                                                                   gCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatc                                  <  1:3796132‑M1/101‑68 (MQ=255)
                                                                   gCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatc                                  >  1:5618072‑M1/1‑34 (MQ=255)
                                                                   gCCAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatc                                  >  1:1439868‑M1/1‑34 (MQ=255)
                                                                    ccAGATATATATGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatca                                 >  1:213859‑M1/1‑33 (MQ=255)
                                                                         tatatatGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatggcctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattg                            <  1:3203777‑M1/101‑74 (MQ=255)
                                                                         tatatatGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattg                            <  1:8672675‑M1/101‑74 (MQ=255)
                                                                         tatatatGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattg                            >  1:2763989‑M1/1‑28 (MQ=255)
                                                                           tatatGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaa                          >  1:10896271‑M1/1‑26 (MQ=255)
                                                                            atatGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaat                         <  1:9035571‑M1/101‑77 (MQ=255)
                                                                             tatGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatc                        <  1:6318035‑M1/101‑78 (MQ=255)
                                                                              atGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatct                       <  1:9766993‑M1/101‑79 (MQ=255)
                                                                              atGCAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatct                       <  1:7893170‑M1/101‑79 (MQ=255)
                                                                                 cAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaat                    <  1:2549550‑M1/101‑82 (MQ=255)
                                                                                 cAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaat                    >  1:8831349‑M1/1‑20 (MQ=255)
                                                                                 cAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaat                    >  1:2322208‑M1/1‑20 (MQ=255)
                                                                                 cAAGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaat                    >  1:8043213‑M1/1‑20 (MQ=255)
                                                                                  aaGCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatc                   <  1:11351109‑M1/101‑83 (MQ=255)
                                                                                    gCACCATCATTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcgg                 >  1:7348209‑M1/1‑17 (MQ=255)
                                                                                        catcatTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttg             <  1:11628291‑M1/101‑89 (MQ=255)
                                                                                         atcatTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttgg            >  1:4693128‑M1/1‑12 (MQ=255)
                                                                                         atcatTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttgg            <  1:6973477‑M1/101‑90 (MQ=255)
                                                                                           catTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttggct          <  1:3145890‑M1/101‑92 (MQ=255)
                                                                                            atTTACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttggctc         <  1:7745907‑M1/101‑93 (MQ=255)
                                                                                             tttACTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttggctct        <  1:10629239‑M1/101‑94 (MQ=255)
                                                                                                 cTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttggctctggtg    >  1:456579‑M1/1‑4 (MQ=255)
                                                                                                 cTAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttggctctggtg    >  1:6832026‑M1/1‑4 (MQ=255)
                                                                                                  tAAaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttggctctggtga   >  1:11004662‑M1/1‑3 (MQ=255)
                                                                                                   aaaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttggctctggtgat  <  1:2254278‑M1/101‑100 (MQ=255)
                                                                                                   aaaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttggctctggtgat  <  1:2031122‑M1/101‑100 (MQ=255)
                                                                                                   aaaacaagtaaataaacgagagatgacctttgcaaaaggcaaaattaagatatagcaaacaaatagatcacattgaatctaatcggtttggctctggtgat  >  1:5803981‑M1/1‑2 (MQ=255)
                                                                                                    |                                                                                                   
ATAATCCTTCATTTATTTTAATTACAGTGATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG  >  NC_007779/3750490‑3750689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.