| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,750,122 | Δ1 bp | 95.5% | coding (365/1416 nt) | tnaA ← | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,750,122 | 0 | C→. | 95.5% | 56.2 ‑0.6 ‑2.7 | 269 | coding (365/1416 nt) | tnaA | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| Reads supporting (aligned to +/- strand): new base (132/125): ref base (5/7): total (137/132) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.66e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.96e-03 | ||||||||||
Only 100 of 274 total aligned reads displayed.
GATATAGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCCTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGA > NC_007779/3750022‑3750218 | atatAGACGTTACGCACGGTACAGCTGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATTCAGGct < 1:12257542/101‑2 (MQ=255) tataGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGctt < 1:6725585/101‑3 (MQ=255) ataGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTtt > 1:5476559/1‑101 (MQ=255) aGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTtttt > 1:1727072/1‑101 (MQ=255) gACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTttttc > 1:10191560/1‑100 (MQ=255) gACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTttttc < 1:2989091/101‑2 (MQ=255) gACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCTttttc < 1:9607351/101‑2 (MQ=255) aCGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTcc < 1:8071950/101‑1 (MQ=255) aCGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTcc < 1:3963640/101‑1 (MQ=255) cGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCt < 1:1549652/101‑1 (MQ=255) gTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTg < 1:10779712/101‑1 (MQ=255) ttACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGc < 1:11266300/101‑1 (MQ=255) tACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCt > 1:465886/1‑101 (MQ=255) aCGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTc < 1:612231/101‑1 (MQ=255) cGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTcg < 1:1980070/101‑1 (MQ=255) gCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTcgc > 1:4733637/1‑101 (MQ=255) gCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTcgc > 1:12185518/1‑101 (MQ=255) aCGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑t > 1:7718636/1‑101 (MQ=255) gTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑tttt < 1:3728897/101‑1 (MQ=255) gTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑tttt > 1:1903050/1‑101 (MQ=255) aCAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑tttttt > 1:10288677/1‑101 (MQ=255) gCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAAt < 1:7619488/101‑1 (MQ=255) gCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAAt < 1:5376549/101‑1 (MQ=255) cGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCa < 1:3350092/101‑1 (MQ=255) gTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAg < 1:9420812/101‑1 (MQ=255) gTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAg > 1:11880329/1‑101 (MQ=255) ttGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGt < 1:11262766/101‑1 (MQ=255) ttGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGt > 1:5092733/1‑101 (MQ=255) tGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTa < 1:3237986/101‑1 (MQ=255) aTCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTAcc > 1:8492886/1‑101 (MQ=255) tCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCg < 1:429402/101‑1 (MQ=255) gCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAat < 1:9549734/101‑1 (MQ=255) gCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAat > 1:7018683/1‑101 (MQ=255) tATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAatat < 1:12672388/101‑1 (MQ=255) aTGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAAtata < 1:6326917/101‑1 (MQ=255) gCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGAt > 1:10732470/1‑101 (MQ=255) ccTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGAttt > 1:304607/1‑101 (MQ=255) ccTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGAttt > 1:1404617/1‑101 (MQ=255) cTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTg < 1:9725930/101‑1 (MQ=255) cTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGAATTg > 1:5418888/1‑101 (MQ=255) gTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGctct < 1:4141636/101‑1 (MQ=255) gTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGctct < 1:6872476/101‑1 (MQ=255) gTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGctct > 1:10049398/1‑101 (MQ=255) tGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTg > 1:2538844/1‑101 (MQ=255) tGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTg > 1:3559004/1‑101 (MQ=255) ggTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTgc < 1:6284538/101‑1 (MQ=255) gTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTgcg < 1:2255658/101‑1 (MQ=255) gTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTgcg < 1:4520326/101‑1 (MQ=255) tATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCTGAATATAGATTTGCTCTgcgc > 1:8345298/1‑101 (MQ=255) aTCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTgcgca > 1:10090608/1‑100 (MQ=255) aTCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGcc < 1:7433555/101‑1 (MQ=255) aTCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGcc < 1:9981246/101‑1 (MQ=255) aTCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGcc > 1:3636248/1‑101 (MQ=255) tCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCa < 1:12488116/101‑1 (MQ=255) tCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATCTGCTCTGCGCCa > 1:1667529/1‑101 (MQ=255) cAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCAc > 1:11668388/1‑101 (MQ=255) cAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCAc > 1:7491122/1‑101 (MQ=255) aaaGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACg < 1:3747494/101‑1 (MQ=255) aaGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCGTTTTTTTAATCAGTGCCGGAATATAGATTTGCTCTGCGCCACg < 1:6571492/101‑1 (MQ=255) aGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGTGCCACGGc > 1:5722683/1‑101 (MQ=255) aGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGc > 1:5958125/1‑101 (MQ=255) aGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGc > 1:10437965/1‑101 (MQ=255) aaTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCt < 1:1108717/101‑1 (MQ=255) aaTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCt > 1:2579368/1‑101 (MQ=255) aaTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCt < 1:8225140/101‑1 (MQ=255) aTAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTg > 1:6961156/1‑101 (MQ=255) gTTAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTg < 1:2567793/101‑1 (MQ=255) ttAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGa < 1:5261527/101‑1 (MQ=255) ttAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGa < 1:1511807/101‑1 (MQ=255) tAGAGAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAg > 1:8925941/1‑101 (MQ=255) agagAACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGt > 1:1203745/1‑101 (MQ=255) gagaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTc > 1:8753908/1‑101 (MQ=255) gagaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTc > 1:2086591/1‑101 (MQ=255) gagaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTc < 1:6004081/101‑1 (MQ=255) agaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCg < 1:5172180/101‑1 (MQ=255) agaACGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCg > 1:12311348/1‑101 (MQ=255) cGCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAAt < 1:10354793/101‑1 (MQ=255) gCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATg > 1:11393156/1‑101 (MQ=255) gCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATg < 1:9904099/101‑1 (MQ=255) gCCACCATTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGGGAGTCGGAATg > 1:8569076/1‑101 (MQ=255) ccaccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATgg > 1:9187157/1‑101 (MQ=255) ccaccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATgg > 1:7209181/1‑101 (MQ=255) caccaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgt > 1:797127/1‑101 (MQ=255) accaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtg > 1:12458065/1‑101 (MQ=255) accaTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGgtg < 1:10690245/101‑1 (MQ=255) aTTTTGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTAt < 1:11597959/101‑1 (MQ=255) ttttGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTAtt > 1:10581530/1‑101 (MQ=255) tttGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTg > 1:4033872/1‑101 (MQ=255) ttGCTGCGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGa > 1:2892180/1‑101 (MQ=255) gctgcGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTTATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATa > 1:7106268/1‑101 (MQ=255) ctgcGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATaa > 1:312704/1‑101 (MQ=255) tgcGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAAc > 1:7955939/1‑101 (MQ=255) cGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCa > 1:2752038/1‑101 (MQ=255) cGATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCa > 1:5361093/1‑101 (MQ=255) gATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaa < 1:7244125/101‑1 (MQ=255) gATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaa < 1:12717755/101‑1 (MQ=255) gATCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCaa > 1:4975699/1‑101 (MQ=255) tCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAg > 1:7763567/1‑101 (MQ=255) tCCAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAg > 1:5054240/1‑101 (MQ=255) ccAGG‑CTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGa < 1:3902603/101‑1 (MQ=255) | GATATAGACGTTACGCACGGTACAGCCGTTGATCTGGCTATGGCCCTGCGTGGTATCAAAGAAATAGTTAGAGAACGCCACCATTTTGCTGCGATCCAGGCCTTTTTCCTGCTCGCG‑TTTTTTAATCAGTACCGGAATATAGATTTGCTCTGCGCCACGGCCCTGGTGAGTCGGAATGGTGTATTGATAACCAAAGA > NC_007779/3750022‑3750218 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |