| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,449,257 | C→G | 19.8% | R692P (CGT→CCT) | rpoC ← | RNA polymerase, beta prime subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,449,257 | 0 | C→G | 19.8% | 192.7 0.0 ‑0.1 | 278 | R692P (CGT→CCT) | rpoC | RNA polymerase, beta prime subunit |
| Reads supporting (aligned to +/- strand): new base (26/29): ref base (105/118): total (131/147) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.68e-01 | ||||||||||
Only 100 of 295 total aligned reads displayed.
CATCATGTAGATGCTGTTGAAGGAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGAATTTCAGCAACTTCTGC > NC_007779/3449157‑3449357 | atcatGTAGATGCTGTTGAAGGAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACg < 1:1940918/101‑1 (MQ=255) atcatGTAGATGCTGTTGAAGGAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACg > 1:8248077/1‑101 (MQ=255) tGTAGATGCTGTTGAAGGAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCg < 1:10684718/101‑1 (MQ=255) aGATGCTGTTGAAGGAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTc < 1:2939485/101‑1 (MQ=255) aGATGCTGTTGAAGGAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTc < 1:2820596/101‑1 (MQ=255) aGATGCTGTTGAAGGAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTc > 1:4281651/1‑101 (MQ=255) gCTGTTGAAGGAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTcgccg < 1:14295377/101‑1 (MQ=255) gCTGTTGAAGGAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTcgccg < 1:8021739/101‑1 (MQ=255) cTGTTGAAGGAAACCTGCTTCTCTTCCTCACCGTCACGGTTAATCACGGTTTCAGCTTGCAGGGTATCCATCATCGCTTTGGATACACGATCGTTcgccgc > 1:849723/1‑101 (MQ=255) tGTTGAAGTAAGCCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCa < 1:7878914/101‑1 (MQ=255) tGTTGAAGGAAACCTGCCTCTCTTCCTTACCGTCACGGTTAATCACGGTTTCACTTTGCAGGTTATCCATCATCGCTTTGGATACACCATCGTTCGCCGCa < 1:725452/101‑1 (MQ=255) gTTGAAGGAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAg < 1:3758858/101‑1 (MQ=255) tgtaGGAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGcc > 1:11197159/4‑101 (MQ=255) gAAGGAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGccc > 1:9182388/1‑101 (MQ=255) gAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGat > 1:11870825/1‑101 (MQ=255) gAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGat < 1:5065798/101‑1 (MQ=255) gAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGat > 1:6145334/1‑101 (MQ=255) gAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTACAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGat < 1:12048704/101‑1 (MQ=255) aCCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATc < 1:1646961/101‑1 (MQ=255) ccTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCg < 1:12359572/101‑1 (MQ=255) cTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGa < 1:11412950/101‑1 (MQ=255) cTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGa < 1:8694087/101‑1 (MQ=255) tGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGAt < 1:7374519/101‑1 (MQ=255) gCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATa > 1:2478084/1‑101 (MQ=255) gCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATa > 1:3824084/1‑101 (MQ=255) cTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACAGGATCGTTCGCCGCAGCCCAGATATCGATaa < 1:643384/101‑1 (MQ=255) cTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATaa > 1:1568348/1‑101 (MQ=255) cTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATaa < 1:6707283/101‑1 (MQ=255) tctcTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACt > 1:9809220/1‑101 (MQ=255) ctctTCCTGAGCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACtt < 1:487074/101‑1 (MQ=255) ttCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTttgt > 1:14126146/1‑101 (MQ=255) tCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACAGGATCGTTCGCCGCAGCCCAGATATCGATAACTttgtt > 1:4333946/1‑101 (MQ=255) tCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTttgtt > 1:4960836/1‑101 (MQ=255) tCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTttgtt < 1:10160776/101‑1 (MQ=255) tCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTttgtt > 1:2736992/1‑101 (MQ=255) ccTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACAGGATCGTTCGCCGCAGCCCAGATATCGATAACTttgttg > 1:10570815/1‑101 (MQ=255) cTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACAGGATCGTTCGCCGCAGCCCAGATATCGATAACTTtgttgt < 1:3322468/101‑1 (MQ=255) cTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTtgttgt < 1:14184610/101‑1 (MQ=255) tGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTa < 1:11018448/101‑1 (MQ=255) gACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACAGGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAg > 1:734772/1‑101 (MQ=255) gACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAg < 1:2005600/101‑1 (MQ=255) ccGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCTCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCg < 1:4695124/101‑1 (MQ=255) ccGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCg > 1:7387414/1‑101 (MQ=255) gTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGtt < 1:137450/101‑1 (MQ=255) tCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACAGGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTc > 1:12373137/1‑101 (MQ=255) tCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTc > 1:582964/1‑101 (MQ=255) tCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTc < 1:12834871/101‑1 (MQ=255) cACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCg < 1:9625844/101‑1 (MQ=255) cACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCg > 1:13591651/1‑101 (MQ=255) aCGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGc < 1:3701773/101‑1 (MQ=255) aCGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGc < 1:7176195/101‑1 (MQ=255) aCGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGc > 1:11047528/1‑101 (MQ=255) aCGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGc > 1:9193814/1‑101 (MQ=255) aCGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATAGTTTTGGATAAACGATCGTTCGCAGGGGCCAGGATATCGATAACTTTGTTGTAGCGTTTGc > 1:3170082/1‑101 (MQ=255) ggTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACAGGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGccc > 1:4574036/1‑101 (MQ=255) ggTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGccc < 1:11149929/101‑1 (MQ=255) aaTCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAg > 1:10024248/1‑101 (MQ=255) aTCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACAGGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGt > 1:5473010/1‑101 (MQ=255) tCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACAGGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGtt > 1:4484835/1‑101 (MQ=255) cACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTa < 1:4853444/101‑1 (MQ=255) aCGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTac < 1:2408410/101‑1 (MQ=255) cGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTacc > 1:256222/1‑101 (MQ=255) ggTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTacca > 1:9963148/1‑101 (MQ=255) ggTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTacca > 1:14044049/1‑101 (MQ=255) gTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTaccag < 1:11791513/101‑1 (MQ=255) gTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTaccag > 1:7113354/1‑101 (MQ=255) ttCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTaccagac < 1:6805972/101‑1 (MQ=255) tCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTaccagacc < 1:4031624/101‑1 (MQ=255) tCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTaccagacc < 1:10836868/101‑1 (MQ=255) tttGCAGGTTATCCATCATCGCTTTGGCTCCAGGATCGTTCACCCCAGCCCAGATATCGATGACTTTGTTGTAGCGTTCGCCCGCACATACcagaccagac > 1:6938703/1‑101 (MQ=255) tttGCAGGTTATCCATCATCGCTTTGGATACAGGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACcagaccagac < 1:14483013/101‑1 (MQ=255) ttGCAGGTTATCCATCATCGCTTTGGATACAGGATCGTTTGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACt < 1:4115388/101‑1 (MQ=255) tGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTg > 1:6006004/1‑101 (MQ=255) tGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTg < 1:8831912/101‑1 (MQ=255) cAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGa < 1:127896/101‑1 (MQ=255) ggTTATCCATCATCGCTTTGGATACAGGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAAc > 1:6595677/1‑101 (MQ=255) ggTTATCCATCATCGCTTTGGATACAGGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAAc > 1:11121080/1‑101 (MQ=255) gTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACt > 1:7793238/1‑101 (MQ=255) ttATCCATCATCGCTTTGGATACAGGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTg < 1:14427258/101‑1 (MQ=255) tATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGc > 1:8373404/1‑101 (MQ=255) tATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGc > 1:3476489/1‑101 (MQ=255) aTCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCt > 1:6084383/1‑101 (MQ=255) aTCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCt > 1:5294757/1‑101 (MQ=255) catcatCGCTTTGGATACAGGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCt < 1:11279314/101‑1 (MQ=255) catcatCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCt < 1:6891156/101‑1 (MQ=255) catcGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGaa < 1:9395940/101‑1 (MQ=255) atcGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGAAt > 1:2199762/1‑101 (MQ=255) cGCTTTGGATACACGATCGTTCACCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGAAttt < 1:10077298/101‑1 (MQ=255) gCTTTGGATACAGGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGAATTTc < 1:13326270/101‑1 (MQ=255) gCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGAATTTc > 1:12985018/1‑101 (MQ=255) tttGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGAATTTCAg > 1:12224828/1‑101 (MQ=255) tttGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGAATTTCAg < 1:13040230/101‑1 (MQ=255) tttGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGAATTTCAg > 1:6342431/1‑101 (MQ=255) tttGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGAATTTCAg > 1:5640962/1‑101 (MQ=255) tGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGAATTTCAGCa > 1:771402/1‑101 (MQ=255) gATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGAATTTCAGCAAc > 1:8598035/1‑101 (MQ=255) aTACAGGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGAATTTCAGCAAct > 1:7561565/1‑101 (MQ=255) cacGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGAATTTCAGCAActtct < 1:745721/101‑1 (MQ=255) acGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGAATTTCAGCAActtctg > 1:12665486/1‑101 (MQ=255) cGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGAATTTCAGCAActtctgc > 1:11572023/1‑101 (MQ=255) | CATCATGTAGATGCTGTTGAAGGAAACCTGCTTCTCTTCCTGACCGTCACGGTTAATCACGGTTTCAGTTTGCAGGTTATCCATCATCGCTTTGGATACACGATCGTTCGCCGCAGCCCAGATATCGATAACTTTGTTGTAGCGTTCGCCCGCAGTTACCAGACCAGACTGGAACTGCTCCTGAATTTCAGCAACTTCTGC > NC_007779/3449157‑3449357 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |