BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 274373	NA (NA)	8 (0.040)	8/180	NT	0.35%	intergenic (‑32/‑176)	insH/mmuP	IS5 transposase and trans‑activator/S‑methylmethionine transporter
*	?	NC_007779	679094 =	2256 (11.340)	8 (0.040)	8/180	NT	0.35%	coding (1258/1428 nt)	djlB	chaperone

Only 100 of 2684 total aligned reads displayed.

GCAGGCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGCAT  >  NC_007779/678994‑679194

gCAGGCCTGCCAACCTACAGAAGAATCATTAATGCGGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGattat                                                                                                      <  1:6524064/101‑1 (MQ=255)

gCAGGCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGattat                                                                                                      >  1:4625936/1‑101 (MQ=255)

gCAGGCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGattat                                                                                                      <  1:3647399/101‑1 (MQ=255)

gCAGGCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGattat                                                                                                      <  1:2350726/101‑1 (MQ=255)

 cAGGCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGattatt                                                                                                     <  1:5263793/101‑1 (MQ=255)

 cAGGCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGattatt                                                                                                     <  1:871685/101‑1 (MQ=255)

 cAGGCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGattatt                                                                                                     <  1:8320185/101‑1 (MQ=255)

  aGGCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGAttatta                                                                                                    >  1:3181819/1‑101 (MQ=255)

  aGGCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGAttatta                                                                                                    >  1:8503178/1‑101 (MQ=255)

   ggCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTaa                                                                                                   >  1:7056217/1‑101 (MQ=255)

    gCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAAt                                                                                                  <  1:7549748/101‑1 (MQ=255)

     ccTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAAtt                                                                                                 <  1:352560/101‑1 (MQ=255)

      cTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCGCTGGAAGCATTAATTATTCGTCGATTATTAATTc                                                                                                <  1:5925217/101‑1 (MQ=255)

       tGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCa                                                                                               <  1:8631716/101‑1 (MQ=255)

        gCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAg                                                                                              <  1:6115514/101‑1 (MQ=255)

         ccAACCTACAGAAGAATGATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAgg                                                                                             <  1:1633812/101‑1 (MQ=255)

            aCCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAggcgg                                                                                          <  1:9439839/101‑1 (MQ=255)

            aCCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAggcgg                                                                                          <  1:778285/101‑1 (MQ=255)

             ccTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAggcggc                                                                                         <  1:3266040/101‑1 (MQ=255)

              cTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGgcggcg                                                                                        >  1:3074722/1‑101 (MQ=255)

              cTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGgcggcg                                                                                        >  1:5657855/1‑101 (MQ=255)

                aCAGAGGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGaa                                                                                      >  1:5978183/1‑101 (MQ=255)

                 cAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAAt                                                                                     <  1:5075789/101‑1 (MQ=255)

                  agaagaATCATTAATGCCGATTGTGAGTCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAAtt                                                                                    >  1:3346914/1‑101 (MQ=255)

                  agaagaATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAAtt                                                                                    <  1:9646056/101‑1 (MQ=255)

                   gaagaaTCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGTGGCGAAttt                                                                                   >  1:6418480/1‑101 (MQ=255)

                   gaagaaTCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAAttt                                                                                   >  1:2568503/1‑101 (MQ=255)

                     agaaTCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTa                                                                                 <  1:684087/101‑1 (MQ=255)

                      gaaTCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTAc                                                                                >  1:823483/1‑101 (MQ=255)

                      gaaTCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTAc                                                                                <  1:6055119/101‑1 (MQ=255)

                       aaTCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTAcc                                                                               >  1:4904676/1‑101 (MQ=255)

                       aaTCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTAcc                                                                               <  1:437907/101‑1 (MQ=255)

                        aTCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCg                                                                              <  1:7863238/101‑1 (MQ=255)

                          cATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCgag                                                                            >  1:1122295/1‑101 (MQ=255)

                            ttAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGaa                                                                          <  1:6916496/101‑1 (MQ=255)

                            ttAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGaa                                                                          <  1:2187352/101‑1 (MQ=255)

                            ttAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGaa                                                                          >  1:6364541/1‑101 (MQ=255)

                            ttAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGaa                                                                          <  1:5594220/101‑1 (MQ=255)

                              aaTGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGc                                                                        >  1:9824549/1‑101 (MQ=255)

                               aTGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCa                                                                       <  1:1316837/101‑1 (MQ=255)

                               aTGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCa                                                                       <  1:1418593/101‑1 (MQ=255)

                                  ccGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAAc                                                                    <  1:9544249/101‑1 (MQ=255)

                                   cGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACt                                                                   <  1:8149474/101‑1 (MQ=255)

                                   cGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACt                                                                   >  1:7457208/1‑101 (MQ=255)

                                    gATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTg                                                                  >  1:6211187/1‑101 (MQ=255)

                                    gATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTg                                                                  <  1:10000147/101‑1 (MQ=255)

                                       tgtgAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTg                                                               <  1:1688229/101‑1 (MQ=255)

                                       tgtgAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTg                                                               >  1:1209141/1‑101 (MQ=255)

                                        gtgAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGa                                                              <  1:2977576/101‑1 (MQ=255)

                                          gAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAAc                                                            <  1:518493/101‑1 (MQ=255)

                                          gAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAAc                                                            <  1:8067453/101‑1 (MQ=255)

                                           aGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAAcc                                                           <  1:5858985/101‑1 (MQ=255)

                                             ccgccTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCgg                                                         <  1:9001718/101‑1 (MQ=255)

                                              cgccTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGa                                                        <  1:9074377/101‑1 (MQ=255)

                                               gccTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAg                                                       >  1:8893460/1‑101 (MQ=255)

                                                 cTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGcc                                                     >  1:9379846/1‑101 (MQ=255)

                                                    gATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCa                                                  <  1:2661405/101‑1 (MQ=255)

                                                    gATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCa                                                  <  1:8417691/101‑1 (MQ=255)

                                                              aTCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCa                                        <  1:4547547/101‑1 (MQ=255)

                                                              aTCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCa                                        <  1:1975699/101‑1 (MQ=255)

                                                               tCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCaa                                       <  1:9197746/101‑1 (MQ=255)

                                                                 gTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATg                                     <  1:3896278/101‑1 (MQ=255)

                                                                   tGTCCAGTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGcc                                   >  1:7963430/1‑101 (MQ=255)

                                                                    gTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGccc                                  >  1:4690837/1‑101 (MQ=255)

                                                                    gTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGccc                                  >  1:1554167/1‑101 (MQ=255)

                                                                     tCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCg                                 >  1:7699073/1‑101 (MQ=255)

                                                                         cTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGa                             >  1:6639796/1‑101 (MQ=255)

                                                                         cTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGa                             >  1:5414326/1‑101 (MQ=255)

                                                                          tGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAAACGCAGCCAATGCCCGTTGAc                            >  1:4459999/1‑101 (MQ=255)

                                                                          tGGAAGCATTAATTATTCGTCGATTATGAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGAc                            <  1:414060/101‑1 (MQ=255)

                                                                           ggAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACg                           >  1:5510695/1‑101 (MQ=255)

                                                                           ggAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACg                           >  1:4985697/1‑101 (MQ=255)

                                                                             aaGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGAt                         >  1:1020897/1‑101 (MQ=255)

                                                                             aaGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGAt                         >  1:2898504/1‑101 (MQ=255)

                                                                               gCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGAtgg                       >  1:5350812/1‑101 (MQ=255)

                                                                                cATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGAtggt                      <  1:3781640/101‑1 (MQ=255)

                                                                                  ttaattaTTCGTCGATTATTAATTCAGGCGGCGAA‑TTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTggg                   <  1:2442782/101‑1 (MQ=255)

                                                                                   taattaTTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTggg                   <  1:4267704/101‑1 (MQ=255)

                                                                                   taattaTTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTggg                   <  1:930414/101‑1 (MQ=255)

                                                                                   taattaTTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTggg                   <  1:3455026/101‑1 (MQ=255)

                                                                                     attattCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGcc                 <  1:9719178/101‑1 (MQ=255)

                                                                                     attattCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCCTTGACGATGGTGGGcc                 >  1:407241/1‑101 (MQ=255)

                                                                                       tattCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAg               <  1:8802217/101‑1 (MQ=255)

                                                                                       tattCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAg               >  1:3993220/1‑101 (MQ=255)

                                                                                          tcgtcgATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCt            <  1:4192794/101‑1 (MQ=255)

                                                                                          tcgtcgATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCt            <  1:7324082/101‑1 (MQ=255)

                                                                                          tcgtcgATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCt            >  1:7131693/1‑101 (MQ=255)

                                                                                            gtcgATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGt          <  1:6283057/101‑1 (MQ=255)

                                                                                            gtcgATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGt          >  1:1847330/1‑101 (MQ=255)

                                                                                             gcgATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTc         <  1:283575/100‑1 (MQ=255)

                                                                                              cgATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCt        <  1:7606078/101‑1 (MQ=255)

                                                                                               gATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTg       <  1:2743774/101‑1 (MQ=255)

                                                                                               gATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTg       <  1:5761538/101‑1 (MQ=255)

                                                                                                attattAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTgg      <  1:483070/101‑1 (MQ=255)

                                                                                                  tattaATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAGCCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGc    <  1:9902282/101‑1 (MQ=255)

                                                                                                  tattaATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGc    >  1:6998351/1‑101 (MQ=255)

                                                                                                  tattaATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGc    <  1:2112723/101‑1 (MQ=255)

                                                                                                   attaATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGca   >  1:1482670/1‑101 (MQ=255)

                                                                                                   attaATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAACGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGca   >  1:7225436/1‑101 (MQ=255)

                                                                                                    ttaATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGcat  <  1:6761365/101‑1 (MQ=255)

GCAGGCCTGCCAACCTACAGAAGAATCATTAATGCCGATTGTGAGCCGCCTTGATGCAGAAAATCGTTGTCCACTGGAAGCATTAATTATTCGTCGATTATTAATTCAGGCGGCGAATTTTACCGAGAAGCAAACTGTTGAACCGGAGCCGCAACCGCAGCCAATGCCCGTTGACGATGGTGGGCCAGGCTGTCTGGGCAT  >  NC_007779/678994‑679194

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.