New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 3746911 =NA (NA)232 (0.920) 123/180 NT 100% intergenic (‑509/‑68) mdtL/insH multidrug efflux system protein/IS5 element protein
?NC_007779 = 3748646 0 (0.000)intergenic (+687/+425) insH/tnaA IS5 element protein/tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent

Only 100 of 654 total aligned reads displayed.

CGAACTTAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGATTAAAT  >  NC_007779/3748546‑3748745
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attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                     >  1:2231953‑M2/98‑101 (MQ=255)
attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                     <  1:2299369‑M2/4‑1 (MQ=255)
attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                     <  1:2623801‑M2/4‑1 (MQ=255)
attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                     >  1:640496‑M2/98‑101 (MQ=255)
attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                     <  1:6456308‑M2/4‑1 (MQ=255)
attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                     <  1:11325732‑M2/4‑1 (MQ=255)
attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                     <  1:7149578‑M2/4‑1 (MQ=255)
attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                     >  1:7510126‑M2/98‑101 (MQ=255)
attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                     >  1:9781264‑M2/98‑101 (MQ=255)
attcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                     <  1:810805‑M2/4‑1 (MQ=255)
 gAACTTAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAg                                                                                                    >  1:7273503‑M2/1‑100 (MQ=255)
  aaCTTAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAgg                                                                                                   <  1:4096705‑M2/101‑3 (MQ=255)
   caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGa                                                                                                  >  1:2809157‑M2/95‑101 (MQ=255)
     aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATc                                                                                                <  1:8684004‑M2/9‑1 (MQ=255)
     aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATc                                                                                                >  1:7975923‑M2/93‑101 (MQ=255)
       aaCCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggt                                                                                              >  1:11797469‑M2/1‑94 (MQ=255)
        aCCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtg                                                                                             >  1:1317346‑M2/1‑93 (MQ=255)
         ccACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgc                                                                                            >  1:10197355‑M2/1‑92 (MQ=255)
             acgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCAtt                                                                                        <  1:1051082‑M2/17‑1 (MQ=255)
              cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTa                                                                                       >  1:9060075‑M2/84‑101 (MQ=255)
              cgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTa                                                                                       <  1:1388747‑M2/18‑1 (MQ=255)
               gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAg                                                                                      <  1:921821‑M2/19‑1 (MQ=255)
                aCGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaag                                                                                     >  1:10441902‑M2/1‑85 (MQ=255)
                 cGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagt                                                                                    <  1:5204078‑M2/101‑18 (MQ=255)
                  gCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtc                                                                                   <  1:3305794‑M2/101‑19 (MQ=255)
                   gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCaga                                                                                  >  1:7015478‑M2/79‑101 (MQ=255)
                    aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCagag                                                                                 >  1:3433400‑M2/78‑101 (MQ=255)
                      aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGat                                                                               >  1:11689621‑M2/76‑101 (MQ=255)
                       cAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctga                                                                              >  1:5934648‑M2/1‑78 (MQ=255)
                       cAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctga                                                                              <  1:10001790‑M2/101‑24 (MQ=255)
                        aaCGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgat                                                                             <  1:11870480‑M2/101‑25 (MQ=255)
                        aaCGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgat                                                                             <  1:9719296‑M2/101‑25 (MQ=255)
                         atcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGAtata                                                                            <  1:5819821‑M2/29‑1 (MQ=255)
                         aCGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgata                                                                            >  1:5736490‑M2/1‑76 (MQ=255)
                          tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAg                                                                           >  1:11087430‑M2/72‑101 (MQ=255)
                          cGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatat                                                                           <  1:10621528‑M2/101‑27 (MQ=255)
                             gctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCa                                                                        >  1:5391886‑M2/69‑101 (MQ=255)
                              ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCAt                                                                       >  1:12758129‑M2/68‑101 (MQ=255)
                                 ggCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatca                                                                    >  1:7739440‑M2/1‑68 (MQ=255)
                                   acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTg                                                                  <  1:3744862‑M2/39‑1 (MQ=255)
                                   acatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTg                                                                  <  1:1952439‑M2/39‑1 (MQ=255)
                                     atgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAg                                                                >  1:12305941‑M2/61‑101 (MQ=255)
                                      tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAgg                                                               >  1:8959115‑M2/60‑101 (MQ=255)
                                      tgCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                               >  1:3899225‑M2/1‑63 (MQ=255)
                                        aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGat                                                             >  1:8323019‑M2/58‑101 (MQ=255)
                                        aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGat                                                             <  1:6847456‑M2/44‑1 (MQ=255)
                                          gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGatat                                                           >  1:6270885‑M2/56‑101 (MQ=255)
                                           aTCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat                                                          <  1:6086425‑M2/101‑44 (MQ=255)
                                            aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATATGTGAGGATATag                                                         >  1:10360835‑M2/54‑101 (MQ=255)
                                             cccGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct                                                        <  1:4344705‑M2/101‑46 (MQ=255)
                                                gACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga                                                     >  1:741810‑M2/1‑53 (MQ=255)
                                                aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGaa                                                     <  1:2025176‑M2/52‑1 (MQ=255)
