New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 3558177 =230 (0.810)3 (0.010) 3/178 NT 1.3% intergenic (‑787/+66) yiiE/yiiD transcriptional regulator/acetyltransferase
?NC_007779 = 4056986 NA (NA)coding (389/414 nt) yrhA hypothetical protein

Only 100 of 272 total aligned reads displayed.

GTTCTACAAATAATATTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGCCCTCTTCATACGGGC  >  NC_007779/3558077‑3558277
                                                                                                    |                                                                                                    
gTTCTACAAATAATATTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAAc                                                                                                      <  1:11878707/101‑1 (MQ=255)
cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacc                                                                                                      <  1:1583134‑M1/1‑1 (MQ=255)
cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacc                                                                                                      <  1:575174‑M1/1‑1 (MQ=255)
cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacc                                                                                                      >  1:13001309‑M1/101‑101 (MQ=255)
cgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacc                                                                                                      <  1:12243690‑M1/1‑1 (MQ=255)
  tCTACAAATAATATTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCg                                                                                                    >  1:1074206/1‑101 (MQ=255)
   cTACAAATAATATTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGa                                                                                                   <  1:8152740/101‑1 (MQ=255)
    tACAAATAATATTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGaa                                                                                                  >  1:2146561/1‑101 (MQ=255)
    tACAAATAATATTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGaa                                                                                                  >  1:5961203/1‑101 (MQ=255)
    tACAAATAATATTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGaa                                                                                                  <  1:14048873/101‑1 (MQ=255)
     aCAAATAATATTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGaaa                                                                                                 >  1:6759576/1‑101 (MQ=255)
        aataatATTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATATCCGAAATAg                                                                                              >  1:6094053/1‑101 (MQ=255)
        aataatATTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAg                                                                                              >  1:10928159/1‑101 (MQ=255)
        aataatATTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAg                                                                                              >  1:2508561/1‑101 (MQ=255)
         ataataTTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGc                                                                                             <  1:11509238/101‑1 (MQ=255)
          taataTTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGcc                                                                                            <  1:13540330/101‑1 (MQ=255)
          taataTTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGcc                                                                                            <  1:13157481/101‑1 (MQ=255)
          taataTTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGcc                                                                                            >  1:1455550/1‑101 (MQ=255)
          taataTTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGcc                                                                                            >  1:9348302/1‑101 (MQ=255)
           aataTTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCa                                                                                           >  1:11350411/1‑101 (MQ=255)
           aataTTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCa                                                                                           >  1:10145193/1‑101 (MQ=255)
            atatTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCaa                                                                                          <  1:13672996/101‑1 (MQ=255)
             tatTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAg                                                                                         <  1:8213187/101‑1 (MQ=255)
             tatTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAg                                                                                         <  1:2067865/101‑1 (MQ=255)
                ttAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGAc                                                                                      >  1:6859833/1‑101 (MQ=255)
                 tAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACt                                                                                     <  1:4995162/101‑1 (MQ=255)
                 tAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACt                                                                                     >  1:12941119/1‑101 (MQ=255)
                 tAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACt                                                                                     >  1:1789283/1‑101 (MQ=255)
                  aaaTGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTa                                                                                    >  1:14282582/1‑101 (MQ=255)
                  aaaTGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTa                                                                                    <  1:12839421/101‑1 (MQ=255)
                  aaaTGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTa                                                                                    <  1:10973505/101‑1 (MQ=255)
                       cTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAAtata                                                                               <  1:9572312/101‑1 (MQ=255)
                        tCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATaa                                                                              >  1:345563/1‑101 (MQ=255)
                         ccTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATaaa                                                                             >  1:11076417/1‑101 (MQ=255)
                         ccTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGATCTTATTTAATATAACCGAAATAGCCAAGGACTAATATaaa                                                                             >  1:3864670/1‑101 (MQ=255)
                           tGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATg                                                                           <  1:8268169/101‑1 (MQ=255)
                            gAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGa                                                                          >  1:14153110/1‑101 (MQ=255)
                            gAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGa                                                                          >  1:7306534/1‑101 (MQ=255)
                             aaCAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGAc                                                                         >  1:5453048/1‑101 (MQ=255)
                             aaCAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGAc                                                                         <  1:12018845/101‑1 (MQ=255)
                              aCAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGAcc                                                                        >  1:9514931/1‑101 (MQ=255)
                              aCAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGAcc                                                                        >  1:14411382/1‑101 (MQ=255)
                              aCAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGAcc                                                                        >  1:3151106/1‑101 (MQ=255)
                                aGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTg                                                                      >  1:9433976/1‑101 (MQ=255)
                                aGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTg                                                                      >  1:6482041/1‑101 (MQ=255)
                                  tGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGaa                                                                    >  1:2627842/1‑101 (MQ=255)
                                   gATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTTTTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAAt                                                                   >  1:7978869/1‑101 (MQ=255)
                                   gATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAAt                                                                   <  1:6694635/101‑1 (MQ=255)
                                       tAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATgaga                                                               <  1:14299979/101‑1 (MQ=255)
