New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 35127593 (0.010)243 (0.950) 119/178 NT 98.8% coding (535/1026 nt) cytR DNA‑binding transcriptional dual regulator
?NC_007779 = 3744262 NA (NA)intergenic (‑90/+31) insC/yidZ IS2 element protein/DNA‑binding transcriptional regulator

Only 100 of 620 total aligned reads displayed.

TCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCG  >  NC_007779/3512659‑3512859
                                                                                                    |                                                                                                    
  tGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTag                                                                                                    <  1:3277433‑M1/101‑3 (MQ=255)
  gctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAAttattta                                                                                                    >  1:12092222‑M2/93‑101 (MQ=255)
    tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTtata                                                                                                  >  1:673143‑M2/91‑101 (MQ=255)
      ggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATg                                                                                                <  1:8952972‑M2/13‑1 (MQ=255)
      gccgATGGTGATGGCGAACGAGTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactg                                                                                                >  1:11134871‑M1/1‑95 (MQ=255)
          atcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCa                                                                                            <  1:1829127‑M2/17‑1 (MQ=255)
           tcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCaa                                                                                           <  1:6863671‑M2/18‑1 (MQ=255)
           tGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggcccc                                                                                           >  1:3608657‑M1/1‑90 (MQ=255)
             gTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccct                                                                                         <  1:3718239‑M1/101‑14 (MQ=255)
              tGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctg                                                                                        >  1:8751507‑M1/1‑87 (MQ=255)
               tcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGc                                                                                       <  1:10749678‑M2/22‑1 (MQ=255)
                cgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCa                                                                                      <  1:9555854‑M2/23‑1 (MQ=255)
                     cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAAc                                                                                 >  1:5785019‑M2/74‑101 (MQ=255)
                        cgaaTTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccaga                                                                              >  1:4410656‑M1/1‑77 (MQ=255)
                           tatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTg                                                                           <  1:8402376‑M2/34‑1 (MQ=255)
                           tatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTg                                                                           >  1:4865837‑M2/68‑101 (MQ=255)
                             ttGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaacc                                                                         <  1:8671428‑M1/101‑30 (MQ=255)
                              ctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCt                                                                        <  1:2901647‑M2/37‑1 (MQ=255)
                                gcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGt                                                                      <  1:4194978‑M2/39‑1 (MQ=255)
                                cACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaat                                                                      <  1:10229750‑M1/101‑33 (MQ=255)
                                 aCCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaata                                                                     <  1:7001616‑M1/101‑34 (MQ=255)
                                  ccGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatat                                                                    <  1:1142610‑M1/101‑35 (MQ=255)
                                   cGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatc                                                                   <  1:12049052‑M1/101‑36 (MQ=255)
                                   cGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaacaaatatc                                                                   >  1:245256‑M1/1‑66 (MQ=255)
                                    ggagctggagctGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatca                                                                  <  1:5501797‑M1/101‑37 (MQ=255)
                                     agcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGc                                                                 >  1:12607221‑M2/58‑101 (MQ=255)
                                      agctggagctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcact                                                                >  1:10362466‑M1/1‑63 (MQ=255)
                                       cgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCg                                                               >  1:6638383‑M2/56‑101 (MQ=255)
                                       cgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCg                                                               >  1:6397646‑M2/56‑101 (MQ=255)
                                       cgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCg                                                               >  1:7418038‑M2/56‑101 (MQ=255)
                                        gggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCgg                                                              >  1:6226906‑M2/55‑101 (MQ=255)
                                         ggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGt                                                             >  1:11578216‑M2/54‑101 (MQ=255)
                                           cttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTcc                                                           <  1:1919103‑M2/50‑1 (MQ=255)
                                            agctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaata                                                          >  1:5849585‑M1/1‑57 (MQ=255)
                                            agctgCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaata                                                          <  1:12230689‑M1/101‑45 (MQ=255)
                                             tgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCg                                                         >  1:7905365‑M2/50‑101 (MQ=255)
                                               tgCCTACAGTTCATATCGACAATCTGGCCGCCGCATTTTATGCAGTAAATTATTagactggccccctgaatctccagacaaccaataccacttaaataagt                                                       <  1:7840275‑M1/101‑48 (MQ=255)
                                                aatgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAag                                                      <  1:9096893‑M2/55‑1 (MQ=255)
                                                 atgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAaga                                                     <  1:5549260‑M2/56‑1 (MQ=255)
                                                  tgggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAagag                                                    >  1:10967229‑M2/45‑101 (MQ=255)
                                                  cTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgat                                                    <  1:13007656‑M1/101‑51 (MQ=255)
                                                   tACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgata                                                   <  1:5166962‑M1/101‑52 (MQ=255)
                                                   gggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAgaga                                                   >  1:945398‑M2/44‑101 (MQ=255)
                                                    ggttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGAt                                                  <  1:8125909‑M2/59‑1 (MQ=255)
                                                     gttaagtgataacaggtgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATg                                                 >  1:9898401‑M2/42‑101 (MQ=255)
                                                     gttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATg                                                 <  1:11834971‑M2/60‑1 (MQ=255)
                                                     cAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagt                                                 <  1:11729173‑M1/101‑54 (MQ=255)
                                                      ttaagtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGc                                                >  1:11341834‑M2/41‑101 (MQ=255)
                                                       gTTCATATCGACAATCTGACCGCCGCATTTGCTGCAGTAAATTATTcgactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtct                                               <  1:9359430‑M1/101‑56 (MQ=255)
