| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 4,315,756 | T→C | 0.58% | intergenic (‑98/+29) | alsA ← / ← alsB | fused D‑allose transporter subunits and ATP‑binding components of ABC superfamily/D‑allose transporter subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 4,315,756 | 0 | T→C | 0.6% | 20.4 ‑0.5 ‑0.0 | 2863 | intergenic (‑98/+29) | alsA/alsB | fused D‑allose transporter subunits and ATP‑binding components of ABC superfamily/D‑allose transporter subunit |
| Reads supporting (aligned to +/- strand): new base (10/7): ref base (1433/1411): total (1444/1419) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.28e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.89e-01 | ||||||||||
Only 100 of 3083 total aligned reads displayed.
CATAAATAACCTCTCTGCACGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAACCTTGCCGGA > NC_007779/4315656‑4315856 | tcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct < 1:13814571‑M2/1‑1 (MQ=255)tcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct < 1:4008042‑M2/1‑1 (MQ=255)tcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct > 1:11845185‑M2/101‑101 (MQ=255) cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt < 1:8539593‑M2/2‑1 (MQ=255) cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt > 1:89146‑M2/100‑101 (MQ=255) cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt > 1:4259804‑M2/100‑101 (MQ=255) cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt < 1:11717941‑M2/2‑1 (MQ=255) cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt < 1:3148803‑M2/2‑1 (MQ=255) actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa < 1:10128580‑M2/3‑1 (MQ=255) actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa > 1:9529481‑M2/99‑101 (MQ=255) actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa < 1:2600137‑M2/3‑1 (MQ=255) ctgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg < 1:6698290‑M2/4‑1 (MQ=255) ctgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg > 1:13354290‑M2/98‑101 (MQ=255) tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGc > 1:7364586‑M2/97‑101 (MQ=255) aataaCCTCTCTGCACGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGc < 1:928211/101‑1 (MQ=255) gtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGca < 1:11361634‑M2/6‑1 (MQ=255) cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGcatc > 1:7928444‑M2/94‑101 (MQ=255) cggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGcatc > 1:8702292‑M2/94‑101 (MQ=255) ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccttagcgcaa < 1:1723108‑M2/9‑5 (MQ=255) ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGcatca > 1:4614597‑M2/93‑101 (MQ=255) ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGcatca < 1:4879303‑M2/9‑1 (MQ=255) agcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGcatca > 1:2149121‑M2/93‑101 (MQ=255) cgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGcatcatc > 1:9759880‑M2/91‑101 (MQ=255) tctctGCACGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGcatcatca < 1:3024162/101‑1 (MQ=255) gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGcatcatca < 1:12115345‑M2/12‑1 (MQ=255) gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGcatcatca > 1:776200‑M2/90‑101 (MQ=255) aaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGcatcatcat > 1:1596832‑M2/89‑101 (MQ=255) ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATcc < 1:7494308‑M2/15‑1 (MQ=255) taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCgg > 1:2432473‑M2/85‑101 (MQ=255) aagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGAATCATCATCCGGc < 1:1365796‑M2/18‑1 (MQ=255) gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGcat < 1:6289605‑M2/20‑1 (MQ=255) gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGcatcat < 1:9157605‑M2/23‑1 (MQ=255) atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCAtt > 1:143607‑M2/78‑101 (MQ=255) atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCAtt < 1:10962567‑M2/24‑1 (MQ=255) tgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTc < 1:2814182‑M2/25‑1 (MQ=255) actcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAg > 1:694947‑M2/75‑101 (MQ=255) actcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAg > 1:6160204‑M2/75‑101 (MQ=255) tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGtt < 1:3635965‑M2/29‑1 (MQ=255) catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGttt < 1:10838279‑M2/30‑1 (MQ=255) atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGtttt > 1:10705544‑M2/71‑101 (MQ=255) tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTa > 1:43721‑M2/70‑101 (MQ=255) tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTg < 1:4537276‑M2/35‑1 (MQ=255) gCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAg < 1:8085076/101‑1 (MQ=255) aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAg < 1:14197325‑M2/37‑1 (MQ=255) ccctgttctatggctccagacgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTg > 1:1263864‑M2/63‑101 (MQ=255) tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGAcc > 1:6437699‑M2/60‑101 (MQ=255) tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGAcc < 1:708975‑M2/42‑1 (MQ=255) tgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGAcc < 1:7656692‑M2/42‑1 (MQ=255) aTGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGAcc > 1:11581314/1‑101 (MQ=255) gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCa < 1:14039515‑M2/43‑1 (MQ=255) tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAgg > 1:11098564‑M2/57‑101 (MQ=255) cTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGa < 1:3282650/101‑1 (MQ=255) atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGAtt < 1:8408036‑M2/48‑1 (MQ=255) atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGAtt < 1:5733701‑M2/48‑1 (MQ=255) atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGAtt < 1:1040471‑M2/48‑1 (MQ=255) ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGa < 1:13916972‑M2/50‑1 (MQ=255) ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAAt < 1:13502547‑M2/52‑1 (MQ=255) tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATc < 1:13118108‑M2/53‑1 (MQ=255) cagatgacaaacatgatctcatatcagggtcttgttcgcaccttccTTAGCATCGTCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATcgg < 1:9860628‑M2/55‑2 (MQ=255) cagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGa < 1:11975137‑M2/55‑1 (MQ=255) tgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAg < 1:5356068‑M2/59‑1 (MQ=255) gacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGt < 1:6819308‑M2/60‑1 (MQ=255) gacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGt < 1:1864975‑M2/60‑1 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGttt > 1:3517266‑M2/40‑101 (MQ=255) aaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTa < 1:5223044‑M2/63‑1 (MQ=255) aaacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTa > 1:12402498‑M2/39‑101 (MQ=255) aacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTaa > 1:291102‑M2/38‑101 (MQ=255) aacatgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTaa < 1:9383707‑M2/64‑1 (MQ=255) tgatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTc > 1:2725966‑M2/34‑101 (MQ=255) gatctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTcc > 1:10293931‑M2/33‑101 (MQ=255) ctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGt > 1:12789144‑M2/30‑101 (MQ=255) ctcatatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGt < 1:10003415‑M2/72‑1 (MQ=255) catatcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGc > 1:5593984‑M2/28‑101 (MQ=255) ttttGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCt < 1:8818786/101‑1 (MQ=255) atcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCttt < 1:5897056‑M2/77‑1 (MQ=255) atcagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCttt > 1:14474270‑M2/25‑101 (MQ=255) cagggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTAt < 1:9032654‑M2/79‑1 (MQ=255) agggacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATc < 1:1056756‑M2/80‑1 (MQ=255) gacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAg > 1:3888933‑M2/19‑101 (MQ=255) gacttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAg > 1:3420781‑M2/19‑101 (MQ=255) acttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGc < 1:1481534‑M2/84‑1 (MQ=255) cttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCg > 1:9647102‑M2/17‑101 (MQ=255) ttgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCgg > 1:12237955‑M2/16‑101 (MQ=255) tgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCggg > 1:11234351‑M2/15‑101 (MQ=255) tgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCggg < 1:2294824‑M2/87‑1 (MQ=255) tgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCggg < 1:13224102‑M2/87‑1 (MQ=255) tgttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCggg > 1:5001064‑M2/15‑101 (MQ=255) gttcgccccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGa < 1:1999460‑M2/88‑1 (MQ=255) gttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGa > 1:12510654‑M2/14‑101 (MQ=255) ttcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGAt < 1:11463271‑M2/89‑1 (MQ=255) tcgcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATa < 1:6005677‑M2/90‑1 (MQ=255) gcaccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAAc > 1:4766187‑M2/10‑101 (MQ=255) caccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAAcc > 1:7225189‑M2/9‑101 (MQ=255) caccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAAcc < 1:658264‑M2/93‑1 (MQ=255) caccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAAcc > 1:4129472‑M2/9‑101 (MQ=255) accttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAACCt < 1:8201441‑M2/94‑1 (MQ=255) ccttccTTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAACCtt < 1:12973601‑M2/95‑1 (MQ=255) cATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAACCTTGCCg > 1:5471220/1‑101 (MQ=255) ttAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAACCTTGCCGGa > 1:3754263/1‑101 (MQ=255) ttAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAACCTTGCCGGa < 1:5097380/101‑1 (MQ=255) | CATAAATAACCTCTCTGCACGAAATATCGTATTATTGCCTGATGGCTACATTTATCAGGTCTACGTTCAGGTTATTTTGTTGGCCGGATAAGACACTTCATTAGCATCATCATCCGGCATCATTCAGTTTTATTGAGTGACCAGGATTGAATCGACCAGTTTAAATTCCGGTGCTTTATCCAGCGGGATAACCTTGCCGGA > NC_007779/4315656‑4315856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |