New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 3261133	0 (0.000)	272 (1.030)	127/168	NT	100%	intergenic (‑59/‑69)	tdcE/insH	pyruvate formate‑lyase 4/2‑ketobutyrate formate‑lyase/IS5 element protein
	?	NC_007779	= 3748109	NA (NA)					intergenic (+150/+962)	insH/tnaA	IS5 element protein/tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent

CGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAGAACACCAGCAGG  >  NC_007779/3748023‑3748123                                                                                       |               cGGGAGAAAAAGTCGGCTCAAACATGAAGATATGAAATGACTGAGTCAGCCGATAAGAATTTCCCCGCTTATTCCCACCTTCCCTAGAGGacaacgtgcag  <  1:4767864/101‑9 (MQ=11)                                                                                       |               CGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAGAACACCAGCAGG  >  NC_007779/3748023‑3748123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.