New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 43103620 (0.000)228 (0.950) 117/172 NT 100% intergenic (‑286/‑69) yjcS/insH alkyl sulfatase/IS5 element protein
?NC_007779 4311562 = 0 (0.000)coding (916/1029 nt) alsK D‑allose kinase

Only 100 of 270 total aligned reads displayed.

TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGC  >  NC_007779/4311463‑4311662
                                                                                                   |                                                                                                    
atatgagtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagca                                                                                                     >  1:1932272‑M2/100‑101 (MQ=255)
 tatgagtcgttttatgtgtttattatatatattgtacctgtcgtttgcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagcac                                                                                                    >  1:3267210‑M2/99‑101 (MQ=255)
  atgagtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagcaca                                                                                                   >  1:3728034‑M2/98‑101 (MQ=255)
  atgagtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagcaca                                                                                                   <  1:10758496‑M2/4‑1 (MQ=255)
   tgagtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAg                                                                                                  >  1:10161523‑M2/97‑101 (MQ=255)
    gagtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGa                                                                                                 >  1:3179308‑M2/96‑101 (MQ=255)
    gagtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGa                                                                                                 <  1:7906321‑M2/6‑1 (MQ=255)
     agtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGaa                                                                                                <  1:2620135‑M2/7‑1 (MQ=255)
     agtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGaa                                                                                                >  1:411723‑M2/95‑101 (MQ=255)
     agtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGaa                                                                                                <  1:17560‑M2/7‑1 (MQ=255)
     agtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGaa                                                                                                <  1:5446641‑M2/7‑1 (MQ=255)
      gtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAAc                                                                                               >  1:9449035‑M2/94‑101 (MQ=255)
      gtcgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAAc                                                                                               <  1:8365936‑M2/8‑1 (MQ=255)
        cgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACtg                                                                                             >  1:1800036‑M2/92‑101 (MQ=255)
        cgttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACtg                                                                                             >  1:11985264‑M2/92‑101 (MQ=255)
          ttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACtgtg                                                                                           >  1:1354768‑M2/90‑101 (MQ=255)
          ttttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACtgtg                                                                                           >  1:12219531‑M2/90‑101 (MQ=255)
           tttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTgg                                                                                          <  1:937603‑M2/13‑1 (MQ=255)
           tttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTgg                                                                                          >  1:6090003‑M2/89‑101 (MQ=255)
           tttatgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTgg                                                                                          >  1:2469562‑M2/89‑101 (MQ=255)
               tgtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCaaa                                                                                      >  1:238148‑M2/85‑101 (MQ=255)
                gtgtttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcctggggctttagCACAGAACTGTGGCaaaa                                                                                     >  1:2244394‑M2/84‑101 (MQ=255)
                   tttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAAc                                                                                  <  1:12459449‑M2/21‑1 (MQ=255)
                   tttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAAc                                                                                  <  1:6474706‑M2/21‑1 (MQ=255)
                   tttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAAc                                                                                  <  1:9088826‑M2/21‑1 (MQ=255)
                    ttattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACg                                                                                 <  1:6408919‑M2/22‑1 (MQ=255)
                     tattatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGt                                                                                >  1:69492‑M2/79‑101 (MQ=255)
                       ttatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTg                                                                              >  1:12302217‑M2/77‑101 (MQ=255)
                       ttatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTg                                                                              <  1:4191905‑M2/25‑1 (MQ=255)
                        tatatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGa                                                                             >  1:5111701‑M2/76‑101 (MQ=255)
                         atatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGAt                                                                            >  1:2502003‑M2/75‑101 (MQ=255)
                         atatatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGAt                                                                            <  1:8936819‑M2/27‑1 (MQ=255)
                           atatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATgc                                                                          >  1:5902106‑M2/73‑101 (MQ=255)
                           atatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATgc                                                                          >  1:1125271‑M2/73‑101 (MQ=255)
                            tatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATgcg                                                                         >  1:931387‑M2/72‑101 (MQ=255)
                            tatattgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATgcg                                                                         >  1:11084569‑M2/72‑101 (MQ=255)
                               attgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCa                                                                      >  1:7239901‑M2/69‑101 (MQ=255)
                                 tgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAat                                                                    <  1:7404781‑M2/35‑1 (MQ=255)
                                 tgtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAat                                                                    >  1:2785866‑M2/67‑101 (MQ=255)
                                  gtacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAata                                                                   >  1:140032‑M2/66‑101 (MQ=255)
                                   tacctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAatat                                                                  <  1:9746819‑M2/37‑1 (MQ=255)
                                    acctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATAtt                                                                 <  1:4468136‑M2/38‑1 (MQ=255)
                                    acctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATAtt                                                                 <  1:11742949‑M2/38‑1 (MQ=255)
                                    acctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATAtt                                                                 >  1:2302577‑M2/64‑101 (MQ=255)
                                    acctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATAtt                                                                 >  1:11567824‑M2/64‑101 (MQ=255)
                                    acctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATAtt                                                                 <  1:8130558‑M2/38‑1 (MQ=255)
                                    acctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATAtt                                                                 <  1:403293‑M2/38‑1 (MQ=255)
                                     cctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATtg                                                                >  1:7523104‑M2/63‑101 (MQ=255)
                                      ctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATtgc                                                               >  1:77658‑M2/62‑101 (MQ=255)
                                      ctgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATtgc                                                               >  1:12425168‑M2/62‑101 (MQ=255)
                                       tgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATtgct                                                              >  1:3750239‑M2/61‑101 (MQ=255)
                                       tgtcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATtgct                                                              <  1:7060730‑M2/41‑1 (MQ=255)
                                         tcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATtgctgc                                                            >  1:8602191‑M2/59‑101 (MQ=255)
                                         tcgttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATtgctgc                                                            >  1:12806726‑M2/59‑101 (MQ=255)
                                           gttggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCAc                                                          >  1:7896557‑M2/57‑101 (MQ=255)
                                             tggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTTCTGCAccc                                                        >  1:12753877‑M2/55‑101 (MQ=255)
                                              ggcacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCt                                                       <  1:12573348‑M2/48‑1 (MQ=255)
                                                cacagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGa                                                     <  1:5659269‑M2/50‑1 (MQ=255)
                                                 acagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAGTATTGCTGCACCCTGAg                                                    <  1:10720617‑M2/51‑1 (MQ=255)
                                                 acagcgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAg                                                    <  1:9003642‑M2/51‑1 (MQ=255)
                                                     cgggacattgcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGcc                                                <  1:3896278‑M2/55‑1 (MQ=255)
                                                            ttgcgctactgtgccaacgttttactcatggggctttagCCCAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAg                                         >  1:6082735‑M2/40‑101 (MQ=255)
                                                              gcgctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTc                                       <  1:682465‑M2/64‑1 (MQ=255)
                                                                 ctactgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCaga                                    <  1:200148‑M2/67‑1 (MQ=255)
                                                                   actgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCagaag                                  >  1:11671986‑M2/33‑101 (MQ=255)
                                                                   actgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCagaag                                  <  1:8845489‑M2/69‑1 (MQ=255)
                                                                    ctgtgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCagaaga                                 >  1:6364227‑M2/32‑101 (MQ=255)
                                                                       tgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGa                              >  1:3665238‑M2/29‑101 (MQ=255)
                                                                       tgccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGa                              <  1:5361062‑M2/73‑1 (MQ=255)
                                                                        gccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAg                             <  1:11009269‑M2/74‑1 (MQ=255)
                                                                        gccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATCAg                             >  1:11301009‑M2/28‑101 (MQ=255)
                                                                         ccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAgg                            >  1:3958081‑M2/27‑101 (MQ=255)
                                                                         ccaacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAgg                            <  1:11504574‑M2/75‑1 (MQ=255)
                                                                          caacgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAggc                           >  1:3347352‑M2/26‑101 (MQ=255)
                                                                             cgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGaggcggt                        <  1:4372261‑M2/79‑2 (MQ=255)
                                                                             cgttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAggcggc                        >  1:6335830‑M2/23‑101 (MQ=255)
                                                                              gttttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCa                       <  1:1610949‑M2/80‑1 (MQ=255)
                                                                                 ttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATa                    >  1:11935279‑M2/19‑101 (MQ=255)
                                                                                 ttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATa                    >  1:297770‑M2/19‑101 (MQ=255)
                                                                                 ttactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATa                    <  1:3526317‑M2/83‑1 (MQ=255)
                                                                                  tactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATaa                   >  1:7292905‑M2/18‑101 (MQ=255)
                                                                                  tactcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATaa                   <  1:2917869‑M2/84‑1 (MQ=255)
                                                                                   actcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATaaa                  >  1:6161970‑M2/17‑101 (MQ=255)
                                                                                   actcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATaaa                  >  1:192526‑M2/17‑101 (MQ=255)
                                                                                   actcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATaaa                  <  1:5224183‑M2/85‑1 (MQ=255)
                                                                                    ctcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAg                 >  1:10562519‑M2/16‑101 (MQ=255)
                                                                                    ctcatggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAg                 >  1:8231077‑M2/16‑101 (MQ=255)
                                                                                       atggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAgcgc              >  1:4997937‑M2/13‑101 (MQ=255)
                                                                                         ggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCAc            <  1:6509092‑M2/91‑1 (MQ=255)
                                                                                         ggggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCAc            <  1:5507002‑M2/91‑1 (MQ=255)
                                                                                          gggctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACg           <  1:10309447‑M2/92‑1 (MQ=255)
                                                                                            gctttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGAc         >  1:9653844‑M2/8‑101 (MQ=255)
                                                                                             ttttAGCACAGAACTGGGGCAAAAACCGTTGATGCGCAAATATTGCTGCCCCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGAAAAAAAGCGCACGCcc        <  1:6264930/99‑1 (MQ=255)
                                                                                               ttagCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTg      <  1:760958‑M2/97‑1 (MQ=255)
                                                                                                 agCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGAt    <  1:883143‑M2/99‑1 (MQ=255)
                                                                                                  gCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATg   >  1:1142700‑M2/2‑101 (MQ=255)
                                                                                                   cacaGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGc  >  1:8311846/1‑101 (MQ=255)
                                                                                                   cacaGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGc  <  1:5833163/101‑1 (MQ=255)
                                                                                                   cacaGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGc  >  1:10811816/1‑101 (MQ=255)
                                                                                                   cacaGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGc  >  1:12087768/1‑101 (MQ=255)
                                                                                                   |                                                                                                    
TCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGC  >  NC_007779/4311463‑4311662

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.