New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 3988379NA (NA)218 (0.870) 110/180 NT 100% coding (746/783 nt) yhiS hypothetical protein
?NC_007779 4009199 = 0 (0.000)coding (1375/1623 nt) yhiJ hypothetical protein

Only 100 of 234 total aligned reads displayed.

TACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_007779/3988295‑3988379
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAAC  >  NC_007779/4009199‑4009298
                                                                                                                                                                                         
TACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAG                                                                                      <  1:7606840/101‑1
     GAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTT                                                                                 <  1:966446/101‑1
      AGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTG                                                                                >  1:457299/1‑101
            AATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATA                                                                          <  1:8646669/101‑1
             ATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAA                                                                         >  1:4368167/1‑101
             ATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAA                                                                         <  1:2654304/101‑1
               CGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACG                                                                       <  1:4703258/101‑1
                GGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGG                                                                      <  1:9251949/101‑1
                GGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGG                                                                      <  1:3057710/101‑1
                 GCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGA                                                                     >  1:8173329/1‑101
                 GCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGA                                                                     <  1:7835348/101‑1
                  CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAA                                                                    <  1:2095102/101‑1
                   TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAA                                                                   >  1:3438129/1‑101
                     AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATG                                                                 >  1:12172954/1‑101
                     AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATG                                                                 >  1:10030939/1‑101
                      AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGG                                                                <  1:12530616/101‑1
                       ACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGT                                                               <  1:2631843/101‑1
                       ACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGT                                                               >  1:10124031/1‑101
                        CATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTG                                                              >  1:6937244/1‑101
                          TGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGA                                                            >  1:6064001/1‑101
                          TGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGA                                                            >  1:84153/1‑101
                          TGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGA                                                            >  1:2571737/1‑101
                           GAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAA                                                           >  1:11350646/1‑101
                           GAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAA                                                           >  1:2024138/1‑101
                           GAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAA                                                           <  1:1072291/101‑1
                           GAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAA                                                           >  1:802077/1‑101
                            AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAG                                                          <  1:7862338/101‑1
                             AGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGA                                                         >  1:7254482/1‑101
                              GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAG                                                        <  1:11121446/101‑1
                              GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAG                                                        <  1:3994368/101‑1
                              GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAG                                                        >  1:5513037/1‑101
                              GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAG                                                        <  1:12835358/101‑1
                                 ATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAAC                                                     >  1:3413990/1‑101
                                   GAAATGACTGAGTTAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGC                                                   >  1:8786686/1‑101
                                   GAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGC                                                   <  1:7139877/101‑1
                                    AAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCA                                                  <  1:5343880/101‑1
                                    AAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCA                                                  <  1:795355/101‑1
                                      ATGACTGAGTCAGCCGAGAGGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATA                                                <  1:834070/101‑1
                                      ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATA                                                <  1:312687/101‑1
                                       TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAG                                               <  1:11508086/101‑1
                                       TGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAG                                               >  1:4990767/1‑101
                                        GACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGG                                              >  1:4136969/1‑101
                                         ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGC                                             <  1:5445419/101‑1
                                         ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGC                                             <  1:7036489/101‑1
                                         ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGC                                             >  1:2724122/1‑101
                                         ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGC                                             <  1:6444440/101‑1
                                          CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCG                                            >  1:12341317/1‑101
                                           TGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGA                                           >  1:5931184/1‑101
                                           TGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGA                                           >  1:6870527/1‑101
                                           TGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGA                                           <  1:7276772/101‑1
                                            GAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAA                                          >  1:1837743/1‑101
                                             AGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAA                                         <  1:892020/101‑1
                                              GTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAAC                                        <  1:4469099/101‑1
                                                CAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGG                                      <  1:9156009/101‑1
                                                 AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGG                                     >  1:7412911/1‑101
                                                 AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGG                                     <  1:5691377/101‑1
                                                   CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGA                                   <  1:11016701/101‑1
                                                    tGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGAC                                  >  1:5308939/2‑101
                                                    CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGAC                                  >  1:1638242/1‑101
                                                     GAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACA                                 >  1:5837868/1‑101
                                                     GAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACA                                 <  1:540310/101‑1
                                                        AAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTT                              <  1:8467/101‑1
                                                        AAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTT                              >  1:11422546/1‑101
                                                        AAGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTT                              <  1:6573425/101‑1
                                                         AGAATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTT                             >  1:9043801/1‑101
                                                           AATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTA                           <  1:4412827/101‑1
                                                           AATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTA                           <  1:6739401/101‑1
                                                           AATTTCCCCGCTTATTCGCACCTTCCTTAGATATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTA                           <  1:3635821/101‑1
                                                            ATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAG                          <  1:1392088/101‑1
                                                            ATTTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAG                          >  1:8535160/1‑101
                                                              TTCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGT                        >  1:2276561/1‑101
                                                               TCCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTC                       <  1:2950651/101‑1
                                                                CCCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCT                      <  1:5145302/101‑1
                                                                 CCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTT                     <  1:1680355/101‑1
                                                                 CCCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTT                     <  1:7698702/101‑1
                                                                  CCGCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTA                    <  1:3670939/101‑1
                                                                    GCTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAAC                  >  1:10089974/1‑101
                                                                     CTTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACG                 >  1:10437845/1‑101
                                                                      TTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGC                >  1:12718775/1‑101
                                                                      TTATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGC                >  1:11659929/1‑101
                                                                        ATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCC              <  1:2482524/101‑1
                                                                        ATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCC              >  1:4837132/1‑101
                                                                        ATTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCC              <  1:4518429/101‑1
                                                                         TTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCG             >  1:8260100/1‑101
                                                                         TTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCG             >  1:5464554/1‑101
                                                                         TTCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCG             >  1:8720891/1‑101
                                                                          TCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGT            <  1:893806/101‑1
                                                                          TCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGT            <  1:12032000/101‑1
                                                                          TCGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGT            >  1:6725968/1‑101
                                                                           CGCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTG           >  1:2387244/1‑101
                                                                            GCACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGA          >  1:6140831/1‑101
                                                                             CACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGAC         >  1:1541025/1‑101
                                                                              ACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACA        <  1:9884015/101‑1
                                                                              ACCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACA        <  1:3232766/101‑1
                                                                               CCTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAG       >  1:1124701/1‑101
                                                                                CTTCCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGT      <  1:5604079/101‑1
                                                                                  TCCTTAGGCATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAA    >  1:9330097/1‑101
                                                                                   CCTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAA   >  1:12231141/1‑101
                                                                                    CTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAAC  >  1:3800223/1‑101
                                                                                    CTTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAAC  >  1:4177558/1‑101
                                                                                                                                                                                         
TACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_007779/3988295‑3988379
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGGTATAAATCAAGTTGTTGCACATAACGGAAATGGTGGAAGAGAACGCATAGGCGAAACGGGGACAGTTTTAGGTCTTAACGCCCGTGACAGTAAAC  >  NC_007779/4009199‑4009298

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.