                                         gCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATgagaga                                                             <  1:4130805/101‑1 (MQ=255)
                                                acGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGgcagca                                                      <  1:8887110/101‑1 (MQ=255)
                                                 cGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCAc                                                     <  1:13869906/101‑1 (MQ=255)
                                                   tATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCg                                                   <  1:14360790/101‑1 (MQ=255)
                                                   tATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCg                                                   >  1:3580393/1‑101 (MQ=255)
                                                        aGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCct                                              >  1:7477825/1‑101 (MQ=255)
                                                         gCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCctc                                             <  1:11627041/101‑1 (MQ=255)
                                                           cAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGCGGCAGCACCGCCCCtctc                                           >  1:1911342/1‑101 (MQ=255)
                                                            aaCGAAGATTAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTcc                                          >  1:10999046/1‑101 (MQ=255)
                                                              cGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCAt                                        <  1:4473012/101‑1 (MQ=255)
                                                                aagaaTAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCa                                      >  1:9680797/1‑101 (MQ=255)
                                                                aagaaTAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCa                                      <  1:10060665/101‑1 (MQ=255)
                                                                  gaaTAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGc                                    >  1:12333972/1‑101 (MQ=255)
                                                                  gaaTAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGc                                    >  1:6421974/1‑101 (MQ=255)
                                                                   aaTAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCt                                   <  1:10583158/101‑1 (MQ=255)
                                                                   aaTAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCt                                   <  1:5542949/101‑1 (MQ=255)
                                                                   aaTAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCt                                   >  1:12628856/1‑101 (MQ=255)
                                                                    aTAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTa                                  <  1:5890020/101‑1 (MQ=255)
                                                                    aTAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTa                                  <  1:9030438/101‑1 (MQ=255)
                                                                    aTAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTa                                  <  1:470459/101‑1 (MQ=255)
                                                                     tAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATACCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTAc                                 >  1:3000556/1‑101 (MQ=255)
                                                                      aaaaaTTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTAct                                >  1:778455/1‑101 (MQ=255)
                                                                      aaaaaTTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTAct                                <  1:8914784/101‑1 (MQ=255)
                                                                       aaaaTTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTActc                               <  1:13093170/101‑1 (MQ=255)
                                                                        aaaTTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTActct                              <  1:11676927/101‑1 (MQ=255)
                                                                         aaTTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACtctt                             <  1:12506681/101‑1 (MQ=255)
                                                                          aTTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACtcttc                            >  1:4044922/1‑101 (MQ=255)
                                                                          aTTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACtcttc                            >  1:2237042/1‑101 (MQ=255)
                                                                          aTTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACtcttc                            >  1:2562837/1‑101 (MQ=255)
                                                                           tttATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACtcttct                           >  1:628068/1‑101 (MQ=255)
                                                                            ttATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTcttctt                          >  1:8046683/1‑101 (MQ=255)
                                                                            ttATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTcttctt                          <  1:9091904/101‑1 (MQ=255)
                                                                             tataGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCttcttc                         >  1:13256811/1‑101 (MQ=255)
                                                                                agagTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGtt                      >  1:7955726/1‑101 (MQ=255)
                                                                                  agTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTcc                    >  1:7677682/1‑101 (MQ=255)
                                                                                     tCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGc                 >  1:7366791/1‑101 (MQ=255)
                                                                                       ttATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGccc               >  1:8402114/1‑101 (MQ=255)
                                                                                       ttATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGccc               >  1:3996849/1‑101 (MQ=255)
                                                                                        tATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGCCct              >  1:2847535/1‑101 (MQ=255)
                                                                                          tttAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGCCctct            <  1:2779866/101‑1 (MQ=255)
                                                                                            tAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGCCCTCTTc          <  1:1039652/101‑1 (MQ=255)
                                                                                             aaTATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGCCCTCTTCa         <  1:7456226/101‑1 (MQ=255)
                                                                                             aaTATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGCCCTCTTCa         <  1:930125/101‑1 (MQ=255)
                                                                                              atatAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGCCCTCTTCAt        <  1:12677144/101‑1 (MQ=255)
                                                                                                ataACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGCCCTCTTCATAc      <  1:14092180/101‑1 (MQ=255)
                                                                                                ataACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGCCCTCTTCATAc      >  1:11848013/1‑101 (MQ=255)
                                                                                                ataACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTACCGCCCTCTTCATAc      >  1:4366236/1‑101 (MQ=255)
                                                                                                 taACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGCCCTCTTCATACg     >  1:12093487/1‑101 (MQ=255)
                                                                                                  aaCCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGCCCTCTTCATACgg    >  1:3262136/1‑101 (MQ=255)
                                                                                                  aaCCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGCCCTCTTCATACgg    <  1:8700889/101‑1 (MQ=255)
                                                                                                    CCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGCCCTCTTCATACGGGc  >  1:10310798‑M1/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
GTTCTACAAATAATATTTAAATGCTCCTGAACAGTGATGTAGCAAGACACGTATGGAGCCAACGAAGAATAAAAATTTATAGAGTTCTTATTTAATATAACCGAAATAGCCAAGGACTAATATAAATGACCTGAATGAGAGAGGCAGCACCGCCCCTCTCCATCAGCTACTCTTCTTCGTTCCCGCCCTCTTCATACGGGC  >  NC_007779/3558077‑3558277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.