BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 1907288	19 (0.050)	339 (0.930)	148/180	NT	94.7%	intergenic (+315/‑114)	yobD/yebN	inner membrane protein/inner membrane protein
*	?	NC_007779	2411458 =	NA (NA)	339 (0.930)	148/180	NT	94.7%	intergenic (‑147/+15)	lrhA/insB	DNA‑binding transcriptional repressor/IS1 element protein

Only 100 of 420 total aligned reads displayed.

CACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCG  >  NC_007779/2411358‑2411556

cacacacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCg                                                                                                    >  1:17822715/1‑101 (MQ=255)

cacacacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCg                                                                                                    >  1:8602133/1‑101 (MQ=255)

cacacacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCg                                                                                                    <  1:3060992/101‑1 (MQ=255)

  cacacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGt                                                                                                  <  1:9239938/101‑1 (MQ=255)

  cacacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGt                                                                                                  <  1:8054660/101‑1 (MQ=255)

     acaaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAAt                                                                                               <  1:7426614/101‑1 (MQ=255)

       aaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATTCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGa                                                                                             >  1:12808353/1‑101 (MQ=255)

       aaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGa                                                                                             >  1:13971682/1‑101 (MQ=255)

       aaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGa                                                                                             <  1:407668/101‑1 (MQ=255)

       aaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGa                                                                                             >  1:9782195/1‑101 (MQ=255)

        aacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGAc                                                                                            >  1:16170867/1‑101 (MQ=255)

         acaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACt                                                                                           <  1:15800175/101‑1 (MQ=255)

            aGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCa                                                                                        <  1:4904630/101‑1 (MQ=255)

            aGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCa                                                                                        >  1:15551526/1‑101 (MQ=255)

              cAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAAc                                                                                      <  1:643426/101‑1 (MQ=255)

               aaTTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACt                                                                                     >  1:11985988/1‑101 (MQ=255)

                aTTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACtt                                                                                    >  1:7127311/1‑101 (MQ=255)

                aTTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACtt                                                                                    <  1:4693825/101‑1 (MQ=255)

                 ttCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTa                                                                                   <  1:15929656/101‑1 (MQ=255)

                  tCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTAt                                                                                  >  1:5104103/1‑101 (MQ=255)

                  tCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTAt                                                                                  >  1:11833134/1‑101 (MQ=255)

                   ccATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTAtt                                                                                 <  1:10943687/101‑1 (MQ=255)

                    cATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTg                                                                                <  1:5677045/101‑1 (MQ=255)

                    cATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTg                                                                                >  1:13190315/1‑101 (MQ=255)

                     aTTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGa                                                                               >  1:18547312/1‑101 (MQ=255)

                     aTTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGa                                                                               >  1:9426128/1‑101 (MQ=255)

                     aTTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGAAATGACTCCAACTTATTGa                                                                               >  1:1224957/1‑101 (MQ=255)

                         gTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAgt                                                                           <  1:11574179/101‑1 (MQ=255)

                         gTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAgt                                                                           >  1:320929/1‑101 (MQ=255)

                           aaTGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAgtgt                                                                         >  1:130612/1‑101 (MQ=255)

                           aaTGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAgtgt                                                                         <  1:8253256/101‑1 (MQ=255)

                           aaTGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAgtgt                                                                         >  1:12500016/1‑101 (MQ=255)

                           aaTGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAgtgt                                                                         >  1:5995731/1‑101 (MQ=255)

                            aTGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTTATAGTGtt                                                                        >  1:2034112/1‑101 (MQ=255)

                                 ccTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATg                                                                   <  1:8143921/101‑1 (MQ=255)

                                  cTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGt                                                                  >  1:14582246/1‑101 (MQ=255)

                                  cTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGt                                                                  >  1:12563137/1‑101 (MQ=255)

                                   tCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGtc                                                                 >  1:5461258/1‑100 (MQ=255)

                                     ccTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCa                                                               >  1:516678/1‑101 (MQ=255)

                                     ccTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCa                                                               >  1:16589177/1‑101 (MQ=255)

                                     ccTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCa                                                               >  1:5004546/1‑101 (MQ=255)

                                     ccTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCa                                                               <  1:15151640/101‑1 (MQ=255)

                                     ccTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCa                                                               >  1:949416/1‑101 (MQ=255)

                                      cTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAg                                                              <  1:65839/101‑1 (MQ=255)

                                       tGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGa                                                             >  1:3938402/1‑101 (MQ=255)

                                        ggCAGTTTCATCCGGAACCCGGACAAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGAt                                                            <  1:2561045/101‑1 (MQ=255)

                                          cAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATaa                                                          <  1:9145304/101‑1 (MQ=255)

                                           aGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAt                                                         <  1:1687808/101‑1 (MQ=255)

                                           aGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAt                                                         <  1:8381479/101‑1 (MQ=255)

