New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 2411458 =NA (NA)188 (0.730) 121/180 NT 94.9% intergenic (‑147/+15) lrhA/insB DNA‑binding transcriptional repressor/IS1 element protein
?NC_007779 = 2985055 10 (0.040)coding (553/1230 nt) yqeG transporter

Only 100 of 256 total aligned reads displayed.

ACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_007779/2411557‑2411458
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATCCCATTAC  <  NC_007779/2985055‑2984956
                                                                                                                                                                                                        
ACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCC                                                                                                     >  1:3691246/1‑101
ACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCGGAACATAAAACACTATCAATAAGTTGGAGTCATTACCC                                                                                                     <  1:8720053/101‑1
 CGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTTGAGTCATTACCCT                                                                                                    >  1:8006701/1‑101
 CGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCg                                                                                                    <  1:3392151/101‑2
 CGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCg                                                                                                    <  1:1544375/101‑2
 CGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCg                                                                                                    >  1:8561478/1‑100
  GGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgc                                                                                                   <  1:10350699/101‑3
  GGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgc                                                                                                   >  1:3332781/1‑99
  GGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgc                                                                                                   >  1:2969423/1‑99
  GGAAGTCGCTGTCGTTCTCAAAATCGGGGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgc                                                                                                   >  1:1453658/1‑99
   GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTAC                                                                                                  <  1:8637530/101‑1
    AAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgcta                                                                                                 <  1:3608128/101‑5
    AAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgcta                                                                                                 <  1:960806/101‑5
    AAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACC                                                                                                 <  1:539485/101‑1
     AGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCT                                                                                                <  1:11297369/101‑1
      GTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgctatt                                                                                               <  1:5576660/101‑7
       TCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgctattg                                                                                              <  1:6396509/101‑8
         GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgctattgca                                                                                            >  1:2846006/1‑92
         GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgctattgca                                                                                            >  1:939022/1‑92
         GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGT                                                                                            >  1:9310397/1‑101
         GCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGT                                                                                            >  1:2156954/1‑101
          CTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCgctattgcaa                                                                                           <  1:1207923/101‑11
          CTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTT                                                                                           <  1:11991284/101‑1
          CTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTT                                                                                           <  1:6254518/101‑1
           TGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTG                                                                                          <  1:9247759/101‑1
                   TCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGA                                                                                  <  1:4017680/101‑1
                    CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGAT                                                                                 >  1:7575847/1‑101
                     AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATC                                                                                <  1:865579/101‑1
                      AAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCA                                                                               <  1:560223/101‑1
                            GTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGC                                                                         >  1:835665/1‑101
                             TGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCC                                                                        >  1:13031940/1‑101
                             TGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGATGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCC                                                                        >  1:7085509/1‑101
                              GGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCA                                                                       <  1:690667/101‑1
                               GAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGATGTTAATAGATCAGGTTGCCAA                                                                      >  1:10817091/1‑101
                                 GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACT                                                                    <  1:5088756/101‑1
                                   TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTAC                                                                  <  1:3956107/101‑1
                                   TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTAC                                                                  <  1:1347471/101‑1
                                    GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACC                                                                 >  1:10200256/1‑101
                                      ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGA                                                               <  1:7603609/101‑1
                                      ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGA                                                               >  1:3476986/1‑101
                                       TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTcatatg                                                              <  1:11194458/101‑7
                                        GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACA                                                             <  1:11802690/101‑1
                                          CAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAG                                                           <  1:2481183/101‑1
                                          CAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAG                                                           >  1:4677434/1‑101
                                          CAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAG                                                           >  1:432673/1‑101
                                            AAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGT                                                         >  1:9935886/1‑101
                                            AAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGT                                                         <  1:9126019/101‑1
                                             AGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTA                                                        <  1:11866860/101‑1
                                              GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAA                                                       <  1:11434092/101‑1
                                                CATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAAT                                                     <  1:4535606/101‑1
                                                 ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATG                                                    >  1:2004085/1‑101
                                                  TCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGG                                                   <  1:5656573/101‑1
                                                  TCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGG                                                   <  1:9826304/101‑1
                                                   CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGA                                                  >  1:1426184/1‑101
                                                   CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGA                                                  <  1:1404715/101‑1
                                                   CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGA                                                  >  1:4916076/1‑101
                                                    GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACAGACAAGGTAAATGGAA                                                 >  1:9480543/1‑101
                                                     GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAA                                                >  1:10570163/1‑101
                                                          TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAAT                                           <  1:1958033/101‑1
                                                            TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAA                                         >  1:7181/1‑101
                                                              TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGA                                       >  1:2059839/1‑101
                                                               GAACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAA                                      >  1:10023047/1‑101
                                                                AACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAA                                     >  1:12578745/1‑101
                                                                AACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAA                                     <  1:1109361/101‑1
                                                                 ACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAAT                                    <  1:7795334/101‑1
                                                                 ACATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAAT                                    <  1:1669397/101‑1
                                                                  CATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATA                                   >  1:6028164/1‑101
                                                                  CATAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATA                                   <  1:3090141/101‑1
                                                                    TAAAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGG                                 <  1:5707639/101‑1
                                                                      AAACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCA                               <  1:4730293/101‑1
                                                                       AACACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAA                              <  1:6705656/101‑1
                                                                         CACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATC                            <  1:6063421/101‑1
                                                                         CACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATC                            <  1:3825962/101‑1
                                                                         CACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATC                            <  1:10857503/101‑1
                                                                         CACTATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATC                            >  1:1887876/1‑101
                                                                            TATCAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAAT                         >  1:3969888/1‑101
                                                                               CAATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGG                      <  1:680278/101‑1
                                                                                AATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGA                     >  1:6496281/1‑101
                                                                                 ATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAA                    <  1:11627967/101‑1
                                                                                 ATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAA                    <  1:7829655/101‑1
                                                                                 ATAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAA                    >  1:2612577/1‑101
                                                                                  aAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAAT                   >  1:4275480/2‑101
                                                                                  TAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAAT                   >  1:9721757/1‑101
                                                                                  TAAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAAT                   <  1:11512958/101‑1
                                                                                   AAGTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATA                  <  1:9055755/101‑1
                                                                                     GTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACC                >  1:12333132/1‑101
                                                                                     GTTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACC                <  1:11832709/101‑1
                                                                                      TTGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCA               >  1:9850664/1‑101
                                                                                       TGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAATTAGGCAATCAATGGGAATACCAA              >  1:7390754/1‑101
                                                                                       TGGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAA              <  1:7426147/101‑1
                                                                                        GGAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAA             >  1:5204184/1‑101
                                                                                         GAGTCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAA            <  1:12267674/101‑1
                                                                                            TCATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATC         >  1:7955964/1‑101
                                                                                              ATTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATCCC       >  1:1055716/1‑101
                                                                                               TTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATCCCA      <  1:9460752/101‑1
                                                                                               TTACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATCCCA      <  1:10438232/101‑1
                                                                                                TACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATCCCAT     <  1:1265931/101‑1
                                                                                                 ACCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATCCCATT    >  1:12866289/1‑101
                                                                                                  CCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATCCCATTA   >  1:2750247/1‑101
                                                                                                  CCCTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATCCCATTA   <  1:3573443/101‑1
                                                                                                                                                                                                        
ACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_007779/2411557‑2411458
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTACCTGGGTTGTTAATAGATCAGGTTGCCAACTACCGACAAGGTAAATGGAAAGAAATAAGAAATAGGCAATCAATGGGAATACCAAAAATCCCATTAC  <  NC_007779/2985055‑2984956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.