| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,124,070 | Δ1 bp | 1.5% | coding (46/1224 nt) | glcF ← | glycolate oxidase iron‑sulfur subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,124,070 | 0 | G→. | 1.5% | 8.8 ‑0.4 ‑1.2 | 337 | coding (46/1224 nt) | glcF | glycolate oxidase iron‑sulfur subunit |
| Reads supporting (aligned to +/- strand): new base (3/2): ref base (156/175): total (159/178) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.70e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.82e-02 | ||||||||||
Only 100 of 417 total aligned reads displayed.
CGCGGCCCGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGG > NC_007779/3123970‑3124170 | cgcgGCCCGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAg > 1:9250809/1‑101 (MQ=255) gcgGCCCGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgc < 1:5747801/101‑1 (MQ=255) gcgGCCCGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgc > 1:5170708/1‑101 (MQ=255) cgGCCCGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcg > 1:5871171/1‑101 (MQ=255) cgGCCCGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcg < 1:2714638/101‑1 (MQ=255) ggCCCGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgc < 1:16658438/101‑1 (MQ=255) ggCCCGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACAAAGGGGCGCAGGATGCTGTCGGCTTCCAgcgc > 1:7078295/1‑101 (MQ=255) gCCCGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcg < 1:14105442/101‑1 (MQ=255) cccGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgc < 1:4424659/101‑1 (MQ=255) cccGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgc < 1:191219/101‑1 (MQ=255) ccGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGGACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgcg > 1:10144451/1‑101 (MQ=255) cGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgcgc < 1:11074278/101‑1 (MQ=255) cGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgcgc < 1:630772/101‑1 (MQ=255) gTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgcgcg > 1:6438414/1‑101 (MQ=255) tCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgcgcgc > 1:17890200/1‑101 (MQ=255) tCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgcgcgc > 1:12746271/1‑101 (MQ=255) ccAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGcgcgcgcgcg < 1:2216647/101‑1 (MQ=255) cAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGt > 1:7132266/1‑101 (MQ=255) cAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGAGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGt > 1:773552/1‑101 (MQ=255) ttCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCt > 1:7578684/1‑101 (MQ=255) ttCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGAGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCt > 1:13154502/1‑101 (MQ=255) tCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCg > 1:12142996/1‑101 (MQ=255) tCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCg < 1:8999999/101‑1 (MQ=255) cGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGc < 1:856554/101‑1 (MQ=255) cccAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCAt < 1:7977695/101‑1 (MQ=255) ccAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCAtc > 1:16026310/1‑101 (MQ=255) ccAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCAtc > 1:14218284/1‑101 (MQ=255) ccAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCAtc < 1:4642728/101‑1 (MQ=255) aaGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCtt < 1:16982341/101‑1 (MQ=255) aGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTc > 1:18321475/1‑101 (MQ=255) aGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTc > 1:12189880/1‑101 (MQ=255) cTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAg < 1:1465404/101‑1 (MQ=255) gATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGtt < 1:2896587/101‑1 (MQ=255) aTAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTa < 1:4278355/101‑1 (MQ=255) aTAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTa > 1:15228141/1‑101 (MQ=255) aTAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTa < 1:14438328/101‑1 (MQ=255) aTAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTa < 1:8355879/101‑1 (MQ=255) gggtGGGCCGGTTTGCGGAAAAAAACCCGGAGTAAACACGGGCGCGAGGGATGCTGCCGGCTCCCGGCGCGCGCGCGTTCTGCCGCATCTCTTAATTTAAt < 1:10869689/98‑1 (MQ=255) gTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTg < 1:1817562/101‑1 (MQ=255) ttGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTgg > 1:5462270/1‑101 (MQ=255) ttGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTgg < 1:12581520/101‑1 (MQ=255) ttGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTgg > 1:18428066/1‑101 (MQ=255) tGGGCAGG‑TTGCGGGACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTggg < 1:8921336/101‑1 (MQ=255) gggCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGt > 1:10317439/1‑101 (MQ=255) ggCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGCTGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGtt > 1:9326223/1‑101 (MQ=255) ggCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGtt > 1:11218589/1‑101 (MQ=255) cAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTg > 1:8043277/1‑101 (MQ=255) aGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCA‑‑GCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCAt < 1:17705026/101‑1 (MQ=255) cGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGcc < 1:963171/101‑1 (MQ=255) gTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTg < 1:15676845/101‑1 (MQ=255) aCAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGct > 1:7406838/1‑101 (MQ=255) cAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGctc > 1:181508/1‑101 (MQ=255) aaaTCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTCGCATAGCCTGctcct > 1:5351695/1‑101 (MQ=255) aTCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCa > 1:4748666/1‑101 (MQ=255) tCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCaa > 1:12865267/1‑101 (MQ=255) cGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAg < 1:15888027/101‑1 (MQ=255) gCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGt > 1:16584963/1‑101 (MQ=255) cAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGtt < 1:11781532/101‑1 (MQ=255) cAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGtt > 1:13549782/1‑101 (MQ=255) cAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGtt > 1:15397068/1‑101 (MQ=255) aGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTc < 1:10026579/101‑1 (MQ=255) gTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTcc < 1:3046191/101‑1 (MQ=255) gAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCGTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCcgc < 1:12499652/101‑1 (MQ=255) aaCACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCcgcg > 1:9801784/1‑101 (MQ=255) acacAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGt > 1:4181945/1‑101 (MQ=255) acaGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTAc > 1:4541157/1‑101 (MQ=255) acaGGAGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTAc > 1:16117477/1‑101 (MQ=255) caGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACa > 1:238730/1‑101 (MQ=255) aGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACAt < 1:16475284/101‑1 (MQ=255) aGGAGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACAt > 1:3767839/1‑101 (MQ=255) ggCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATACCCTGCTCCTCAAAGTTCCGCGTACATg > 1:17387841/1‑101 (MQ=255) gcgcgcAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGc < 1:13770463/101‑1 (MQ=255) gcgcgcAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGc < 1:4925207/101‑1 (MQ=255) gcgcgcAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGc < 1:17577791/101‑1 (MQ=255) gcAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTGAAAGTTCCGCGTACATGCGAcc < 1:13421595/101‑1 (MQ=255) cAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCg > 1:9454980/1‑101 (MQ=255) cAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCg > 1:846575/1‑101 (MQ=255) aGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCgg > 1:13950558/1‑101 (MQ=255) ggATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCggg > 1:6811719/1‑101 (MQ=255) gATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCgggg < 1:10589734/101‑1 (MQ=255) tGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGtt < 1:5612113/101‑1 (MQ=255) tGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGtt < 1:6231455/101‑1 (MQ=255) tGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGtt < 1:2857193/101‑1 (MQ=255) gCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTa < 1:6120141/101‑1 (MQ=255) gCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTa < 1:16329885/101‑1 (MQ=255) tGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTaaa > 1:11534790/1‑101 (MQ=255) cGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAacac > 1:10232396/1‑101 (MQ=255) cGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTGAAacac < 1:11956961/101‑1 (MQ=255) ggCTTCCAGCGCGGGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcg < 1:3899971/101‑1 (MQ=255) gCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCTTACATGCGACCGGGGTTAAACAcgc < 1:3216078/101‑1 (MQ=255) gCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcgc < 1:3509231/101‑1 (MQ=255) cTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcgcc < 1:14914887/101‑1 (MQ=255) ttCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcgccg > 1:11827850/1‑101 (MQ=255) ttCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcgccg > 1:8207736/1‑101 (MQ=255) ttCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcgccg < 1:9187799/101‑1 (MQ=255) tCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcgccgc < 1:2053688/101‑1 (MQ=255) cAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCaa < 1:17263894/101‑1 (MQ=255) cAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCaa > 1:15120092/1‑101 (MQ=255) aGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAg < 1:6942569/101‑1 (MQ=255) gcgcgcgcgcGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAgg > 1:11328601/1‑101 (MQ=255) | CGCGGCCCGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGG > NC_007779/3123970‑3124170 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |