Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 1,496,775 Δ1 bp 100% coding (11/924 nt) ydcI ← DNA‑binding transcriptional regulator

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077791,496,7750T→.100.0% 1262.4 261coding (11/924 nt)ydcIDNA‑binding transcriptional regulator
Reads supporting (aligned to +/- strand):  new base (125/136):  ref base (0/0):  total (125/136)

Only 100 of 293 total aligned reads displayed.

CAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTAACAATTA  >  NC_007779/1496675‑1496871
                                                                                                    |                                                                                                
cAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAt                                                                                                  >  1:10691974/1‑101 (MQ=255)
cAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGCGGCGCAAACGGATGCGCTGACTAAACAGACTAt                                                                                                  >  1:10138742/1‑101 (MQ=255)
 aaaTTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGGTGTGCGGCAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAtt                                                                                                 >  1:211912/1‑101 (MQ=255)
  aaTTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAttt                                                                                                >  1:10049985/1‑101 (MQ=255)
  aaTTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAttt                                                                                                >  1:8001347/1‑101 (MQ=255)
   aTTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAtttt                                                                                               >  1:4341593/1‑101 (MQ=255)
   aTTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAtttt                                                                                               >  1:2621368/1‑101 (MQ=255)
    ttAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAttttt                                                                                              <  1:4715447/101‑1 (MQ=255)
    ttAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAttttt                                                                                              <  1:9219664/101‑1 (MQ=255)
     tAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAtttttt                                                                                             <  1:14247494/101‑1 (MQ=255)
      aaGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAttttttc                                                                                            >  1:14089657/1‑100 (MQ=255)
       aGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAttttttcc                                                                                           >  1:8260139/1‑99 (MQ=255)
       aGGGTTTCAGCCGCGCGCCCCAAAGTTCCGTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAttttttcc                                                                                           <  1:6817572/101‑3 (MQ=255)
        gggTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCTCAAACGGATGCGCTGACTAAACAGACTAttttttcca                                                                                          <  1:5670806/101‑4 (MQ=255)
         ggTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTAttttttccat                                                                                         <  1:12834956/101‑5 (MQ=255)
            ttCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAg                                                                                     <  1:12691151/101‑1 (MQ=255)
               aGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGa                                                                                  >  1:13995813/1‑101 (MQ=255)
                gCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGAt                                                                                 <  1:5961809/101‑1 (MQ=255)
                  cgcgcgCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGt                                                                               >  1:5936801/1‑101 (MQ=255)
                   gcgcgcCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGtt                                                                              >  1:2501731/1‑101 (MQ=255)
                    cgcgcCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTa                                                                             >  1:2256168/1‑101 (MQ=255)
                    cgcgcCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTa                                                                             <  1:2856150/101‑1 (MQ=255)
                       gcCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTaaaa                                                                          >  1:6536316/1‑101 (MQ=255)
                       gcCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTaaaa                                                                          <  1:14182735/101‑1 (MQ=255)
                       gcCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTaaaa                                                                          <  1:9593280/101‑1 (MQ=255)
                         cccAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAAc                                                                        <  1:1659175/101‑1 (MQ=255)
                         cccAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAAc                                                                        <  1:13573668/101‑1 (MQ=255)
                          ccAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACg                                                                       >  1:13869622/1‑101 (MQ=255)
                                ttCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCgg                                                                 >  1:4478898/1‑101 (MQ=255)
                                  ccTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGgtg                                                               <  1:12540054/101‑1 (MQ=255)
                                   cTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGgtgt                                                              >  1:7638938/1‑101 (MQ=255)
                                   cTTGATGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGgtgt                                                              >  1:11145496/1‑101 (MQ=255)
                                    ttgttgTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTc                                                             >  1:10220849/1‑101 (MQ=255)
                                    ttgttgTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTc                                                             <  1:13486849/101‑1 (MQ=255)
                                    ttgttgTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTc                                                             <  1:12363609/101‑1 (MQ=255)
                                     tgttgtGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCg                                                            >  1:2335569/1‑101 (MQ=255)
                                      gttgtGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGc                                                           <  1:1864357/101‑1 (MQ=255)
                                       ttgtGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCt                                                          <  1:10843104/101‑1 (MQ=255)
                                       ttgtGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCt                                                          <  1:3239735/101‑1 (MQ=255)
                                            cGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACaa                                                     <  1:6684653/101‑1 (MQ=255)
                                            cGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACaa                                                     >  1:5760875/1‑101 (MQ=255)
                                             gACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAg                                                    >  1:3743413/1‑101 (MQ=255)
                                             gACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAg                                                    <  1:13680166/101‑1 (MQ=255)
                                             gACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAg                                                    <  1:2736030/101‑1 (MQ=255)
                                              aCAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGt                                                   >  1:13206250/1‑101 (MQ=255)
                                              aCAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGt                                                   <  1:11077183/101‑1 (MQ=255)
                                              aCAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGt                                                   <  1:6449792/101‑1 (MQ=255)
                                               cAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTg                                                  >  1:5600447/1‑101 (MQ=255)
                                               cAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTg                                                  <  1:11277335/101‑1 (MQ=255)
