BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	1980091 =	0 (0.000)	130 (0.510)	82/180	NT	100%	intergenic (‑171/+264)	flhD/insH	DNA‑binding transcriptional dual regulator/IS5 element protein
*	?	NC_007779	1980209 =	NA (NA)	130 (0.510)	82/180	NT	100%	intergenic (‑289/+146)	flhD/insH	DNA‑binding transcriptional dual regulator/IS5 element protein

Only 100 of 198 total aligned reads displayed.

CGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAA  >  NC_007779/1980109‑1980304

cGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaag                                                                                                  >  1:9257041/1‑101 (MQ=255)

cGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaag                                                                                                  >  1:2708941/1‑101 (MQ=255)

 gACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaagg                                                                                                 >  1:64173/1‑101 (MQ=255)

 gACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaagg                                                                                                 <  1:11695364/101‑1 (MQ=255)

  aCGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaagga                                                                                                <  1:9205859/101‑1 (MQ=255)

  aCGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaagga                                                                                                >  1:6740709/1‑101 (MQ=255)

  aCGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaagga                                                                                                <  1:3786696/101‑1 (MQ=255)

   cGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaaggaa                                                                                               <  1:7183292/101‑1 (MQ=255)

   cGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTaaggaa                                                                                               <  1:3693163/101‑1 (MQ=255)

      aaCTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGt                                                                                            <  1:5965053/101‑1 (MQ=255)

      aaCTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGt                                                                                            <  1:10970606/101‑1 (MQ=255)

       aCTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTg                                                                                           >  1:9920681/1‑101 (MQ=255)

       aCTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTg                                                                                           <  1:2377684/101‑1 (MQ=255)

        cTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGc                                                                                          <  1:6927117/101‑1 (MQ=255)

        cTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGc                                                                                          <  1:3965105/101‑1 (MQ=255)

         tGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCg                                                                                         >  1:10016017/1‑101 (MQ=255)

         tGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCg                                                                                         >  1:11270210/1‑101 (MQ=255)

          gTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGa                                                                                        <  1:3917674/101‑1 (MQ=255)

           tACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGaa                                                                                       >  1:246527/1‑101 (MQ=255)

           tACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGaa                                                                                       >  1:664813/1‑101 (MQ=255)

           tACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGaa                                                                                       <  1:9873136/101‑1 (MQ=255)

             cTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATa                                                                                     <  1:7615798/101‑1 (MQ=255)

             cTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATa                                                                                     <  1:3896442/101‑1 (MQ=255)

              tCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATaa                                                                                    >  1:4241780/1‑101 (MQ=255)

                 tCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑Cg                                                                                >  1:8038944/1‑101 (MQ=255)

                  cACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑Cgg                                                                               >  1:3055334/1‑101 (MQ=255)

                      acacGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGaa                                                                           >  1:9571443/1‑101 (MQ=255)

                       cacGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTTCTTAAGGAAGGTGCGAATAAG‑CGGGGaaa                                                                          <  1:2652655/101‑1 (MQ=255)

                         cGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAAtt                                                                        >  1:8113619/1‑101 (MQ=255)

                          gCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAAttc                                                                       >  1:1026748/1‑101 (MQ=255)

                          gCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAAttc                                                                       >  1:6916802/1‑101 (MQ=255)

                            acaTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAAttctt                                                                     >  1:8700261/1‑101 (MQ=255)

                            acaTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAAttctt                                                                     >  1:5466358/1‑101 (MQ=255)

                             caTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAAttcttc                                                                    <  1:1058666/101‑1 (MQ=255)

                             caTACAACGGAGGGGGGCTACGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTCCTTAAGGAAGGTGCGAATAAG‑CGGGGAAAttcttc                                                                    <  1:1656919/101‑1 (MQ=255)

                               tACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTAAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTtctc                                                                  <  1:4792904/101‑1 (MQ=255)

                                aCAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCg                                                                 >  1:4640804/1‑101 (MQ=255)

                                  aaCGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGc                                                               >  1:4823/1‑101 (MQ=255)

                                    cGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTg                                                             >  1:9735990/1‑101 (MQ=255)

                                     ggAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGa                                                            >  1:8217703/1‑101 (MQ=255)

                                      gAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGAc                                                           <  1:5308505/101‑1 (MQ=255)

                                       aGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACt                                                          >  1:345520/1‑101 (MQ=255)

                                         gggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCa                                                        >  1:11462641/1‑101 (MQ=255)

                                          gggtCTGCGATTTTCAATAATGCGTGAGGCAGAGCACACAAACCACACAATGACGTAAGGAAGTTAAAAATAAG‑AGGGGAAATTCTTCTCGGCTGACTCAg                                                       <  1:8136763/101‑1 (MQ=21)

                                            ggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtc                                                     >  1:2940100/1‑101 (MQ=255)

                                              cTGCGATTTTCAATAATGCGTGATGCAGATCGCACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcat                                                   >  1:10043934/1‑101 (MQ=255)

                                               tGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcatt                                                  <  1:1303601/101‑1 (MQ=255)

                                               tGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcatt                                                  >  1:9107774/1‑101 (MQ=255)

                                                gCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcattt                                                 >  1:3347085/1‑101 (MQ=255)

                                                gCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcattt                                                 >  1:12288777/1‑101 (MQ=255)

                                                 cGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcatttc                                                >  1:10927275/1‑101 (MQ=255)

                                                 cGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcatttc                                                >  1:4468086/1‑101 (MQ=255)

                                                  gATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcatttca                                               >  1:1871963/1‑101 (MQ=255)

                                                  gATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcatttca                                               >  1:511794/1‑101 (MQ=255)

                                                  gATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcatttca                                               >  1:2764938/1‑101 (MQ=255)

                                                  gATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcatttca                                               >  1:3276413/1‑101 (MQ=255)

                                                   aTTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcatttcat                                              >  1:11007046/1‑101 (MQ=255)

                                                   aTTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcatttcat                                              >  1:12426253/1‑101 (MQ=255)

                                                   aTTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcatttcat                                              >  1:4922414/1‑101 (MQ=255)

                                                   aTTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcatttcat                                              >  1:6098317/1‑101 (MQ=255)

                                                    ttttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcatttcatt                                             >  1:4347020/1‑101 (MQ=255)

                                                    ttttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGtcatttcatt                                             >  1:10906726/1‑101 (MQ=255)

                                                      ttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCatttcatttc                                           >  1:1606139/1‑101 (MQ=255)

                                                      ttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCatttcatttc                                           >  1:3416880/1‑101 (MQ=255)

                                                       tCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATttct                                          >  1:818705/1‑101 (MQ=255)

                                                           taatGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAt                                      >  1:8412829/1‑101 (MQ=255)

                                                           taatGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAt                                      >  1:4358561/1‑101 (MQ=255)

                                                             atGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGt                                    >  1:9474119/1‑101 (MQ=255)

                                                             atGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGt                                    >  1:5395295/1‑101 (MQ=255)

                                                             atGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGt                                    >  1:6264961/1‑101 (MQ=255)

                                                             atGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGt                                    >  1:1824409/1‑101 (MQ=255)

                                                             atGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGt                                    >  1:1710294/1‑101 (MQ=255)

                                                              tGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGtt                                   >  1:10226233/1‑101 (MQ=255)

                                                              tGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCAAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGtt                                   <  1:9684706/101‑1 (MQ=255)

                                                               gCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGttt                                  >  1:7059729/1‑101 (MQ=255)

                                                                cGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTg                                 >  1:7469132/1‑101 (MQ=255)

                                                                 gTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGa                                >  1:5819029/1‑101 (MQ=255)

                                                                   gATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGc                              >  1:8478788/1‑101 (MQ=255)

                                                                    aTGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGcc                             >  1:11119488/1‑101 (MQ=255)

                                                                     tGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCg                            >  1:8779054/1‑101 (MQ=255)

                                                                      gCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGa                           >  1:7386389/1‑101 (MQ=255)

                                                                       cAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAt                          >  1:11872016/1‑101 (MQ=255)

                                                                       cAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAt                          >  1:7263113/1‑101 (MQ=255)

                                                                        aGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCGTCATGTTTGAGCCGAtt                         >  1:11196265/1‑101 (MQ=255)

                                                                         gATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttt                        >  1:12660372/1‑101 (MQ=255)

                                                                         gATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttt                        <  1:6031897/101‑1 (MQ=255)

                                                                               acaAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtctc                  >  1:10742215/1‑101 (MQ=255)

                                                                                 aaaaCACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTccc                >  1:1369215/1‑101 (MQ=255)

                                                                                 aaaaCACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTccc                >  1:5148712/1‑101 (MQ=255)

                                                                                   aaCACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGt              >  1:4389981/1‑101 (MQ=255)

                                                                                    acacaaaaTTAATTAAAGAAGGTGAAAAAAAGCCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGt              <  1:223251/95‑1 (MQ=11)

                                                                                     cacTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaa            >  1:12110956/1‑101 (MQ=40)

                                                                                      acTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaaa           >  1:10350434/1‑101 (MQ=40)

                                                                                        tCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATg         >  1:4158635/1‑101 (MQ=38)

                                                                                         cAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGc        >  1:10442729/1‑101 (MQ=37)

                                                                                         cAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGc        >  1:1085076/1‑101 (MQ=37)

                                                                                         cAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGc        >  1:7847748/1‑101 (MQ=37)

                                                                                            ttACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCtt     >  1:5998666/1‑101 (MQ=33)

                                                                                            ttACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCtt     >  1:11928029/1‑101 (MQ=33)

                                                                                               cTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGaa  >  1:6429399/1‑101 (MQ=11)

CGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAGGAAGGTGCGAATAAG‑CGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAA  >  NC_007779/1980109‑1980304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.