                                                aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGaa                                                     <  1:4889838‑M2/52‑1 (MQ=255)
                                                aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGaa                                                     >  1:7596470‑M2/50‑101 (MQ=255)
                                                 aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAAc                                                    <  1:1198474‑M2/53‑1 (MQ=255)
                                                 aCAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag                                                    >  1:2994843‑M2/1‑52 (MQ=255)
                                                     tACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat                                                <  1:3352816‑M2/101‑54 (MQ=255)
                                                     actgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAg                                                <  1:12544144‑M2/57‑1 (MQ=255)
                                                      ctgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAgg                                               >  1:4712307‑M2/44‑101 (MQ=255)
                                                       tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGc                                              <  1:1476313‑M2/59‑1 (MQ=255)
                                                       tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGc                                              <  1:5275524‑M2/59‑1 (MQ=255)
                                                        gagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCa                                             >  1:496798‑M2/42‑101 (MQ=255)
                                                         agtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCaa                                            >  1:3686856‑M2/41‑101 (MQ=255)
                                                         agtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCaa                                            >  1:952180‑M2/41‑101 (MQ=255)
                                                         agtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCaa                                            <  1:1245547‑M2/61‑1 (MQ=255)
                                                          gtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAAc                                           >  1:8419505‑M2/40‑101 (MQ=255)
                                                            aTTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacag                                         >  1:10887768‑M2/1‑41 (MQ=255)
                                                             ttAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                        >  1:4577966‑M2/1‑40 (MQ=255)
                                                             agccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGt                                        >  1:12061592‑M2/37‑101 (MQ=255)
                                                                 cGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc                                    <  1:8217075‑M2/101‑66 (MQ=255)
                                                                 cGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc                                    <  1:10100481‑M2/101‑66 (MQ=255)
                                                                  gTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca                                   >  1:11607585‑M2/1‑35 (MQ=255)
                                                                   tGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat                                  >  1:1573495‑M2/1‑34 (MQ=255)
                                                                      gaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCt                               <  1:6716808‑M2/74‑1 (MQ=255)
                                                                      gaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCt                               <  1:1686996‑M2/74‑1 (MQ=255)
                                                                           tccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATaa                          <  1:1896880‑M2/79‑1 (MQ=255)
                                                                            aaaTTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca                         <  1:3555349‑M2/101‑77 (MQ=255)
                                                                                tCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa                     <  1:8556866‑M2/101‑81 (MQ=255)
                                                                                 tatTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac                    <  1:5489333‑M2/100‑82 (MQ=255)
                                                                                 cATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac                    <  1:5970901‑M2/101‑82 (MQ=255)
                                                                                  ttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCa                   >  1:114270‑M2/16‑101 (MQ=255)
                                                                                  ttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCa                   >  1:1772563‑M2/16‑101 (MQ=255)
                                                                                  aTTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact                   >  1:5642209‑M2/1‑19 (MQ=255)
                                                                                   ttGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt                  >  1:8833711‑M2/1‑18 (MQ=255)
                                                                                   ttGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt                  <  1:10264459‑M2/101‑84 (MQ=255)
                                                                                   ttGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt                  >  1:9415980‑M2/1‑18 (MQ=255)
                                                                                    tGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta                 <  1:4198518‑M2/101‑85 (MQ=255)
                                                                                    attcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAgg                 >  1:4474233‑M2/14‑101 (MQ=255)
                                                                                       tatCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct              >  1:10755534‑M2/1‑14 (MQ=255)
                                                                                        atCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt             <  1:2484679‑M2/101‑89 (MQ=255)
                                                                                         tCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc            >  1:11237010‑M2/1‑12 (MQ=255)
                                                                                         tCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagagcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc            >  1:2085725‑M2/1‑12 (MQ=255)
                                                                                          cGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg           <  1:4640232‑M2/101‑91 (MQ=255)
                                                                                          accttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTAc           >  1:11002638‑M2/8‑101 (MQ=255)
                                                                                          accttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTAc           >  1:4788052‑M2/8‑101 (MQ=255)
                                                                                            cttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCg         >  1:12636632‑M2/6‑101 (MQ=255)
                                                                                              tCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga       >  1:3158947‑M2/1‑7 (MQ=255)
                                                                                               cACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac      >  1:9942721‑M2/1‑6 (MQ=255)
                                                                                                aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca     <  1:7330511‑M2/101‑97 (MQ=255)
                                                                                                   aaTGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGATTAAAt  <  1:6628741/101‑1 (MQ=255)
                                                                                                    |                                                                                                   
CGAACTTAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGATTAAAT  >  NC_007779/3748546‑3748745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.