                                                          gtgataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCt                                            >  1:4294445‑M2/37‑101 (MQ=255)
                                                           atatCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaat                                           <  1:7701328‑M1/101‑60 (MQ=255)
                                                           atatCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaat                                           >  1:2573979‑M1/1‑42 (MQ=255)
                                                            tatCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaata                                          >  1:12837634‑M1/1‑41 (MQ=255)
                                                            tatCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaata                                          >  1:7573747‑M1/1‑41 (MQ=255)
                                                             ataacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCtgtg                                         >  1:3808550‑M2/34‑101 (MQ=255)
                                                             atCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatac                                         >  1:10435388‑M1/1‑40 (MQ=255)
                                                              tCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatact                                        <  1:12742227‑M1/101‑63 (MQ=255)
                                                               cGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatacta                                       <  1:5665044‑M1/101‑64 (MQ=255)
                                                               aacagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTc                                       >  1:4502020‑M2/32‑101 (MQ=255)
                                                                 cagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCAc                                     >  1:8037731‑M2/30‑101 (MQ=255)
                                                                 cagatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCAc                                     <  1:3191066‑M2/72‑1 (MQ=255)
                                                                 aCAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagt                                     >  1:7141230‑M1/1‑36 (MQ=255)
                                                                 aCAATCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagt                                     <  1:6014029‑M1/101‑66 (MQ=255)
                                                                   gatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTa                                   >  1:10006803‑M2/28‑101 (MQ=255)
                                                                   gatgtctggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTa                                   >  1:7305591‑M2/28‑101 (MQ=255)
                                                                    aTCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt                                  >  1:6491833‑M1/1‑33 (MQ=255)
                                                                     tCTGACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatcctagttttt                                 >  1:11900091‑M1/1‑32 (MQ=255)
                                                                        gACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga                              <  1:3042454‑M1/101‑73 (MQ=255)
                                                                        gACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga                              <  1:5027718‑M1/101‑73 (MQ=255)
                                                                        gACCGCCGCATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttaga                              >  1:2393066‑M1/1‑29 (MQ=255)
                                                                        ctcgaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGcc                              >  1:12401954‑M2/23‑101 (MQ=255)
                                                                         tggaaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCt                             <  1:11044531‑M2/80‑1 (MQ=255)
                                                                           cgccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagacta                           >  1:6101888‑M1/1‑26 (MQ=255)
                                                                            gccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactag                          <  1:9678790‑M1/101‑77 (MQ=255)
                                                                            gccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactag                          >  1:3442889‑M1/1‑25 (MQ=255)
                                                                            aaatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCa                          <  1:4940584‑M2/83‑1 (MQ=255)
                                                                             ccgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt                         >  1:10558409‑M1/1‑24 (MQ=255)
                                                                             aatataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCaa                         >  1:5958902‑M2/18‑101 (MQ=255)
                                                                              cgcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtc                        >  1:8486577‑M1/1‑23 (MQ=255)
                                                                               tataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAgg                       >  1:1012900‑M2/16‑101 (MQ=255)
                                                                               gcATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtca                       <  1:2803578‑M1/101‑80 (MQ=255)
                                                                                cATTTGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcat                      <  1:13130561‑M1/101‑81 (MQ=255)
                                                                                ataggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGc                      >  1:1533319‑M2/15‑101 (MQ=255)
                                                                                  aggggcaaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTa                    >  1:2691017‑M2/13‑101 (MQ=255)
                                                                                    tGATGCAGTAAATTATTagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgga                  >  1:5340426‑M1/1‑17 (MQ=255)
                                                                                       caaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTc               >  1:1715090‑M2/8‑101 (MQ=255)
                                                                                       caaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTc               >  1:12517609‑M2/8‑101 (MQ=255)
                                                                                        aaatccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGCTCa              >  1:8615121‑M2/7‑101 (MQ=255)
                                                                                           tccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCTCGAAGAGACGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgc           >  1:1450628‑M2/4‑101 (MQ=255)
                                                                                            ccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgcg          <  1:9227376‑M2/99‑1 (MQ=255)
                                                                                            ccAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGgcg          <  1:4669575‑M2/99‑1 (MQ=255)
                                                                                              AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCt        >  1:1765006‑M2/1‑101 (MQ=255)
                                                                                              AATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCt        <  1:11535739‑M2/101‑1 (MQ=255)
                                                                                                ttatttatATGAGCACGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGc      <  1:8897655/101‑1 (MQ=255)
                                                                                                 tatttatATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCg     >  1:9048880/1‑101 (MQ=255)
                                                                                                 gaatagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattg     >  1:4055180‑M1/4‑4 (MQ=255)
                                                                                                   tttatATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTc   <  1:2168163/101‑1 (MQ=255)
                                                                                                    ttatATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCg  >  1:8212348/1‑101 (MQ=255)
                                                                                                    tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatcctagtttttagactagtcattggagaacagatgattgatg  <  1:3904913‑M1/101‑101 (MQ=255)
                                                                                                    tagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatg  <  1:2007966‑M1/101‑101 (MQ=255)
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TCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAGCTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGATTGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCG  >  NC_007779/3512659‑3512859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.