New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 16727800 (0.000)317 (0.870) 140/180 NT 100% intergenic (+114/‑310) ynfM/asr transporter/acid shock‑inducible periplasmic protein
?NC_007779 1980209 = NA (NA)intergenic (‑289/+146) flhD/insH DNA‑binding transcriptional dual regulator/IS5 element protein

Only 100 of 334 total aligned reads displayed.

CGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTCCCGTAAATGCCTTGAA  >  NC_007779/1980109‑1980304
                                                                                                     |                                                                                                 
cGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaag                                                                                                   >  1:8146894/1‑101 (MQ=255)
  aCGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaagga                                                                                                 >  1:9264697/1‑101 (MQ=255)
   cGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaaggaa                                                                                                >  1:5445229/1‑101 (MQ=255)
   cGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaaggaa                                                                                                >  1:14495448/1‑101 (MQ=255)
   cGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaaggaa                                                                                                <  1:3740024/101‑1 (MQ=255)
    gCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaaggaag                                                                                               <  1:2370152/101‑1 (MQ=255)
    gCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaaggaag                                                                                               <  1:8644679/101‑1 (MQ=255)
    gCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaaggaag                                                                                               >  1:16095650/1‑101 (MQ=255)
    gCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaaggaag                                                                                               <  1:3608709/101‑1 (MQ=255)
      aaCTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCATTTACTTAAGGAAGGt                                                                                             >  1:10617497/1‑101 (MQ=255)
      aaCTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGt                                                                                             <  1:13735621/101‑1 (MQ=255)
       aCTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTg                                                                                            >  1:4165419/1‑101 (MQ=255)
        cTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGc                                                                                           <  1:323970/101‑1 (MQ=255)
        cTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGc                                                                                           <  1:17123311/101‑1 (MQ=255)
        cTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGc                                                                                           >  1:7227538/1‑101 (MQ=255)
        cTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGc                                                                                           >  1:5905897/1‑101 (MQ=255)
        cTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGc                                                                                           <  1:6642496/101‑1 (MQ=255)
        cTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATGACTTAAGGAAGGTGc                                                                                           >  1:12523272/1‑101 (MQ=255)
         tGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCg                                                                                          >  1:2966622/1‑101 (MQ=255)
         tGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCg                                                                                          >  1:17825712/1‑101 (MQ=255)
         tGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCg                                                                                          <  1:12073867/101‑1 (MQ=255)
          gTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGa                                                                                         >  1:6171120/1‑101 (MQ=255)
          gTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGa                                                                                         >  1:7092756/1‑101 (MQ=255)
            aCTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAAt                                                                                       >  1:8930086/1‑101 (MQ=255)
            aCTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAAt                                                                                       >  1:15863298/1‑101 (MQ=255)
            aCTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAAt                                                                                       <  1:14861167/101‑1 (MQ=255)
             cTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATa                                                                                      >  1:10521337/1‑101 (MQ=255)
              tCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATaa                                                                                     <  1:7721726/101‑1 (MQ=255)
              tCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATaa                                                                                     <  1:5043965/101‑1 (MQ=255)
               cGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGAGTGATGCAGATCGCACAAAAAACTCAATTACTTAAGGAAGGGGCGAATAAg                                                                                    >  1:6348701/1‑101 (MQ=255)
                  cACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACATAAAACACTCAATTAGTTAAGGAAGGTGCGAATAAGCgg                                                                                 >  1:16769884/1‑101 (MQ=255)
                  cACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCgg                                                                                 <  1:1480224/101‑1 (MQ=255)
                   aCTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCggg                                                                                <  1:1528255/101‑1 (MQ=255)
                    cTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCgggg                                                                               <  1:10341169/101‑1 (MQ=255)
                      acacGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGaa                                                                             >  1:17196724/1‑101 (MQ=255)
                       cacGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGaaa                                                                            <  1:4847126/101‑1 (MQ=255)
                       cacGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGaaa                                                                            <  1:18096545/101‑1 (MQ=255)
                        acGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAAt                                                                           <  1:18271258/101‑1 (MQ=255)
                          gCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAAttc                                                                         >  1:4351763/1‑101 (MQ=255)
                           cacaTACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAAttct                                                                        <  1:949392/101‑1 (MQ=255)
                               tACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTtctc                                                                    <  1:18411574/101‑1 (MQ=255)
                               tACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTtctc                                                                    >  1:12658617/1‑101 (MQ=255)
                               tACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTtctc                                                                    <  1:1359364/101‑1 (MQ=255)
                                aCAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑g                                                                  >  1:8374903/1‑101 (MQ=255)
                                aCAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑g                                                                  >  1:11860867/1‑101 (MQ=255)
                                aCAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑g                                                                  <  1:8349045/101‑1 (MQ=255)
                                 cAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑gg                                                                 >  1:10238553/1‑101 (MQ=255)
                                  aaCGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGc                                                                >  1:10019166/1‑101 (MQ=255)
                                   aCGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATAACTTAAGGAAGGTGGGAATAAGCGGGGAAATCTTTTTC‑GGCt                                                               >  1:6893385/1‑101 (MQ=38)
                                    cGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTg                                                              <  1:7795206/101‑1 (MQ=255)
                                      gAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATACTTCTC‑GGCTGAc                                                            >  1:12875663/1‑101 (MQ=255)
                                       aGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGTCt                                                           <  1:10976317/101‑1 (MQ=255)
                                       aGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACt                                                           >  1:15980349/1‑101 (MQ=255)
                                          ggggCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAg                                                        >  1:14233486/1‑101 (MQ=255)
                                           ggggcgggtttttCAAATAATGCGTGAGGGGGAACACACAAAACACTCAATGACTAAAGGAAGTTGAGAAAAGGGGGGGAAATTCTTCTC‑GGCTGACTCAg                                                        <  1:987848/92‑1 (MQ=16)
                                           gggCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGt                                                       >  1:11426415/1‑101 (MQ=255)
                                             gcggggATTTTC‑AATAATGCGTGAGGGGGATAACACAAAACAAACAATGAGTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGtca                                                     <  1:1941593/96‑1 (MQ=17)
                                              cTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGtcat                                                    >  1:7574649/1‑101 (MQ=255)
                                               tGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGtcatt                                                   >  1:16461503/1‑101 (MQ=255)
                                               tGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGtcatt                                                   >  1:17562629/1‑101 (MQ=255)
                                                  gATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGtcatttca                                                >  1:18177815/1‑101 (MQ=255)
                                                   aTTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGtcatttcat                                               >  1:1390848/1‑101 (MQ=255)
                                                    ttttC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGtcatttcatt                                              >  1:12008590/1‑101 (MQ=255)
                                                    ttttC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGtcatttcatt                                              >  1:3420540/1‑101 (MQ=255)
                                                     tttC‑AATAATGCGTGATGCAGATCACACAAAACACTCGATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTcatttcattt                                             >  1:9699589/1‑101 (MQ=255)
                                                     tttC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTcatttcattt                                             >  1:5213016/1‑101 (MQ=255)
                                                      ttC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCatttcatttc                                            >  1:11301629/1‑101 (MQ=255)
                                                       tC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATttct                                           >  1:2830989/1‑101 (MQ=255)
                                                        c‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATttctt                                          <  1:3476271/101‑1 (MQ=255)
                                                          aataatGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATttcttc                                         >  1:12358117/1‑101 (MQ=255)
                                                                 cGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTg                                  >  1:5672292/1‑101 (MQ=255)
                                                                   tGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAg                                >  1:8215341/1‑101 (MQ=255)
                                                                   tGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAg                                >  1:7401085/1‑101 (MQ=255)
                                                                     aTGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGcc                              >  1:266796/1‑101 (MQ=255)
                                                                     aTGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGcc                              >  1:3817092/1‑101 (MQ=255)
                                                                     aTGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGcc                              <  1:5304357/101‑1 (MQ=255)
                                                                      tGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCg                             >  1:2200117/1‑101 (MQ=255)
                                                                       gCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGa                            >  1:651737/1‑101 (MQ=255)
                                                                          gATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑ttt                        >  1:12749269/1‑101 (MQ=255)
                                                                           aTCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑tttt                       >  1:11679541/1‑101 (MQ=255)
                                                                             cacacaAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑tttttt                     >  1:16378554/1‑101 (MQ=255)
                                                                                acaAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTtctc                  >  1:17611447/1‑101 (MQ=255)
                                                                                 caAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTcc                 >  1:7515003/1‑101 (MQ=255)
                                                                                 caAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTcc                 >  1:12182692/1‑101 (MQ=255)
                                                                                  aaaaCACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGGTTGAGCCGA‑TTTTTTCTccc                >  1:13385834/1‑101 (MQ=255)
                                                                                   aaaCACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTCCCg               >  1:14736704/1‑101 (MQ=255)
                                                                                      cacTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTCCCGTaa            >  1:6063127/1‑101 (MQ=40)
                                                                                        cTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTCCCGTAAAt          >  1:16603066/1‑101 (MQ=39)
                                                                                        cTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTCCCGTAAAt          >  1:15404988/1‑101 (MQ=39)
                                                                                         tCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTTCTCCCGTAAAt          >  1:1557996/1‑101 (MQ=255)
                                                                                          cAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTCCCGTAAATGc        >  1:8041901/1‑101 (MQ=37)
                                                                                          cAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTCCCGTAAATGc        >  1:15136702/1‑101 (MQ=37)
                                                                                          cAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTCCCGTAAATGc        >  1:17042459/1‑101 (MQ=37)
                                                                                          aaaTTAATTAAGGAAGGGTGAAATAAGGGGGGAAATTTTTCTCGGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTCCCGTAAATg         <  1:13849554/100‑1 (MQ=11)
                                                                                            aTTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTCCCGTAAATGCCt      >  1:4502004/1‑101 (MQ=34)
                                                                                            aTTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTCCCGTAAATGCCt      >  1:16885638/1‑101 (MQ=34)
                                                                                              tACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTCCCGTAAATGCCTTg    >  1:8277538/1‑101 (MQ=32)
                                                                                              tACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTCCCGTAAATGCCTTg    >  1:15006111/1‑101 (MQ=32)
                                                                                               aCTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTCCCGTAAATGCCTTGa   >  1:13058346/1‑101 (MQ=31)
                                                                                               aCTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTCCCGTAAATGCCTTGa   >  1:2023454/1‑101 (MQ=31)
                                                                                                     |                                                                                                 
CGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTC‑AATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTC‑GGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA‑TTTTTTCTCCCGTAAATGCCTTGAA  >  NC_007779/1980109‑1980304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.