Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,898,657 C→G 100% L259V (CTG→GTG)  yiaJ → DNA‑binding transcriptional repressor

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077793,898,6570C→G100.0% 1160.4 267L259V (CTG→GTG) yiaJDNA‑binding transcriptional repressor
Reads supporting (aligned to +/- strand):  new base (116/151):  ref base (0/0):  total (116/151)

Only 100 of 268 total aligned reads displayed.

CGGTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCACTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCAAAACT  >  NC_007779/3898559‑3898754
                                                                                                  |                                                                                                 
cGGTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTg                                                                                                 <  1:394291/101‑1 (MQ=255)
 ggTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGc                                                                                                >  1:12910563/1‑101 (MQ=255)
 ggTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGc                                                                                                >  1:10962151/1‑101 (MQ=255)
 ggTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGc                                                                                                <  1:4453224/101‑1 (MQ=255)
  gtgtTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCg                                                                                               >  1:8018530/1‑101 (MQ=255)
  gtgtTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCg                                                                                               <  1:5091069/101‑1 (MQ=255)
  gtgtTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCg                                                                                               <  1:1765145/101‑1 (MQ=255)
   tgtTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGt                                                                                              >  1:1247957/1‑101 (MQ=255)
   tgtTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGAAGAGAAAAATCTCCTGAAACCAGTGCGt                                                                                              <  1:3631145/101‑1 (MQ=255)
    gtTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTg                                                                                             <  1:10232002/101‑1 (MQ=255)
      ttGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGaa                                                                                           <  1:1211774/101‑1 (MQ=255)
       tGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGaaa                                                                                          <  1:6886612/101‑1 (MQ=255)
         atatTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAAcc                                                                                        <  1:711016/101‑1 (MQ=255)
            ttCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACcgcg                                                                                     <  1:902785/101‑1 (MQ=255)
              cATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCa                                                                                   <  1:1676183/101‑1 (MQ=255)
               aTGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAg                                                                                  <  1:7785381/101‑1 (MQ=255)
               aTGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAg                                                                                  <  1:1363169/101‑1 (MQ=255)
                tGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAgg                                                                                 <  1:9098800/101‑1 (MQ=255)
                    cGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTAt                                                                             >  1:9819522/1‑101 (MQ=255)
                    cGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTAt                                                                             <  1:7486568/101‑1 (MQ=255)
                     gggTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTAtt                                                                            <  1:455235/101‑1 (MQ=255)
                     gggTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTAtt                                                                            <  1:12205722/101‑1 (MQ=255)
                     gggTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTAtt                                                                            >  1:11318251/1‑101 (MQ=255)
                     gggTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTAtt                                                                            >  1:3542236/1‑101 (MQ=255)
                     gggTGCCGTACGCCCTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTAtt                                                                            <  1:7433585/101‑1 (MQ=255)
                      ggTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTAttt                                                                           >  1:5522641/1‑101 (MQ=255)
                       gTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTc                                                                          >  1:10843610/1‑101 (MQ=255)
                         gCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTa                                                                        >  1:3341471/1‑101 (MQ=255)
                           cGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCAGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAAt                                                                      >  1:1886409/1‑101 (MQ=255)
                            gTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATg                                                                     >  1:1331753/1‑101 (MQ=255)
                             tACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGa                                                                    >  1:6175431/1‑101 (MQ=255)
                             tACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGa                                                                    >  1:9349877/1‑101 (MQ=255)
                              aCGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGaa                                                                   >  1:9561202/1‑101 (MQ=255)
                               cGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAAc                                                                  <  1:2393205/101‑1 (MQ=255)
                                gCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACt                                                                 <  1:11464685/101‑1 (MQ=255)
                                gCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACt                                                                 >  1:9580994/1‑101 (MQ=255)
                                  cGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTgg                                                               <  1:5481523/101‑1 (MQ=255)
                                   gtgtCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTggg                                                              <  1:10172944/101‑1 (MQ=255)
                                    tgtCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGa                                                             <  1:11687292/101‑1 (MQ=255)
                                     gtCGATTTCGCTTTCGACATAACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGAt                                                            <  1:259664/101‑1 (MQ=255)
                                        gATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTa                                                         <  1:4511983/101‑1 (MQ=255)
                                         aTTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTAc                                                        >  1:10724190/1‑101 (MQ=255)
                                          tttCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACt                                                       >  1:2674233/1‑101 (MQ=255)
                                           ttCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTg                                                      <  1:986900/101‑1 (MQ=255)
                                           ttCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTg                                                      <  1:10575772/101‑1 (MQ=255)
                                            tCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGt                                                     <  1:1625566/101‑1 (MQ=255)
                                            tCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGt                                                     >  1:2444142/1‑101 (MQ=255)
                                              gCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCa                                                   >  1:1277691/1‑101 (MQ=255)
                                              gCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTACTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCa                                                   <  1:1501228/101‑1 (MQ=255)
                                               cTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAg                                                  <  1:3077720/101‑1 (MQ=255)
                                                tttCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAgg                                                 <  1:8930286/101‑1 (MQ=255)
                                                  tCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGa                                               >  1:10372103/1‑101 (MQ=255)
                                                  tCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGa                                               <  1:61312/101‑1 (MQ=255)
                                                  tCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGa                                               >  1:12992889/1‑101 (MQ=255)
                                                     aCATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGa                                            >  1:6835682/1‑101 (MQ=255)
                                                     aCATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGa                                            <  1:48589/101‑1 (MQ=255)
                                                       aTCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGAcc                                          >  1:2767356/1‑101 (MQ=255)
                                                        tCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCt                                         <  1:4703896/101‑1 (MQ=255)
                                                        tCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCt                                         <  1:7868640/101‑1 (MQ=255)
                                                         cACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTg                                        <  1:8547888/101‑1 (MQ=255)
                                                         cACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTg                                        <  1:11101996/101‑1 (MQ=255)
                                                         cACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTg                                        <  1:5692406/101‑1 (MQ=255)
                                                           cGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTggg                                      >  1:8086292/1‑101 (MQ=255)
                                                           cGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTggg                                      >  1:4126689/1‑101 (MQ=255)
                                                             tCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGgcg                                    >  1:3206164/1‑101 (MQ=255)
                                                             tCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGgcg                                    >  1:7259697/1‑101 (MQ=255)
                                                               tGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGcgcg                                  <  1:5183351/101‑1 (MQ=255)
                                                               tGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGcgcg                                  >  1:7005049/1‑101 (MQ=255)
                                                                 aaaCAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGAt                                >  1:12561140/1‑101 (MQ=255)
                                                                 aaaCAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGAt                                >  1:2727035/1‑101 (MQ=255)
                                                                  aaCAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATc                               <  1:631714/101‑1 (MQ=255)
                                                                  aaCAGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATc                               <  1:8220064/101‑1 (MQ=255)
                                                                     aGGTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATcaca                            >  1:8753173/1‑101 (MQ=255)
                                                                       gTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATa                          >  1:3150709/1‑101 (MQ=255)
                                                                       gTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATa                          <  1:4254649/101‑1 (MQ=255)
                                                                       gTGGGAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATa                          <  1:5017846/101‑1 (MQ=255)
                                                                         gggAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAAc                        >  1:5965139/1‑101 (MQ=255)
                                                                         gggAGAGAAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAAc                        <  1:8880155/101‑1 (MQ=255)
                                                                           gagagaAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGc                      <  1:1593855/101‑1 (MQ=255)
                                                                           gagagaAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGc                      >  1:7616887/1‑101 (MQ=255)
                                                                               gaAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTg                  <  1:5854954/101‑1 (MQ=255)
                                                                               gaAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTg                  >  1:2132384/1‑101 (MQ=255)
                                                                               gaAAAATCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTg                  >  1:2370199/1‑101 (MQ=255)
                                                                                aaaaaTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTgg                 <  1:11795486/101‑1 (MQ=255)
                                                                                 aaaaTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGa                >  1:4640419/1‑101 (MQ=255)
                                                                                  aaaTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGAc               <  1:2632503/101‑1 (MQ=255)
                                                                                  aaaTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGAc               <  1:8399533/101‑1 (MQ=255)
                                                                                  aaaTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGAc               >  1:12317414/1‑101 (MQ=255)
                                                                                   aaTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACa              >  1:3009496/1‑101 (MQ=255)
                                                                                   aaTCTCCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCAAATAACGCTTTGGACa              >  1:5893694/1‑101 (MQ=255)
                                                                                       tcCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTg          <  1:10983020/101‑1 (MQ=255)
                                                                                       tcCTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTg          >  1:11375703/1‑101 (MQ=255)
                                                                                        ccTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGc         <  1:1529476/101‑1 (MQ=255)
                                                                                         cTGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGcc        >  1:2051517/1‑101 (MQ=255)
                                                                                          tGAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCa       >  1:6659586/1‑101 (MQ=255)
                                                                                           gAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCaa      <  1:9167189/101‑1 (MQ=255)
                                                                                           gAAACCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCaa      >  1:3971312/1‑101 (MQ=255)
                                                                                            aaaCCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCaaa     <  1:11637531/101‑1 (MQ=255)
                                                                                             aaCCAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCaaaa    >  1:5991714/1‑101 (MQ=255)
                                                                                               ccAGTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCAAAACt  >  1:8303748/1‑101 (MQ=255)
                                                                                                  |                                                                                                 
CGGTGTTTGATATTCATGGGCGGGTGCCGTACGCCGTGTCGATTTCGCTTTCGACATCACGTCTGAAACAGGTGGGAGAGAAAAATCTCCTGAAACCACTGCGTGAAACCGCGCAGGCTATTTCTAATGAACTGGGATTTACTGTCAGGGATGACCTGGGCGCGATCACATAACGCTTTGGACAAGTGCCAAAACT  >  NC_007779/3898559‑3898754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.