                                                aGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGa                                                 <  1:13783779/101‑1 (MQ=255)
                                                 gCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGaa                                                >  1:13291717/1‑101 (MQ=255)
                                                   tACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAgt                                              >  1:8727277/1‑101 (MQ=255)
                                                   tACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAgt                                              >  1:8607185/1‑101 (MQ=255)
                                                      gAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAgttgt                                           <  1:4963199/101‑1 (MQ=255)
                                                      gAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAgttgt                                           >  1:4384636/1‑101 (MQ=255)
                                                        aTGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGttt                                         <  1:6111610/101‑1 (MQ=255)
                                                         tGTATGAAGGTGGCGCAAACGGATGCGGTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTg                                        <  1:7538187/101‑1 (MQ=255)
                                                         tGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTg                                        <  1:10003440/101‑1 (MQ=255)
                                                         tGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTg                                        <  1:355421/101‑1 (MQ=255)
                                                           tATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGAt                                      >  1:2178116/1‑101 (MQ=255)
                                                            aTGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGAtt                                     >  1:1823486/1‑101 (MQ=255)
                                                             tGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTa                                    <  1:8375095/101‑1 (MQ=255)
                                                              gAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTAt                                   >  1:5388390/1‑101 (MQ=255)
                                                              gAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTAt                                   <  1:3892374/101‑1 (MQ=255)
                                                               aaGGTGGCGCAAACGGATGCGCTGACTAAACTGACTATTTTTTCCACAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATg                                  <  1:12932199/101‑1 (MQ=255)
                                                               aaGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATg                                  >  1:12153703/1‑101 (MQ=255)
                                                                aGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGa                                 <  1:14377776/101‑1 (MQ=255)
                                                                 ggTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGAt                                <  1:7320538/101‑1 (MQ=255)
                                                                 ggTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGCTGTCGCTGACAAGTGAAGTTGTTTGATTATGAt                                <  1:11770691/101‑1 (MQ=255)
                                                                      cgcAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACtt                           <  1:1835891/101‑1 (MQ=255)
                                                                      cgcAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACtt                           <  1:13133843/101‑1 (MQ=255)
                                                                      cgcAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACtt                           <  1:7113328/101‑1 (MQ=255)
                                                                       gcAAACGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTg                          <  1:11452557/101‑1 (MQ=255)
                                                                          aaCGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGAtt                       <  1:4848542/101‑1 (MQ=255)
                                                                          aaCGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGAtt                       <  1:9062610/101‑1 (MQ=255)
                                                                          aaCGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGGGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGAtt                       <  1:917725/101‑1 (MQ=255)
                                                                           aCGGATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTg                      <  1:6042811/101‑1 (MQ=255)
                                                                             ggATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCa                    <  1:13725703/101‑1 (MQ=255)
                                                                              gATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCaa                   >  1:7916406/1‑101 (MQ=255)
                                                                              gATGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCaa                   <  1:2922644/101‑1 (MQ=255)
                                                                                tGCGCTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCaaaa                 <  1:5140032/101‑1 (MQ=255)
                                                                                  cgcTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAata               >  1:13349908/1‑101 (MQ=255)
                                                                                  cgcTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAata               >  1:3355392/1‑101 (MQ=255)
                                                                                   gcTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAatat              >  1:12264589/1‑101 (MQ=255)
                                                                                   gcTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAatat              >  1:12574512/1‑101 (MQ=255)
                                                                                   gcTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAatat              <  1:7267818/101‑1 (MQ=255)
                                                                                   gcTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAatat              >  1:6938138/1‑101 (MQ=255)
                                                                                    cTGACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAAtatt             >  1:8947736/1‑101 (MQ=255)
                                                                                      gACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAAtattat           <  1:9646641/101‑1 (MQ=255)
                                                                                      gACTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAAtattat           >  1:9942307/1‑101 (MQ=255)
                                                                                       aCTAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATattatt          <  1:10438936/101‑1 (MQ=255)
                                                                                         tAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCGAAATATTATTaa        >  1:11955123/1‑101 (MQ=255)
                                                                                         tAAACAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTaa        >  1:4048291/1‑101 (MQ=255)
                                                                                          taaCAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTAAc       <  1:5858144/100‑1 (MQ=255)
                                                                                          aaaCAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTAAc       <  1:8161133/101‑1 (MQ=255)
                                                                                            aCAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTAACaa     >  1:1473253/1‑101 (MQ=255)
                                                                                             cAGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTAACAAt    >  1:11683527/1‑101 (MQ=255)
                                                                                              aGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTAACAAtt   >  1:7848862/1‑101 (MQ=255)
                                                                                              aGACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTAACAAtt   <  1:5073252/101‑1 (MQ=255)
                                                                                               gACTATTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTAACAATTa  >  1:340844/1‑101 (MQ=255)
                                                                                                    |                                                                                                
CAAATTAAGGGTTTCAGCCGCGCGCCCCAAAGTTCCTTGTTGTGCGACAGCTACGAATGTATGAAGGTGGCGCAAACGGATGCGCTGACTAAACAGACTATTTTTTTCCATAAGCGATGTTAAAAACGAAGCGGTGTCGCTGACAAGTGAAGTTGTTTGATTATGATAACTTGATTGCAAAATATTATTAACAATTA  >  NC_007779/1496675‑1496871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.