| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | 1397758 = | NA (NA) | 207 (0.730) | 111/180 | NT | 100% | intergenic (‑122/‑32) | ynaI/insH | inner membrane protein/IS5 transposase and trans‑activator |
| ? | NC_007779 | 1672777 = | 0 (0.000) | intergenic (+111/‑313) | ynfM/asr | transporter/acid shock‑inducible periplasmic protein | |||||
Only 100 of 474 total aligned reads displayed.
CGGACTGCGGTAAATACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACTGCTTTGTAAGTAGTAA > NC_007779/1672677‑1672877 | cGGACTGCGGTAAATACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTc > 1:10108683/1‑101 (MQ=255) gCGGTAAATACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGgga > 1:13819893‑M1/1‑98 (MQ=255) gCGGTAAATACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGgga < 1:12800893‑M1/101‑4 (MQ=255) ggTAAATACCCGTCCGGACTTATTACCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaag > 1:8264882‑M1/1‑96 (MQ=255) gTAAATACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaagg > 1:11121026‑M1/1‑95 (MQ=255) aaaTACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtg > 1:12703722‑M1/1‑93 (MQ=255) aTACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcg > 1:7941915‑M1/1‑91 (MQ=255) taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGAtt < 1:1021396‑M2/17‑1 (MQ=255) taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGAtt < 1:6323278‑M2/17‑1 (MQ=255) cccGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaat < 1:12570324‑M1/101‑14 (MQ=255) ccGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaata > 1:1946407‑M1/1‑87 (MQ=255) gTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataag > 1:11425182‑M1/1‑85 (MQ=255) ccGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcg < 1:3576501‑M1/101‑19 (MQ=255) ccGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcg < 1:8092098‑M1/101‑19 (MQ=255) gaagactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGt > 1:11166389‑M2/79‑101 (MQ=255) cGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcgg < 1:3899446‑M1/101‑20 (MQ=255) cGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcgg < 1:10675089‑M1/101‑20 (MQ=255) gACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcgggg > 1:4816329‑M1/1‑80 (MQ=255) gACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcgggg > 1:5468099‑M1/1‑80 (MQ=255) gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTAcc > 1:9610949‑M2/76‑101 (MQ=255) cTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaa > 1:5764493‑M1/1‑78 (MQ=255) actcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTAccc < 1:9205170‑M2/27‑1 (MQ=255) ctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCa < 1:3102569‑M2/28‑1 (MQ=255) tATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaat < 1:2179052‑M1/101‑26 (MQ=255) catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCaaa > 1:2742162‑M2/72‑101 (MQ=255) aTTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGGGAGTCTAGggaaggtgcgaataagcggggaaatt > 1:5335137‑M1/1‑75 (MQ=255) tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATa > 1:14488742‑M2/70‑101 (MQ=255) tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATa > 1:8990532‑M2/70‑101 (MQ=255) tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATa < 1:12456298‑M2/32‑1 (MQ=255) gCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattctt < 1:11347659‑M1/101‑30 (MQ=255) atgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATaaa < 1:13432746‑M2/34‑1 (MQ=255) tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAAc < 1:8793722‑M2/35‑1 (MQ=255) gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACg > 1:10455953‑M2/66‑101 (MQ=255) aGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctc > 1:46851‑M1/1‑69 (MQ=255) gCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcg < 1:6553016‑M1/101‑34 (MQ=255) gCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcg < 1:10891829‑M1/101‑34 (MQ=255) cTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCGGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcgg > 1:8457322‑M1/1‑67 (MQ=255) ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGAt < 1:7529853‑M2/39‑1 (MQ=255) cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGAtt > 1:7095068‑M2/62‑101 (MQ=255) tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcacctgccCTAGCGTCATCAGGATTATAAGTACCCAAATAGACGGATTCa > 1:13168311‑M2/60‑101 (MQ=255) ccAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgaat < 1:4920401‑M1/101‑41 (MQ=255) ctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCAtttt < 1:14059597‑M2/46‑1 (MQ=255) tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTg < 1:12313553‑M2/47‑1 (MQ=255) tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCt < 1:4996248‑M2/49‑1 (MQ=255) ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCtg < 1:11881802‑M2/50‑1 (MQ=255) tAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat > 1:6155404‑M1/1‑54 (MQ=255) ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCtgtg > 1:7818870‑M2/50‑101 (MQ=255) aaTAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt > 1:4716326‑M1/1‑53 (MQ=255) aaTAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGgcaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt > 1:10374009‑M1/1‑53 (MQ=255) tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCtgtgt < 1:10271719‑M2/53‑1 (MQ=255) cagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTgtgtgt < 1:12014664‑M2/55‑1 (MQ=255) cagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTgtgtgt > 1:3981810‑M2/47‑101 (MQ=255) cagatgacaaacatgatctcatatcagggacttgttcgcacctcccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTgtgtgt > 1:4425043‑M2/47‑101 (MQ=255) gCCATNCTAAAATNGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcan < 1:11656238‑M1/101‑53 (MQ=255) gCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggttgactcagtcatttcat < 1:8526770‑M1/101‑53 (MQ=255) ccATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatt < 1:13032194‑M1/101‑54 (MQ=255) cATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt < 1:4234363‑M1/101‑55 (MQ=255) cATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt > 1:1725531‑M1/1‑47 (MQ=255) cATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcattt > 1:8666540‑M1/1‑47 (MQ=255) atgacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCAt > 1:9686142‑M2/44‑101 (MQ=255) tCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct < 1:14255838‑M1/101‑57 (MQ=255) gacaaacatgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCAttt < 1:7666515‑M2/60‑1 (MQ=255) ccTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt > 1:9113747‑M1/1‑44 (MQ=255) tAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttca > 1:9754379‑M1/1‑42 (MQ=255) aaaTAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg < 1:9520724‑M1/101‑62 (MQ=255) aaaTAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg > 1:7745095‑M1/1‑40 (MQ=255) catgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACt > 1:2651258‑M2/36‑101 (MQ=255) atgatctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTg > 1:7303707‑M2/35‑101 (MQ=255) tAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt > 1:13680966‑M1/1‑37 (MQ=255) aGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttg < 1:10986204‑M1/101‑66 (MQ=255) gACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga > 1:11956711‑M1/1‑35 (MQ=255) atctcatatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATg > 1:9913625‑M2/32‑101 (MQ=255) aCGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag < 1:10550270‑M1/101‑68 (MQ=255) tatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGt < 1:2283004‑M2/76‑1 (MQ=255) tatcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGt > 1:4519633‑M2/26‑101 (MQ=255) gcgcCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgat < 1:175878‑M1/101‑73 (MQ=255) cgcCAGCCAATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatt > 1:2898072‑M1/1‑28 (MQ=255) tcagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCGTTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTa < 1:14328649‑M2/78‑1 (MQ=255) gccagccaATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattt > 1:2313745‑M1/1‑27 (MQ=255) cagggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTAt > 1:11749040‑M2/23‑101 (MQ=255) agggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTAtt < 1:1356845‑M2/80‑1 (MQ=255) agggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTAtt < 1:6269143‑M2/80‑1 (MQ=255) gggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTc > 1:3220745‑M2/21‑101 (MQ=255) gggacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTc < 1:6617618‑M2/81‑1 (MQ=255) gacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTa > 1:3848194‑M2/19‑101 (MQ=255) gacttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTa < 1:3436670‑M2/83‑1 (MQ=255) ccaATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct > 1:14577271‑M1/1‑22 (MQ=255) caATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc > 1:4324723‑M1/1‑21 (MQ=255) caATTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc < 1:13884967‑M1/101‑81 (MQ=255) acttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTAc > 1:5939225‑M2/18‑101 (MQ=255) cttgttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACt > 1:6799753‑M2/17‑101 (MQ=255) aaTTCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcc > 1:13380716‑M1/1‑20 (MQ=255) ttCCCGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg < 1:7458326‑M1/101‑84 (MQ=255) gttcgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACTGCt < 1:3320370‑M2/88‑1 (MQ=255) ccGCAGCGCGTCTAGggaaggtgcgaataagcggggaaattcttctcggctgtctcagtcatttcatttcttcatgtttgagccgattttttctcccgtaa < 1:12927019‑M1/101‑87 (MQ=255) cgcaccttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACTGCTTTg < 1:557884‑M2/91‑1 (MQ=255) cttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACTGCTTTGTAagt < 1:5171000‑M2/96‑1 (MQ=255) ttccCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACTGCTTTGTAagta < 1:5679845‑M2/97‑1 (MQ=255) cCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACTGCTTTGTAAgtagta > 1:9406588‑M2/2‑101 (MQ=255) cTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACTGCTTTGTAAGTAGTaa > 1:14161390/1‑101 (MQ=255) | CGGACTGCGGTAAATACCCGTCCGGACTTATTGCCAGCTCAAACCAACGTTAATAGCCATCCTAAAATAGACGAAGCGCCAGCCAATTCCCGCAGCGCGTCTAGCGTCATCAGGATTATAAGTACCCAAATAAACGGATTCATTTTGCTGTGTGTCATTTATTACTGATGCGCAGTTATTCTACTGCTTTGTAAGTAGTAA > NC_007779/1672677‑1672877 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |