BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 274373	NA (NA)	504 (1.990)	164/180	NT	9.0%	intergenic (‑32/‑176)	insH/mmuP	IS5 transposase and trans‑activator/S‑methylmethionine transporter
*	?	NC_007779	679094 =	5104 (20.160)	504 (1.990)	164/180	NT	9.0%	coding (1258/1428 nt)	djlB	chaperone

Only 100 of 6597 total aligned reads displayed.

GCAGGCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGCAT  >  NC_007779/678994‑679194

 cAGGCCTGCCAACCAACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGattatt                                                                                                     <  1:9002147/101‑1 (MQ=255)

  aGGCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGAttatta                                                                                                    >  1:1184149/1‑101 (MQ=255)

   ggCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTaa                                                                                                   >  1:185433/1‑101 (MQ=255)

     ccTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAAtt                                                                                                 >  1:10211669/1‑101 (MQ=255)

     ccTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAAtt                                                                                                 <  1:6469534/101‑1 (MQ=255)

       tGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCa                                                                                               >  1:9799601/1‑101 (MQ=255)

        gCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATTCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAg                                                                                              <  1:12824871/101‑1 (MQ=255)

         ccAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAgg                                                                                             >  1:11127039/1‑101 (MQ=255)

          cAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAggc                                                                                            <  1:5023418/101‑1 (MQ=255)

          cAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAggc                                                                                            >  1:3098291/1‑101 (MQ=255)

           aaCCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAggcg                                                                                           <  1:5348675/101‑1 (MQ=255)

             ccTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAggcggc                                                                                         <  1:8909674/101‑1 (MQ=255)

             ccTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAggcggc                                                                                         >  1:1632198/1‑101 (MQ=255)

             ccTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAggcggc                                                                                         <  1:8439026/101‑1 (MQ=255)

                 cAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAAt                                                                                     <  1:4907042/101‑1 (MQ=255)

                  agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTCAGGCGGCGAAtt                                                                                    <  1:3939046‑M2/19‑1 (MQ=255)

                  agaagaATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAAtt                                                                                    >  1:3590138/1‑101 (MQ=255)

                  agaagaATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAAtt                                                                                    >  1:11607688/1‑101 (MQ=255)

                   gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTCAGGCGGCGAAttt                                                                                   >  1:24824‑M2/82‑101 (MQ=255)

                   gaagaaTCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAAttt                                                                                   >  1:369043/1‑101 (MQ=255)

                    aagaaTCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAAtttt                                                                                  >  1:2855175/1‑101 (MQ=255)

                    aagaaTCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAAtttt                                                                                  <  1:1504402/101‑1 (MQ=255)

                     agaaTCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTa                                                                                 >  1:2604484/1‑101 (MQ=255)

                      gaaTCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTAc                                                                                <  1:10766279/101‑1 (MQ=255)

                        tgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTCAGGCGGCGAATTTTACCg                                                                              >  1:11014278‑M2/77‑101 (MQ=255)

                         tCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCga                                                                             <  1:6236114/101‑1 (MQ=255)

                         gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTCAGGCGGCGAATTTTACCga                                                                             >  1:12180550‑M2/76‑101 (MQ=255)

                          cATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCgag                                                                            <  1:3820134/101‑1 (MQ=255)

                           aTTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCgaga                                                                           <  1:4408159/101‑1 (MQ=255)

                            ttAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGaa                                                                          <  1:4666714/101‑1 (MQ=255)

                              aaTGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGc                                                                        >  1:6702596/1‑101 (MQ=255)

                              aaTGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGc                                                                        <  1:10548794/101‑1 (MQ=255)

                              aaTGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGc                                                                        <  1:5745596/101‑1 (MQ=255)

                              aaTGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGc                                                                        <  1:3216351/101‑1 (MQ=255)

                               aTGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCa                                                                       <  1:12699966/101‑1 (MQ=255)

                                tGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCaa                                                                      >  1:1743957/1‑101 (MQ=255)

                                  ccGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAAc                                                                    >  1:4289977/1‑101 (MQ=255)

                                   cGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACt                                                                   <  1:2232549/101‑1 (MQ=255)

                                    gATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTg                                                                  <  1:2085882/101‑1 (MQ=255)

                                     aTTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGt                                                                 >  1:3447698/1‑101 (MQ=255)

                                      ttGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGtt                                                                >  1:7222736/1‑101 (MQ=255)

                                        gtgAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGa                                                              <  1:6360389/101‑1 (MQ=255)

                                         tgAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGaa                                                             <  1:7735239/101‑1 (MQ=255)

                                              cgccTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGa                                                        <  1:11215283/101‑1 (MQ=255)

                                               gccTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAg                                                       >  1:7097246/1‑101 (MQ=255)

                                                ccTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGc                                                      <  1:2979218/101‑1 (MQ=255)

                                                ccTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGc                                                      >  1:10000874/1‑101 (MQ=255)

                                                 cTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGcc                                                     <  1:1151980/101‑1 (MQ=255)

                                                      tGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAAc                                                >  1:10308904/1‑101 (MQ=255)

                                                      tGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAAc                                                >  1:7850444/1‑101 (MQ=255)

                                                       gCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAAcc                                               >  1:4772963/1‑101 (MQ=255)

                                                       agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAAcc                                               <  1:1140827‑M2/56‑1 (MQ=255)

                                                        cAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCg                                              <  1:4039888/101‑1 (MQ=255)

                                                         aGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGc                                             >  1:9572819/1‑101 (MQ=255)

                                                         aGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGc                                             >  1:9230690/1‑101 (MQ=255)

                                                          gAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAAACGGAGCCGCAACCGCa                                            <  1:12273655/101‑1 (MQ=255)

                                                            aaaTCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGc                                          >  1:8558672/1‑101 (MQ=255)

                                                             caaacatgatctcatatcagggacttgttcgcaccttccTTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGcc                                         >  1:2725746‑M2/40‑101 (MQ=255)

                                                             aaTCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGcc                                         >  1:6586043/1‑101 (MQ=255)

                                                               tCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCaa                                       <  1:7314504/101‑1 (MQ=255)

                                                               tCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCaa                                       <  1:5138526/101‑1 (MQ=255)

                                                               aacatgatctcatatcagggacttgttcgcaccttccTTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCaa                                       >  1:9092774‑M2/38‑101 (MQ=255)

                                                                cGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAAt                                      <  1:5619024/101‑1 (MQ=255)

                                                                 gTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGACAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATg                                     >  1:8681031/1‑101 (MQ=255)

                                                                    gTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGccc                                  >  1:5990194/1‑101 (MQ=255)

                                                                      tctcatatcagggacttgttcgcaccttccTTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGt                                >  1:11324436‑M2/31‑101 (MQ=255)

                                                                        aCTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTg                              >  1:5238629/1‑101 (MQ=255)

                                                                          tGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGAc                            >  1:12596547/1‑101 (MQ=255)

                                                                              aGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGAtg                        <  1:6950570/101‑1 (MQ=255)

                                                                               gCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGAtgg                       >  1:8774809/1‑101 (MQ=255)

                                                                                cATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGAtggt                      >  1:1393640/1‑101 (MQ=255)

                                                                                cATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGAtggt                      <  1:10427671/101‑1 (MQ=255)

                                                                                 attaattaTTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGAtggtg                     >  1:5872670/1‑101 (MQ=255)

                                                                                 attaattaTTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGAtggtg                     >  1:12377890/1‑101 (MQ=255)

                                                                                  ttaattaTTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGAtggtgg                    >  1:8219404/1‑101 (MQ=255)

                                                                                  ttaattaTTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGAtggtgg                    >  1:9458829/1‑101 (MQ=255)

                                                                                  ttaattaTTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGAtggtgg                    >  1:9908405/1‑101 (MQ=255)

                                                                                      ttattCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCa                <  1:4160941/101‑1 (MQ=255)

                                                                                       tattCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAg               >  1:8314316/1‑101 (MQ=255)

                                                                                        attCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAgg              >  1:11722208/1‑101 (MQ=255)

                                                                                         ttCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGc             >  1:12064267/1‑101 (MQ=255)

                                                                                         ttCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGc             >  1:12492345/1‑101 (MQ=255)

                                                                                          tcgtcgATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCt            >  1:10891123/1‑101 (MQ=255)

                                                                                          cgcaccttccTTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCt            <  1:334478‑M2/91‑1 (MQ=255)

                                                                                            gtcgATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGt          <  1:8101283/101‑1 (MQ=255)

                                                                                            gtcgATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGt          >  1:2348780/1‑101 (MQ=255)

                                                                                             tcgATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTc         >  1:11956455/1‑101 (MQ=255)

                                                                                             tcgATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTc         >  1:1960328/1‑101 (MQ=255)

                                                                                              cgATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCt        <  1:10106279/101‑1 (MQ=255)

                                                                                              ccttccTTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCt        >  1:10653763‑M2/7‑101 (MQ=255)

                                                                                               gATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTg       <  1:4523000/101‑1 (MQ=255)

                                                                                                attattAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTgg      <  1:7971012/101‑1 (MQ=255)

                                                                                                 ttattaATTCAGGGGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTggg     <  1:7418930/101‑1 (MQ=255)

                                                                                                 ttattaATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTggg     >  1:9337092/1‑101 (MQ=255)

                                                                                                 tccTTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTggg     <  1:7637233‑M2/98‑1 (MQ=255)

                                                                                                   attaATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGca   <  1:6125621/101‑1 (MQ=255)

                                                                                                   attaATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGca   >  1:6824374/1‑101 (MQ=255)

                                                                                                   attaATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGca   <  1:7507009/101‑1 (MQ=255)

                                                                                                    ttaATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGcat  <  1:5467724/101‑1 (MQ=255)

                                                                                                    ttaATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGcat  <  1:9689381/101‑1 (MQ=255)

GCAGGCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGCAT  >  NC_007779/678994‑679194

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.