BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 4310362	0 (0.000)	417 (1.220)	152/172	NT	100%	intergenic (‑286/‑69)	yjcS/insH	alkyl sulfatase/IS5 element protein
*	?	NC_007779	4311562 =	0 (0.000)	417 (1.220)	152/172	NT	100%	coding (916/1029 nt)	alsK	D‑allose kinase

Only 100 of 490 total aligned reads displayed.

TAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG  >  NC_007779/4310262‑4310461

 aataTGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGc                                                                                                    >  1:12814742‑M1/1‑100 (MQ=255)

 aataTGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGc                                                                                                    >  1:4439899‑M1/1‑100 (MQ=255)

  atatGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGATTTAGca                                                                                                   >  1:11908511‑M1/1‑99 (MQ=255)

     tGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacag                                                                                                <  1:15308299‑M1/101‑6 (MQ=255)

     tGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacag                                                                                                <  1:4675282‑M1/101‑6 (MQ=255)

      gAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacaga                                                                                               <  1:8851761‑M1/101‑7 (MQ=255)

        gTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaac                                                                                             >  1:5946169‑M1/1‑93 (MQ=255)

        gTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaac                                                                                             >  1:6985930‑M1/1‑93 (MQ=255)

        gTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaac                                                                                             >  1:11779174‑M1/1‑93 (MQ=255)

         tCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaact                                                                                            >  1:2993687‑M1/1‑92 (MQ=255)

          cGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactg                                                                                           <  1:6603877‑M1/101‑11 (MQ=255)

          cGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactg                                                                                           <  1:1612800‑M1/101‑11 (MQ=255)

           gTTTTATGTGTTTTTTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgt                                                                                          >  1:15806845‑M1/1‑90 (MQ=255)

           gTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgt                                                                                          >  1:15449623‑M1/1‑90 (MQ=255)

           gTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgt                                                                                          >  1:10267455‑M1/1‑90 (MQ=255)

            ttttATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtg                                                                                         >  1:14287376‑M1/1‑89 (MQ=255)

             tttATGTGTTTATTATATATATTGTACCTGTCGTTGGCGCAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtgg                                                                                        <  1:6038793‑M1/101‑14 (MQ=255)

             tttATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtgg                                                                                        >  1:13899407‑M1/1‑88 (MQ=255)

              ttATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggc                                                                                       <  1:11470941‑M1/101‑15 (MQ=255)

               tATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggca                                                                                      >  1:2320273‑M1/1‑86 (MQ=255)

                    ttttaTTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaa                                                                                 <  1:4095008‑M1/100‑21 (MQ=255)

                    gtTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaa                                                                                 <  1:16024000‑M1/101‑21 (MQ=255)

                     tttATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaac                                                                                <  1:1842718‑M1/101‑22 (MQ=255)

                       tattatATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgt                                                                              <  1:8636934‑M1/101‑24 (MQ=255)

                        attatATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATTGGGGCTTTAGcacagaactgtggcaaaaaacgt                                                                              >  1:13538601‑M1/1‑78 (MQ=255)

                        attatATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgtt                                                                             >  1:16964497‑M1/1‑77 (MQ=255)

                        attatATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgtt                                                                             <  1:7164018‑M1/101‑25 (MQ=255)

                        attatATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgtt                                                                             <  1:7805149‑M1/101‑25 (MQ=255)

                          tatatataTTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttga                                                                           <  1:1772461‑M1/101‑27 (MQ=255)

                          tatatataTTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttga                                                                           <  1:4985099‑M1/101‑27 (MQ=255)

                            tatatatTGTACCTGTGGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatg                                                                         <  1:17608380‑M1/101‑29 (MQ=255)

                            tatatatTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatg                                                                         >  1:9538514‑M1/1‑73 (MQ=255)

                            tatatatTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatg                                                                         >  1:6925145‑M1/1‑73 (MQ=255)

                             atatatTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgc                                                                        >  1:6726873‑M1/1‑72 (MQ=255)

                              tatatTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcg                                                                       >  1:10665247‑M1/1‑71 (MQ=255)

                               atatTGTGCCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgc                                                                      <  1:9762588‑M1/101‑32 (MQ=255)

                               atatTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgc                                                                      >  1:13614987‑M1/1‑70 (MQ=255)

                                 atTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgcca                                                                    >  1:8267827‑M1/1‑68 (MQ=255)

                                  ttGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaa                                                                   <  1:3861014‑M1/101‑35 (MQ=255)

                                    gTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaata                                                                 >  1:14078023‑M1/1‑65 (MQ=255)

                                     tACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatat                                                                >  1:8573639‑M1/1‑64 (MQ=255)

                                     tACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatat                                                                >  1:2925729‑M1/1‑64 (MQ=255)

                                     tACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatat                                                                >  1:13088305‑M1/1‑64 (MQ=255)

                                      aCCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatatt                                                               <  1:17951640‑M1/101‑39 (MQ=255)

                                       ccTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattg                                                              <  1:11687138‑M1/101‑40 (MQ=255)

                                       ccTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattg                                                              >  1:2741410‑M1/1‑62 (MQ=255)

                                        cTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgc                                                             <  1:13191478‑M1/101‑41 (MQ=255)

                                         tGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgct                                                            >  1:10472497‑M1/1‑60 (MQ=255)

                                          gTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctg                                                           <  1:2414725‑M1/101‑43 (MQ=255)

                                          gTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctg                                                           <  1:16775926‑M1/101‑43 (MQ=255)

                                          gTCGTTGGCACAGCGGGACATTGCGATACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctg                                                           >  1:1452893‑M1/1‑59 (MQ=255)

                                           tCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgc                                                          <  1:5432082‑M1/101‑44 (MQ=255)

                                            cGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgca                                                         <  1:8458566‑M1/101‑45 (MQ=255)

                                            cGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgca                                                         <  1:18177778‑M1/101‑45 (MQ=255)

                                            cGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgca                                                         <  1:16433434‑M1/101‑45 (MQ=255)

                                            cGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgca                                                         >  1:9082518‑M1/1‑57 (MQ=255)

                                             gTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcac                                                        >  1:3320486‑M1/1‑56 (MQ=255)

                                             gTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcac                                                        >  1:5330334‑M1/1‑56 (MQ=255)

                                             gTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcac                                                        >  1:5642284‑M1/1‑56 (MQ=255)

                                              ttGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcacc                                                       >  1:1965595‑M1/1‑55 (MQ=255)

                                               tGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgacgcgccaatattgctgcaccc                                                      >  1:1476993‑M1/1‑54 (MQ=255)

                                                ggCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccct                                                     <  1:11014956‑M1/101‑49 (MQ=255)

                                                   acaGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgag                                                  <  1:17796409‑M1/101‑52 (MQ=255)

                                                   acaGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgag                                                  >  1:15378047‑M1/1‑50 (MQ=255)

                                                    caGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagc                                                 >  1:10048474‑M1/1‑49 (MQ=255)

                                                    caGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagc                                                 <  1:15256205‑M1/101‑53 (MQ=255)

                                                    caGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagc                                                 <  1:2579702‑M1/101‑53 (MQ=255)

                                                     aGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcg                                                >  1:3601347‑M1/1‑48 (MQ=255)

                                                     aGCGGGACATTGCGCTACTGTGACAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcg                                                >  1:16678735‑M1/1‑48 (MQ=255)

                                                      gCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgc                                               <  1:7540456‑M1/101‑55 (MQ=255)

                                                        gggACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgcca                                             >  1:12132794‑M1/1‑45 (MQ=255)

                                                        gggACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgcca                                             <  1:18357538‑M1/101‑57 (MQ=255)

                                                            cATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaa                                         <  1:7759874‑M1/101‑61 (MQ=255)

                                                            cATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaa                                         <  1:12907537‑M1/101‑61 (MQ=255)

                                                              ttGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaag                                       <  1:3688212‑M1/101‑63 (MQ=255)

                                                               tGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagt                                      <  1:14910050‑M1/101‑64 (MQ=255)

                                                               tGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagt                                      <  1:7295218‑M1/101‑64 (MQ=255)

                                                                gcgcTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtc                                     >  1:795192‑M1/1‑37 (MQ=255)

                                                                  gcTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcag                                   >  1:12571068‑M1/1‑35 (MQ=255)

                                                                   cTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcaga                                  <  1:9212251‑M1/101‑68 (MQ=255)

                                                                      cTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaaga                               <  1:11802763‑M1/101‑71 (MQ=255)

                                                                       tgtgCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagat                              >  1:5148100‑M1/1‑30 (MQ=255)

                                                                       tgtgCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagat                              <  1:18069682‑M1/101‑72 (MQ=255)

                                                                        gtgCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatg                             <  1:4901936‑M1/101‑73 (MQ=255)

                                                                        gtgCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaactcagaagatg                             <  1:12484508‑M1/101‑73 (MQ=255)

                                                                         tgCCAACGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatga                            >  1:11335331‑M1/1‑28 (MQ=255)

                                                                             aaCGTTTTACTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcg                        >  1:11264804‑M1/1‑24 (MQ=255)

                                                                                     aCTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaa                <  1:2083534‑M1/101‑86 (MQ=255)

                                                                                     aCTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaa                <  1:965888‑M1/101‑86 (MQ=255)

                                                                                      cTCA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaag               <  1:17447930‑M1/101‑87 (MQ=255)

                                                                                        cA‑TGGGGCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcg             >  1:14975879‑M1/1‑13 (MQ=255)

                                                                                            ggggCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcgcac          <  1:16343921‑M1/101‑92 (MQ=255)

                                                                                             ttcatttAGGGAAGGGGCGAACAAGTCCTTGATATGAGCTCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATTATGAGTCATCAACTTACCTTCGcc         >  1:3069247/5‑101 (MQ=11)

                                                                                             gggCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcgcacg         <  1:7463697‑M1/101‑93 (MQ=255)

                                                                                              ggCTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcgcacga        <  1:13361489‑M1/101‑94 (MQ=255)

                                                                                                cTTTAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcgcacgacc      <  1:1719798‑M1/101‑96 (MQ=255)

                                                                                                  ttAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcgcacgacctg    >  1:6387573‑M1/1‑4 (MQ=255)

                                                                                                   tAGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcacacgacctga   <  1:12356630‑M1/101‑99 (MQ=255)

                                                                                                    aGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcgcacgacctgat  <  1:14187151‑M1/101‑100 (MQ=255)

                                                                                                    aGcacagaactgtggcaaaaaacgttgatgcgccaatattgctgcaccctgagcgccattaaagtcagaagatgaggcggcaataaagcgcacgacctgat  <  1:10144603‑M1/101‑100 (MQ=255)

TAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCA‑TGGGGCTTTAGGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTCGCCGACAGTG  >  NC_007779/4310262‑4310461

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.