| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,124,071 | Δ1 bp | 1.5% | coding (45/1224 nt) | glcF ← | glycolate oxidase iron‑sulfur subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,124,071 | 0 | C→. | 1.5% | 8.9 ‑0.4 ‑1.2 | 332 | coding (45/1224 nt) | glcF | glycolate oxidase iron‑sulfur subunit |
| Reads supporting (aligned to +/- strand): new base (3/2): ref base (153/174): total (156/176) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.69e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.07e-02 | ||||||||||
Only 100 of 416 total aligned reads displayed.
GCGGCCCGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGG > NC_007779/3123971‑3124171 | gcgGCCCGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgc > 1:5170708/1‑101 (MQ=255) ggCCCGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACAAAGGGGCGCAGGATGCTGTCGGCTTCCAgcgc > 1:7078295/1‑101 (MQ=255) gCCCGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcg < 1:14105442/101‑1 (MQ=255) gCCCGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCACAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcg > 1:5447212/1‑101 (MQ=255) cccGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgc < 1:191219/101‑1 (MQ=255) cccGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgc < 1:16597356/101‑1 (MQ=255) ccggccgggtCAACGCCCAAAAGCTGATGGTTTGGGCAGG‑TTGCGGTACAAAACCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgcg < 1:232600/92‑1 (MQ=255) ccGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGGACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgcg > 1:10144451/1‑101 (MQ=255) ccGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgcg < 1:14593078/101‑1 (MQ=255) cGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgcgc < 1:17731865/101‑1 (MQ=255) cGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgcgc < 1:2538650/101‑1 (MQ=255) cGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgcgc < 1:630772/101‑1 (MQ=255) gTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgcgcg > 1:6438414/1‑101 (MQ=255) tCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgcgcgc > 1:12746271/1‑101 (MQ=255) tCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAgcgcgcgcgc > 1:17890200/1‑101 (MQ=255) ccAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGcgcgcgcgcg < 1:2216647/101‑1 (MQ=255) cAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGAGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGt > 1:773552/1‑101 (MQ=255) gTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTc < 1:17322842/101‑1 (MQ=255) ttCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCt > 1:7578684/1‑101 (MQ=255) tCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTg < 1:4099586/101‑1 (MQ=255) tCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTg < 1:18386197/101‑1 (MQ=255) tCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTg < 1:14303939/101‑1 (MQ=255) tCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCg > 1:12142996/1‑101 (MQ=255) cGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGc < 1:856554/101‑1 (MQ=255) gCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCa > 1:4922680/1‑101 (MQ=255) cccAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCAt > 1:7153554/1‑101 (MQ=255) cccAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCAt < 1:7977695/101‑1 (MQ=255) ccAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCAtc > 1:15926431/1‑101 (MQ=255) ccAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCAtc > 1:3758265/1‑101 (MQ=255) aGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCAtctc < 1:15144445/101‑1 (MQ=255) aGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTc > 1:12189880/1‑101 (MQ=255) cTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAg < 1:5521431/101‑1 (MQ=255) tGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGt > 1:1357994/1‑101 (MQ=255) aTAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTa > 1:15228141/1‑101 (MQ=255) aTAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTa < 1:8355879/101‑1 (MQ=255) aGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAAt < 1:13788602/101‑1 (MQ=255) gggtGGGCCGGTTTGCGGAAAAAAACCCGGAGTAAACACGGGCGCGAGGGATGCTGCCGGCTCCCGGCGCGCGCGCGTTCTGCCGCATCTCTTAATTTAAt < 1:10869689/98‑1 (MQ=255) gTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTg < 1:1817562/101‑1 (MQ=255) ttGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTgg > 1:17207398/1‑101 (MQ=255) ttGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTgg < 1:12581520/101‑1 (MQ=255) gggCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGt < 1:3480722/101‑1 (MQ=255) gggCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGt > 1:10317439/1‑101 (MQ=255) ggCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGCTGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGtt > 1:9326223/1‑101 (MQ=255) ggCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGtt > 1:11218589/1‑101 (MQ=255) cAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTg < 1:16079345/101‑1 (MQ=255) cAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTg > 1:8043277/1‑101 (MQ=255) cGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGcc < 1:963171/101‑1 (MQ=255) cGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCATCAGTTAATTGGGTTTGCATAGcc > 1:5857261/1‑101 (MQ=255) gTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTg < 1:14799126/101‑1 (MQ=255) aCAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGct > 1:7406838/1‑101 (MQ=255) cAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGctc > 1:181508/1‑101 (MQ=255) aaaaTCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGctcc > 1:4428728/1‑101 (MQ=255) aaaTCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTCGCATAGCCTGctcct > 1:5351695/1‑101 (MQ=255) aaTCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGctcctc < 1:11940177/101‑1 (MQ=255) tCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCaa > 1:13460006/1‑101 (MQ=255) tCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCaa > 1:12865267/1‑101 (MQ=255) tCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCaa > 1:4323502/1‑101 (MQ=255) cAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGtt < 1:11781532/101‑1 (MQ=255) cAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGtt > 1:15397068/1‑101 (MQ=255) aGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTc < 1:14050432/101‑1 (MQ=255) aGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTc < 1:10026579/101‑1 (MQ=255) gTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTcc < 1:3046191/101‑1 (MQ=255) tGAACATAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCcg > 1:89623/1‑101 (MQ=255) gAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCGTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCcgc < 1:12499652/101‑1 (MQ=255) aaCACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCcgcg > 1:9801784/1‑101 (MQ=255) acaGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTAc < 1:3889278/101‑1 (MQ=255) acaGGAGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTAc > 1:13240551/1‑101 (MQ=255) aGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACAt < 1:10979228/101‑1 (MQ=255) aGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACAt < 1:16475284/101‑1 (MQ=255) ggCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATACCCTGCTCCTCAAAGTTCCGCGTACATg > 1:17387841/1‑101 (MQ=255) gcgcgcAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGc < 1:17577791/101‑1 (MQ=255) gcAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGAcc < 1:1829214/101‑1 (MQ=255) gcAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTGCCGCGTACATGCGAcc < 1:14915012/101‑1 (MQ=255) cAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCg > 1:9454980/1‑101 (MQ=255) cAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCg > 1:846575/1‑101 (MQ=255) ggATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCggg > 1:6811719/1‑101 (MQ=255) gATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCgggg < 1:10589734/101‑1 (MQ=255) tGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGtt < 1:6231455/101‑1 (MQ=255) tGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGtt < 1:2842918/101‑1 (MQ=255) gCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTa < 1:6120141/101‑1 (MQ=255) gCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTa < 1:16329885/101‑1 (MQ=255) tGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTaaa > 1:11534790/1‑101 (MQ=255) gTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAac < 1:8217466/101‑1 (MQ=255) tCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAaca < 1:16118531/101‑1 (MQ=255) cGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAacac > 1:10232396/1‑101 (MQ=255) ggCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcg > 1:2895729/1‑101 (MQ=255) ggCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcg < 1:15702346/101‑1 (MQ=255) ggCTTCCA‑‑GCGCGCGCGTTCTGCCGCATCTCTTCAGGTAATTTGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcgcc > 1:16826429/1‑101 (MQ=255) gCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCTTACATGCGACCGGGGTTAAACAcgc < 1:3216078/101‑1 (MQ=255) cTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcgcc < 1:4630322/101‑1 (MQ=255) cTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcgcc < 1:8877789/101‑1 (MQ=255) cTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcgcc < 1:9244699/101‑1 (MQ=255) ttCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcgccg < 1:9187799/101‑1 (MQ=255) ttCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcgccg > 1:11827850/1‑101 (MQ=255) ttCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcgccg < 1:468802/101‑1 (MQ=255) tCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACAcgccgc < 1:2053688/101‑1 (MQ=255) ccAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCa < 1:571098/101‑1 (MQ=255) aGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAg < 1:6942569/101‑1 (MQ=255) gcgcgcgcgcGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAgg > 1:11328601/1‑101 (MQ=255) cgcgcgcgcgTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAggg > 1:4527290/1‑101 (MQ=255) | GCGGCCCGTCCAGTTCATCGCCCAGAAGCTGATAGGTTGGGCAGG‑TTGCGGTACAAAATCCGCAGTGAACACAGGCGCGCAGGATGCTGTCGGCTTCCAGCGCGCGCGCGTTCTGCCGCATCTCTTCAGTTAATTGGGTTTGCATAGCCTGCTCCTCAAAGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGG > NC_007779/3123971‑3124171 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |