New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 3744263NA (NA)227 (0.880) 131/180 NT 100% intergenic (‑91/+30) insC/yidZ IS2 element protein/DNA‑binding transcriptional regulator
?NC_007779 3903274 = 0 (0.000)coding (37/825 nt) bax hypothetical protein

Only 100 of 499 total aligned reads displayed.

TTCAACTCTCAAATTTGTGAAAAATATAAGGTGTTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCAAAAGTCCCACTTAACTAAAGCTAGTAATAA  >  NC_007779/3903174‑3903374
                                                                                                    |                                                                                                    
         cAAATTTGTGAAAAATATAAGGTGTTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggat                                                                                             >  1:12603187‑M1/1‑97 (MQ=255)
         cAAATTTGTGAAAAATATAAGGTGTTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggat                                                                                             >  1:10140875‑M1/1‑97 (MQ=255)
         cAAATTTGTGAAAAATATAAGGTGTTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggat                                                                                             <  1:2939159‑M1/101‑5 (MQ=255)
         cAAATTTGTGAAAAATATAAGGTGTTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggat                                                                                             <  1:11753528‑M1/101‑5 (MQ=255)
            aTTTGTGAAAAATATAAGGTGTTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttg                                                                                          >  1:12784147‑M1/1‑94 (MQ=255)
            aTTTGTGAAAAATATAAGGTGTTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttg                                                                                          >  1:8563838‑M1/1‑94 (MQ=255)
             tctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTact                                                                                         >  1:8818015‑M2/88‑101 (MQ=255)
                gtgAAAAATATAAGGTGTTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccc                                                                                      >  1:12103022‑M1/1‑90 (MQ=255)
                  aatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTactcactc                                                                                    >  1:6567881‑M2/83‑101 (MQ=255)
                    tgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTg                                                                                  <  1:299093‑M2/21‑1 (MQ=255)
                     gactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTgg                                                                                 >  1:8963863‑M2/80‑101 (MQ=255)
                     gactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTgg                                                                                 >  1:9470790‑M2/80‑101 (MQ=255)
                     aaaTATAAGGTGTTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatat                                                                                 <  1:1066645‑M1/101‑17 (MQ=255)
                      actagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGgt                                                                                <  1:5392685‑M2/23‑1 (MQ=255)
                      actagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGgt                                                                                >  1:9288005‑M2/79‑101 (MQ=255)
                      aaTATAAGGTGTTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatt                                                                                <  1:6124838‑M1/101‑18 (MQ=255)
                       ctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGgtg                                                                               >  1:4342158‑M2/78‑101 (MQ=255)
                       atatAAGGTGTTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatattt                                                                               >  1:1937142‑M1/1‑83 (MQ=255)
                       atatAAGGTGTTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatattt                                                                               >  1:5096880‑M1/1‑83 (MQ=255)
                        tataAGGTGTTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttc                                                                              <  1:8763038‑M1/101‑20 (MQ=255)
                         ataAGGTGTTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttcc                                                                             >  1:1087948‑M1/1‑81 (MQ=255)
                          gtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGttt                                                                            <  1:1672944‑M2/27‑1 (MQ=255)
                           aaGGTGTTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccag                                                                           >  1:399650‑M1/1‑79 (MQ=255)
                            ctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTc                                                                          >  1:8278363‑M2/73‑101 (MQ=255)
                              gtgtTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagaca                                                                        <  1:2107550‑M1/101‑26 (MQ=255)
                               tgtTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacat                                                                       <  1:987033‑M1/101‑27 (MQ=255)
                               aaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAg                                                                       >  1:3177434‑M2/70‑101 (MQ=255)
                                  actagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGa                                                                    <  1:1709115‑M2/35‑1 (MQ=255)
                                   ggAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgt                                                                   >  1:8038491‑M1/1‑71 (MQ=255)
                                    tagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAgg                                                                  >  1:2393177‑M2/65‑101 (MQ=255)
                                    gAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgtt                                                                  <  1:7584222‑M1/101‑32 (MQ=255)
                                    gAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgtt                                                                  >  1:1812101‑M1/1‑70 (MQ=255)
                                     agtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGgt                                                                 >  1:7830865‑M2/64‑101 (MQ=255)
                                       tattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGgtgt                                                               >  1:385363‑M2/62‑101 (MQ=255)
                                       tattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGgtgt                                                               >  1:5960545‑M2/62‑101 (MQ=255)
                                         ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTa                                                             >  1:2324334‑M2/60‑101 (MQ=255)
                                         ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTa                                                             <  1:7702351‑M2/42‑1 (MQ=255)
                                         ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTa                                                             >  1:10336936‑M2/60‑101 (MQ=255)
                                          ttAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcact                                                            >  1:5593666‑M1/1‑64 (MQ=255)
                                          ttAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcact                                                            <  1:7122128‑M1/101‑38 (MQ=255)
                                           tAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcactt                                                           >  1:10552366‑M1/1‑63 (MQ=255)
                                           aagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGc                                                           >  1:2596182‑M2/58‑101 (MQ=255)
                                           aagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGc                                                           <  1:9022931‑M2/44‑1 (MQ=255)
                                           aagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGc                                                           <  1:6733179‑M2/44‑1 (MQ=255)
                                              actatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGaa                                                        >  1:2738602‑M2/55‑101 (MQ=255)
                                              actatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGaa                                                        >  1:7304813‑M2/55‑101 (MQ=255)
                                               ctatcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAg                                                       <  1:7635962‑M2/48‑1 (MQ=255)
                                                 cGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaaccca                                                     >  1:11427713‑M1/1‑57 (MQ=255)
                                                  tcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACg                                                    <  1:4966200‑M2/51‑1 (MQ=255)
                                                  tcacttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACg                                                    >  1:11643202‑M2/51‑101 (MQ=255)
                                                  gACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccat                                                    >  1:12421624‑M1/1‑56 (MQ=255)
                                                    acttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGca                                                  <  1:4254373‑M2/53‑1 (MQ=255)
                                                     cAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattac                                                 >  1:911299‑M1/1‑53 (MQ=255)
                                                     cAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattac                                                 >  1:10021804‑M1/1‑53 (MQ=255)
                                                      ttatttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGcaca                                                >  1:5740894‑M2/47‑101 (MQ=255)
                                                      aGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattaca                                                >  1:7973986‑M1/1‑52 (MQ=255)
                                                        gagaCCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaag                                              <  1:6488064‑M1/101‑52 (MQ=255)
                                                        atttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGcacaca                                              <  1:6929068‑M2/57‑1 (MQ=255)
                                                        atttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGcacaca                                              <  1:11317102‑M2/57‑1 (MQ=255)
                                                         tttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACacaa                                             >  1:9793805‑M2/44‑101 (MQ=255)
                                                         agaCCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagc                                             <  1:5248130‑M1/101‑53 (MQ=255)
                                                         agaCCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagc                                             <  1:885936‑M1/101‑53 (MQ=255)
                                                         agaCCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagc                                             >  1:3378658‑M1/1‑49 (MQ=255)
                                                          ttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACacaac                                            <  1:4718512‑M2/59‑1 (MQ=255)
                                                          ttaagtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACACACacaac                                            >  1:2494628‑M2/43‑101 (MQ=255)
                                                          gaCCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagcc                                            <  1:11058266‑M1/101‑54 (MQ=255)
                                                              gtgatattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACacaacaaca                                        <  1:3501195‑M2/63‑1 (MQ=255)
                                                                atgatTTTGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgc                                      >  1:5645314‑M1/1‑42 (MQ=255)
                                                                  tattggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGa                                    >  1:11216049‑M2/35‑101 (MQ=255)
                                                                     tggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTc                                 >  1:3934074‑M2/32‑101 (MQ=255)
                                                                     tggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTc                                 <  1:10458000‑M2/70‑1 (MQ=255)
                                                                      ggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCa                                >  1:5809185‑M2/31‑101 (MQ=255)
                                                                      ggttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCa                                <  1:1546235‑M2/71‑1 (MQ=255)
                                                                       tGACTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagat                               >  1:10762042‑M1/1‑35 (MQ=255)
                                                                       tGACTCCCATACGACGATATGGGGCGATGATTCTTggattcgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagat                               <  1:8140066‑M1/101‑67 (MQ=255)
                                                                       gttgtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCaa                               >  1:740304‑M2/30‑101 (MQ=255)
                                                                        tacTCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagata                              <  1:12493213‑M1/100‑68 (MQ=255)
                                                                          gtctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCAAAAg                            <  1:12223516‑M2/75‑1 (MQ=255)
                                                                           tCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattc                           >  1:3326870‑M1/1‑31 (MQ=255)
                                                                           tCCCATACGACGATATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattc                           >  1:6665216‑M1/1‑31 (MQ=255)
                                                                            ctggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCAAAAGTc                          <  1:266423‑M2/77‑1 (MQ=255)
                                                                             tggagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCAAAAGTcc                         >  1:6821233‑M2/24‑101 (MQ=255)
                                                                               gagattcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCAAAAGTCCCa                       >  1:13030284‑M2/22‑101 (MQ=255)
                                                                                  attcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCAAAAGTCCCACtt                    <  1:12409629‑M2/83‑1 (MQ=255)
                                                                                  attcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCAAAAGTCCCACtt                    >  1:8632017‑M2/19‑101 (MQ=255)
                                                                                   ttcagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTATTAGCGAAGACGCACACAACAACAGCGAGTCAAAAGTCCCACTTa                   >  1:8194527‑M2/18‑101 (MQ=255)
                                                                                   gacgaTATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcg                   <  1:6311170‑M1/101‑79 (MQ=255)
                                                                                   gacgaTATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcg                   >  1:4869236‑M1/1‑23 (MQ=255)
                                                                                    acgaTATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcga                  <  1:12868712‑M1/101‑80 (MQ=255)
                                                                                     cagggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCAAAAGTCCCACTTAAc                 <  1:4130975‑M2/86‑1 (MQ=255)
                                                                                      gaTATGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagc                >  1:11998952‑M1/1‑20 (MQ=255)
                                                                                      agggggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCAAAAGTCCCACTTAACt                >  1:9212714‑M2/15‑101 (MQ=255)
                                                                                          tGGGGCGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgata            >  1:11886367‑M1/1‑16 (MQ=255)
                                                                                          ggccagtctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCAAAAGTCCCACTTAACTAAAg            >  1:4446147‑M2/11‑101 (MQ=255)
                                                                                               cGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataaccca       <  1:1471535‑M1/101‑91 (MQ=255)
                                                                                               cGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataaccca       <  1:3732402‑M1/101‑91 (MQ=255)
                                                                                               cGATGATTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataaccca       <  1:3672938‑M1/101‑91 (MQ=255)
                                                                                                tctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCAAAAGTCCCACTTAACTAAAGCTAGta      >  1:6996544‑M2/5‑101 (MQ=255)
                                                                                                 ctaATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCAAAAGTCCCACTTAACTAAAGCTAGtaa     <  1:12315847‑M2/98‑1 (MQ=255)
                                                                                                   gatTCTTggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgc   <  1:3546257‑M1/101‑95 (MQ=255)
                                                                                                    |                                                                                                    
TTCAACTCTCAAATTTGTGAAAAATATAAGGTGTTGGAATGATTAAATCCGACCAGGAGACCTGATGATTTTGACTCCCATACGACGATATGGGGCGATGATTCTTATGTTACTCACTCTGGTGTTTTCGAGTGAGGTGTTAGCGAAGACGCACACAACAACAGCGAGTCAAAAGTCCCACTTAACTAAAGCTAGTAATAA  >  NC_007779/3903174‑3903374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.