Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 1,496,775 Δ1 bp 100% coding (11/924 nt) ydcI ← DNA‑binding transcriptional regulator

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077791,496,7750T→.100.0% 1192.6 240coding (11/924 nt)ydcIDNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand):  new base (120/118):  ref base (1/0):  total (121/119)

Only 100 of 265 total aligned reads displayed.

CAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTAACAATTA  >  NC_007779/1496675‑1496871
                                                                                                    |                                                                                                
cAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAt                                                                                                  >  1:8756295/1‑101 (MQ=255)
 aaaTTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGGGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAtt                                                                                                 >  1:4260095/1‑101 (MQ=255)
   aTTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAtttt                                                                                               <  1:6246233/101‑1 (MQ=255)
   aTTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAtttt                                                                                               >  1:9087559/1‑101 (MQ=255)
    ttAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAttttt                                                                                              <  1:9347062/101‑1 (MQ=255)
    ttAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAttttt                                                                                              <  1:1533920/101‑1 (MQ=255)
     tAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAtttttt                                                                                             <  1:1996731/101‑1 (MQ=255)
     tAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAtttttt                                                                                             >  1:6852502/1‑101 (MQ=255)
      aaGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAttttttc                                                                                            <  1:8564787/101‑2 (MQ=255)
      aaGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAttttttc                                                                                            >  1:5843109/1‑100 (MQ=255)
       aGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAttttttcc                                                                                           <  1:5709667/101‑3 (MQ=255)
         ggTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAttttttccat                                                                                         >  1:7138640/1‑97 (MQ=255)
          gTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATa                                                                                       <  1:5221320/101‑1 (MQ=255)
           tttCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATaa                                                                                      <  1:7190266/101‑1 (MQ=255)
            ttCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAg                                                                                     <  1:11041145/101‑1 (MQ=255)
            ttCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAg                                                                                     >  1:10198440/1‑101 (MQ=255)
            ttCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAg                                                                                     >  1:10642213/1‑101 (MQ=255)
              cAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACAAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCg                                                                                   >  1:8089588/1‑101 (MQ=255)
               aGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGa                                                                                  >  1:2338169/1‑101 (MQ=255)
                gCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGAt                                                                                 <  1:814732/101‑1 (MQ=255)
                gCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGAt                                                                                 <  1:6176370/101‑1 (MQ=255)
                gCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGAt                                                                                 <  1:2400180/101‑1 (MQ=255)
                gCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGAt                                                                                 >  1:437804/1‑101 (MQ=255)
                  cgcgcgCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGt                                                                               >  1:6676835/1‑101 (MQ=255)
                   gcgcgcCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGtt                                                                              >  1:7082768/1‑101 (MQ=255)
                    cgcgcCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTa                                                                             <  1:10231318/101‑1 (MQ=255)
                    cgcgcCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTa                                                                             <  1:1689648/101‑1 (MQ=255)
                        ccccAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTaaaaa                                                                         <  1:11511150/101‑1 (MQ=255)
                         cccAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAAc                                                                        >  1:5544338/1‑101 (MQ=255)
                          ccAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACg                                                                       >  1:6208832/1‑101 (MQ=255)
                             aaGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAg                                                                    <  1:116918/101‑1 (MQ=255)
                             aaGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAg                                                                    <  1:9211068/101‑1 (MQ=255)
                               gTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCg                                                                  <  1:392386/101‑1 (MQ=255)
                                  ccTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGgtg                                                               <  1:1267131/101‑1 (MQ=255)
                                  ccTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGgtg                                                               <  1:3336907/101‑1 (MQ=255)
                                  ccTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGgtg                                                               >  1:6372855/1‑101 (MQ=255)
                                   cTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGgtgt                                                              >  1:6589749/1‑101 (MQ=255)
                                       ttgtGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCt                                                          <  1:10801728/101‑1 (MQ=255)
                                        tgtgCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTg                                                         <  1:3569035/101‑1 (MQ=255)
                                         gtgCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGa                                                        >  1:1936821/1‑101 (MQ=255)
                                         gtgCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGa                                                        >  1:7600442/1‑101 (MQ=255)
                                         gtgCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGa                                                        <  1:11224655/101‑1 (MQ=255)
                                          tgCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGAc                                                       >  1:4419279/1‑101 (MQ=255)
                                           gCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACa                                                      >  1:2483097/1‑101 (MQ=255)
                                           gCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACa                                                      <  1:4877674/101‑1 (MQ=255)
                                            cGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACaa                                                     <  1:3606657/101‑1 (MQ=255)
                                            cGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACaa                                                     >  1:4501563/1‑101 (MQ=255)
                                             gACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGCCGCTGACAAg                                                    >  1:571847/1‑101 (MQ=255)
                                                aGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGa                                                 >  1:9926986/1‑101 (MQ=255)
                                                 gCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGaa                                                <  1:1143263/101‑1 (MQ=255)
                                                   tACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAgt                                              <  1:5443551/101‑1 (MQ=255)
                                                    aCGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAgtt                                             <  1:9843033/101‑1 (MQ=255)
                                                     cGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAgttg                                            >  1:6500729/1‑101 (MQ=255)
                                                      gAATGTGTGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAgttgt                                           >  1:11562950/1‑101 (MQ=255)
                                                      gAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAgttgt                                           >  1:9616168/1‑101 (MQ=255)
                                                       aaTGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAgttgtt                                          <  1:2158604/101‑1 (MQ=255)
                                                         tGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTg                                        <  1:4778927/101‑1 (MQ=255)
                                                         tGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTg                                        >  1:10065926/1‑101 (MQ=255)
                                                          gTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGa                                       <  1:8715601/101‑1 (MQ=255)
                                                           tATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGAt                                      <  1:2802679/101‑1 (MQ=255)
                                                            aTGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGAtt                                     <  1:9014705/101‑1 (MQ=255)
                                                              gAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTAt                                   <  1:4040253/101‑1 (MQ=255)
                                                                aGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGa                                 >  1:460134/1‑101 (MQ=255)
                                                                aGGGGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTTCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGGGAAGTTGTTTGATTATGa                                 >  1:6116189/1‑101 (MQ=255)
                                                                 ggTGGCGCATACGGATGCGCTGACTAAACAGTCTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGAt                                <  1:1055379/101‑1 (MQ=255)
                                                                     gcgcAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACt                            <  1:11157210/101‑1 (MQ=255)
                                                                     gcgcAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACt                            <  1:4831793/101‑1 (MQ=255)
                                                                       gcAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTg                          >  1:8645004/1‑101 (MQ=255)
                                                                       gcAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTg                          >  1:2608167/1‑101 (MQ=255)
                                                                       gcAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTg                          >  1:10732287/1‑101 (MQ=255)
                                                                       gcAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTg                          >  1:5012090/1‑101 (MQ=255)
                                                                         aaaCGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGAt                        <  1:6350385/101‑1 (MQ=255)
                                                                         aaaCGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGAt                        >  1:6469265/1‑101 (MQ=255)
                                                                         aaaCGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGAt                        >  1:5047561/1‑101 (MQ=255)
                                                                          aaCGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGAtt                       <  1:1790270/101‑1 (MQ=255)
                                                                          aaCGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGAtt                       >  1:8196352/1‑101 (MQ=255)
                                                                           aCGGATACGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTg                      >  1:10915684/1‑101 (MQ=255)
                                                                             ggATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCa                    >  1:4627119/1‑101 (MQ=255)
                                                                              gATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCaa                   >  1:5644882/1‑101 (MQ=255)
                                                                              gATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCaa                   >  1:8884499/1‑101 (MQ=255)
                                                                               aTGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCaaa                  >  1:10061377/1‑101 (MQ=255)
                                                                                tGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCaaaa                 <  1:3051996/101‑1 (MQ=255)
                                                                                tGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCaaaa                 <  1:2236582/101‑1 (MQ=255)
                                                                                tGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCaaaa                 >  1:7688880/1‑101 (MQ=255)
                                                                                   gcTGACTAAACAGACTATTTTTTCCATAAGCGATGTTGAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAatat              >  1:3013968/1‑101 (MQ=255)
                                                                                   gcTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAatat              >  1:5776921/1‑101 (MQ=255)
                                                                                   gcTGACTAAACAGACTATTTTTTCCACAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAatat              >  1:11651425/1‑101 (MQ=255)
                                                                                    cTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAAtatt             >  1:10395511/1‑101 (MQ=255)
                                                                                     tGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAAtatta            <  1:9718292/101‑1 (MQ=255)
                                                                                      gACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAAtattat           >  1:9446277/1‑101 (MQ=255)
                                                                                      gACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAAtattat           >  1:11074953/1‑101 (MQ=255)
                                                                                       aCTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATattatt          >  1:7485791/1‑101 (MQ=255)
                                                                                        cTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATAttatta         <  1:10523386/101‑1 (MQ=255)
                                                                                         tAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTaa        <  1:11675638/101‑1 (MQ=255)
                                                                                         tAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTaa        <  1:5973288/101‑1 (MQ=255)
                                                                                          aaaCAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTAAc       >  1:1601783/1‑101 (MQ=255)
                                                                                          aaaCAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTAAc       >  1:8413340/1‑101 (MQ=255)
                                                                                          aaaCAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTAAc       >  1:5516805/1‑101 (MQ=255)
                                                                                           aaCAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTAACa      >  1:1201121/1‑101 (MQ=255)
                                                                                              aGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATACCTTGATTGCAAAATATTATTAACAAtt   <  1:11016683/101‑1 (MQ=255)
                                                                                                    |                                                                                                
CAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTAACAATTA  >  NC_007779/1496675‑1496871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.