                                            gTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATg                                                        >  1:14095148/1‑101 (MQ=255)

                                            gTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATg                                                        <  1:476161/101‑1 (MQ=255)

                                             tttCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGc                                                       <  1:4453076/101‑1 (MQ=255)

                                               tCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGccc                                                     <  1:10781096/101‑1 (MQ=255)

                                                   ccGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATg                                                 <  1:18291231/101‑1 (MQ=255)

                                                   ccGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATg                                                 >  1:9069187/1‑101 (MQ=255)

                                                   ccGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAAATTATTGATAGGGTTTTATGTTCAGATAATGCCCGATg                                                 >  1:4520631/1‑101 (MQ=255)

                                                      gAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACt                                              <  1:14670918/101‑1 (MQ=255)

                                                      gAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACt                                              >  1:17440724/1‑101 (MQ=255)

                                                       aaCCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACtt                                             >  1:11727320/1‑101 (MQ=255)

                                                       aaCCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACtt                                             >  1:12351769/1‑101 (MQ=255)

                                                         cccGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTg                                           >  1:15322860/1‑101 (MQ=255)

                                                          ccGGACGAATGTAAAAATGCATACGAGTTGCACTAAAATAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGt                                          <  1:16770946/101‑1 (MQ=255)

                                                          ccGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGt                                          >  1:18225744/1‑101 (MQ=255)

                                                          ccGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGt                                          <  1:17914126/101‑1 (MQ=255)

                                                           cGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTc                                         >  1:7607728/1‑101 (MQ=255)

                                                            ggACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCa                                        >  1:11224330/1‑101 (MQ=255)

                                                              aCGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATg                                      >  1:10024190/1‑101 (MQ=255)

                                                              aCGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATg                                      >  1:13793145/1‑101 (MQ=255)

                                                              aCGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATg                                      >  1:16444338/1‑101 (MQ=255)

                                                               cGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGc                                     <  1:9892020/101‑1 (MQ=255)

                                                               cGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGc                                     >  1:10190424/1‑101 (MQ=255)

                                                               cGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGc                                     <  1:11071519/101‑1 (MQ=255)

                                                               cGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGc                                     >  1:10624294/1‑101 (MQ=255)

                                                                gAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCa                                    <  1:10362438/101‑1 (MQ=255)

                                                                 aaaGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAg                                   >  1:14219452/1‑101 (MQ=255)

                                                                  aaGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGc                                  >  1:5270348/1‑101 (MQ=255)

                                                                     tAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTcc                               >  1:8780397/1‑101 (MQ=255)

                                                                      aaaaaTGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCa                              >  1:12972233/1‑101 (MQ=255)

                                                                       aaaaTGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCAc                             >  1:12421570/1‑101 (MQ=255)

                                                                       aaaaTGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCAc                             >  1:10542503/1‑101 (MQ=255)

                                                                       aaaaTGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCAc                             >  1:2743572/1‑101 (MQ=255)

                                                                         aaTGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCg                           <  1:6192625/101‑1 (MQ=255)

                                                                          aTGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGa                          >  1:12106026/1‑101 (MQ=255)

                                                                            gCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGAtt                        >  1:17056077/1‑101 (MQ=255)

                                                                            gCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGAtt                        <  1:7802357/101‑1 (MQ=255)

                                                                            gCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGAtt                        <  1:3705838/101‑1 (MQ=255)

                                                                                atGAGTTGCACTAAAAAAGCGGTAATGACTCTAACTTATTGATAGTTTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTga                    <  1:16532394/101‑1 (MQ=255)

                                                                                 tGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTgag                   >  1:14979330/1‑101 (MQ=255)

                                                                                 tGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTgag                   >  1:15591026/1‑101 (MQ=255)

                                                                                   aGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGaa                 >  1:6907613/1‑101 (MQ=255)

                                                                                    gTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAAc                <  1:12665787/101‑1 (MQ=255)

                                                                                    attGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAAc                <  1:7465003/100‑1 (MQ=255)

                                                                                     ttGCACTAAAAAAGCGGTAATGACTCCGACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACg               >  1:17771750/1‑101 (MQ=255)

                                                                                     ttGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACg               >  1:14431008/1‑101 (MQ=255)

                                                                                      tGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGa              >  1:7532982/1‑101 (MQ=255)

                                                                                        cACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACa            <  1:3441641/101‑1 (MQ=40)

                                                                                         aCTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTGCACCGATTTTGAGAACGACAg           >  1:13357344/1‑101 (MQ=255)

                                                                                         aCTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAg           >  1:5930547/1‑101 (MQ=40)

                                                                                           tAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCg         >  1:287680/1‑101 (MQ=38)

                                                                                           tAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCg         >  1:4342625/1‑101 (MQ=38)

CACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACTAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCG  >  NC_007779/2411358‑2411556

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.