| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,750,123 | C→T | 5.4% | G122S (GGC→AGC) | tnaA ← | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,750,123 | 0 | C→T | 5.4% | 25.4 ‑2.9 ‑0.1 | 260 | G122S (GGC→AGC) | tnaA | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| Reads supporting (aligned to +/- strand): new base (3/11): ref base (122/124): total (125/135) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.33e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.87e-01 | ||||||||||
Only 100 of 281 total aligned reads displayed.
ATAGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCCTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGATATTT > NC_007779/3750025‑3750223 | ataGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTtt > 1:2651342/1‑101 (MQ=255)ataGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTtt < 1:8930127/101‑1 (MQ=255) aGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTtttt < 1:2228912/101‑1 (MQ=255) aGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTtttt < 1:10748540/101‑1 (MQ=255) gTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTg > 1:6958382/1‑101 (MQ=255) aCGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTc < 1:1013016/101‑1 (MQ=255) aCGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTc < 1:4421448/101‑1 (MQ=255) aCGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTc < 1:1677997/101‑1 (MQ=255) cACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTcgcg > 1:985257/1‑101 (MQ=255) aCGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGt > 1:4166366/1‑101 (MQ=255) ggTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGttt > 1:7980625/1‑101 (MQ=255) gTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGtttt < 1:11099288/101‑1 (MQ=255) gTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGtttt < 1:6000805/101‑1 (MQ=255) aCAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTTGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGtttttt > 1:3007099/1‑101 (MQ=255) cAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTa < 1:1274087/101‑1 (MQ=255) aGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTaa > 1:12758769/1‑101 (MQ=255) aGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTaa > 1:7729555/1‑101 (MQ=255) cGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCa < 1:11004012/101‑1 (MQ=255) gTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAg > 1:12973817/1‑101 (MQ=255) gTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAg < 1:119005/101‑1 (MQ=255) tGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTa < 1:4503257/101‑1 (MQ=255) aTCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTAcc > 1:7440362/1‑101 (MQ=255) tCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCg > 1:3932939/1‑101 (MQ=255) tCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCg > 1:7187969/1‑101 (MQ=255) cTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCgg > 1:8692760/1‑101 (MQ=255) tGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGa > 1:2427600/1‑101 (MQ=255) ggCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGaa < 1:12559055/101‑1 (MQ=255) ggCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGaa < 1:11286733/101‑1 (MQ=255) cTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAata > 1:583084/1‑101 (MQ=255) cTATGGCCCGGCGTGGTATCAAATAAATAGTTAGAGAATGCCACTATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAata < 1:9539272/101‑1 (MQ=255) tATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAatat < 1:10417301/101‑1 (MQ=255) aTGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAAtata > 1:1205625/1‑101 (MQ=255) tGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAg < 1:2892650/101‑1 (MQ=255) ggCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGa < 1:11487537/101‑1 (MQ=255) ggCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGa < 1:8462/101‑1 (MQ=255) gCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGAt > 1:8142819/1‑101 (MQ=255) cccTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGAtt < 1:11232571/101‑1 (MQ=255) ccTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTTCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGAttt < 1:2515099/101‑1 (MQ=255) cGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGctc < 1:6285638/101‑1 (MQ=255) gTGGTATCCACGAAATAGTTAGACAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGctct < 1:8213834/101‑1 (MQ=255) gTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGctct < 1:6160191/101‑1 (MQ=255) gTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGctct > 1:9104370/1‑101 (MQ=255) ggTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTgc < 1:4979673/101‑1 (MQ=255) ggTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTgc > 1:4727211/1‑101 (MQ=255) aTCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGcc > 1:11522210/1‑101 (MQ=255) cAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCAc > 1:553511/1‑101 (MQ=255) cAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCAc < 1:6863940/101‑1 (MQ=255) aacgAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACg > 1:10098270/4‑101 (MQ=255) aaaGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACg > 1:9694535/1‑101 (MQ=255) aaGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACgg < 1:273857/101‑1 (MQ=255) aGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGc < 1:12220568/101‑1 (MQ=255) aGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGc > 1:8272723/1‑101 (MQ=255) aGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGc > 1:12462965/1‑101 (MQ=255) aaaTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGccc > 1:5263049/1‑101 (MQ=255) aaTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCt > 1:2863424/1‑101 (MQ=255) aaTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCt < 1:6759625/101‑1 (MQ=255) aaTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCt < 1:8480951/101‑1 (MQ=255) aaTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCt < 1:516910/101‑1 (MQ=255) aTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTg > 1:1069595/1‑101 (MQ=255) aTAGTTAGAGAACGCCACCACTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTg < 1:11762355/101‑1 (MQ=255) tAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGAGCCACGGCCCTgg < 1:4599559/101‑1 (MQ=255) aGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGt > 1:6518954/1‑101 (MQ=255) tAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAg > 1:12136615/1‑101 (MQ=255) gagaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTc < 1:3387470/101‑1 (MQ=255) agaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCg > 1:10589713/1‑101 (MQ=255) gaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCgg < 1:9297470/101‑1 (MQ=255) aaCGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGa > 1:1171388/1‑101 (MQ=255) cGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAAt < 1:7593347/101‑1 (MQ=255) cGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAAt < 1:3632162/101‑1 (MQ=255) cGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAAt > 1:12358061/1‑101 (MQ=255) gCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATg < 1:5125797/101‑1 (MQ=255) caccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgt > 1:1944744/1‑101 (MQ=255) ccttttGCCGCGAATCAGG‑CTTTTTACTGCTCGGCTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTa < 1:5874300/99‑1 (MQ=255) caTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTa > 1:5144113/1‑101 (MQ=255) aTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTAt < 1:9498079/101‑1 (MQ=255) tttGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTg < 1:1380724/101‑1 (MQ=255) tttGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTg < 1:12701245/101‑1 (MQ=255) tttGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTg < 1:2612706/101‑1 (MQ=255) tgctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGAt < 1:5677997/101‑1 (MQ=255) tgctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGAt < 1:11982888/101‑1 (MQ=255) gctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATa > 1:6602404/1‑101 (MQ=255) gctgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATa < 1:150901/101‑1 (MQ=255) atgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATAAAGACCGGAATATAGATGTGCTCTGCGCCACGGCCCTGGTGAGGCGGAATGGTGTATTGATaa > 1:1119093/2‑101 (MQ=255) tgcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAAc > 1:9756497/1‑101 (MQ=255) gcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAAcc < 1:6034819/101‑1 (MQ=255) gcGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAAcc < 1:4834387/101‑1 (MQ=255) gATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaa > 1:1078191/1‑101 (MQ=255) gATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaa > 1:7900104/1‑101 (MQ=255) gATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaa > 1:13029952/1‑101 (MQ=255) tCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAg > 1:1732558/1‑101 (MQ=255) tCCAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAg > 1:2316670/1‑101 (MQ=255) ccAGG‑CTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGa < 1:1473965/101‑1 (MQ=255) caggcTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGat > 1:10294523/5‑101 (MQ=255) aggcTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGata > 1:5020341/4‑101 (MQ=255) aggcTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGata > 1:2569961/4‑101 (MQ=255) aggcTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGata > 1:4146699/4‑101 (MQ=255) aggcTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGata < 1:3863005/98‑1 (MQ=255) ggcTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGatat < 1:6994932/99‑1 (MQ=255) gcTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGCAATGGTGTCTTGATAACCAAAGATAtt > 1:3287060/2‑101 (MQ=255) cTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGATAttt < 1:4777839/101‑1 (MQ=255) | ATAGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCCTTTTTCCTGCTCGCGTTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGATATTT > NC_007779/3750025‑3750223 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |