BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_007779	= 1907288	13 (0.040)	238 (0.810)	131/180	NT	94.8%	intergenic (+315/‑114)	yobD/yebN	inner membrane protein/inner membrane protein
*	?	NC_007779	2411458 =	NA (NA)	238 (0.810)	131/180	NT	94.8%	intergenic (‑147/+15)	lrhA/insB	DNA‑binding transcriptional repressor/IS1 element protein

Only 100 of 325 total aligned reads displayed.

CACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCG  >  NC_007779/2411358‑2411556

cacacacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCg                                                                                                    >  1:905372/1‑101 (MQ=255)

 acacacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCgg                                                                                                   <  1:6191330/101‑1 (MQ=255)

 acacacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTCGCACT‑AAAAAAGCgg                                                                                                   >  1:13839171/1‑101 (MQ=255)

  cacacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGt                                                                                                  <  1:12827378/101‑1 (MQ=255)

    cacaAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTaa                                                                                                >  1:8170858/1‑101 (MQ=255)

      caaacaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATg                                                                                              <  1:14787483/101‑1 (MQ=255)

         acaaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACt                                                                                           <  1:10555822/101‑1 (MQ=255)

           aaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTcc                                                                                         <  1:9492902/101‑1 (MQ=255)

           aaGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTcc                                                                                         >  1:510785/1‑101 (MQ=255)

             gCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCaa                                                                                       <  1:10662792/101‑1 (MQ=255)

             gCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCaa                                                                                       <  1:1295719/101‑1 (MQ=255)

              cAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAAc                                                                                      <  1:8665335/101‑1 (MQ=255)

               aaTTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACt                                                                                     <  1:5960611/101‑1 (MQ=255)

                aTTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGAACT‑AAAAAAGCGGTAATGACTCCAACtt                                                                                    >  1:3060572/1‑101 (MQ=255)

                 ttCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTa                                                                                   <  1:9666852/101‑1 (MQ=255)

                  tCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTAt                                                                                  >  1:9778050/1‑101 (MQ=255)

                   ccATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTAtt                                                                                 <  1:1810710/101‑1 (MQ=255)

                   ccATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTAtt                                                                                 >  1:3707709/1‑101 (MQ=255)

                       ttGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATa                                                                             >  1:11880376/1‑101 (MQ=255)

                         gTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAgt                                                                           >  1:192513/1‑101 (MQ=255)

                          tAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAgtg                                                                          <  1:8986154/101‑1 (MQ=255)

                           aaTGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAgtgt                                                                         >  1:14547435/1‑101 (MQ=255)

                            aTGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGtt                                                                        >  1:6741859/1‑101 (MQ=255)

                              gtgCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGtttt                                                                      <  1:2203560/101‑1 (MQ=255)

                               tgCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTa                                                                     >  1:4296383/1‑101 (MQ=255)

                                gCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTAt                                                                    <  1:2550824/101‑1 (MQ=255)

                                 ccTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATg                                                                   <  1:10028658/101‑1 (MQ=255)

                                  cTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGt                                                                  <  1:2004138/101‑1 (MQ=255)

                                  cTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGt                                                                  <  1:11734614/101‑1 (MQ=255)

                                   tCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGtt                                                                 >  1:13481358/1‑101 (MQ=255)

                                   tCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGtt                                                                 <  1:4718186/101‑1 (MQ=255)

                                   tCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGtt                                                                 >  1:1869234/1‑101 (MQ=255)

                                   tCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGtt                                                                 >  1:8035774/1‑101 (MQ=255)

                                    cccTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTACAACTTATTGATAGTGTTTTATGTTc                                                                >  1:5716140/1‑101 (MQ=255)

                                     ccTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCa                                                               <  1:9144277/101‑1 (MQ=255)

                                       tGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGa                                                             >  1:13679016/1‑101 (MQ=255)

                                        ggCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGAt                                                            <  1:7617904/101‑1 (MQ=255)

                                        ggCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGAt                                                            >  1:3386863/1‑101 (MQ=255)

                                         gCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATa                                                           <  1:14430569/101‑1 (MQ=255)

                                           aGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAt                                                         <  1:11152083/101‑1 (MQ=255)

                                           aGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAt                                                         >  1:6849233/1‑101 (MQ=255)

                                             tttCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAtcc                                                       >  1:3842609/1‑99 (MQ=255)

                                               tCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGccc                                                     <  1:1338286/101‑1 (MQ=255)

                                                cATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCg                                                    <  1:10748452/101‑1 (MQ=255)

                                                 aTCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGa                                                   >  1:6259186/1‑101 (MQ=255)

                                                 aTCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGa                                                   >  1:10348015/1‑101 (MQ=255)

                                                  tCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGCTAGTGTTTTATGTTCAGATAATGCCCGAt                                                  >  1:1151656/1‑101 (MQ=255)

                                                    cGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGa                                                >  1:2945259/1‑101 (MQ=255)

                                                     ggAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGAc                                               <  1:5397508/101‑1 (MQ=255)

                                                     ggAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGAc                                               >  1:9921274/1‑101 (MQ=255)

                                                     ggAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGAc                                               <  1:7469130/101‑1 (MQ=255)

                                                     ggAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGAc                                               >  1:8334111/1‑101 (MQ=255)

                                                      gAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACt                                              >  1:10898398/1‑101 (MQ=255)

                                                       aaCCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACtt                                             >  1:5286892/1‑101 (MQ=255)

                                                        aCCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACttt                                            <  1:7047664/101‑1 (MQ=255)

                                                        aCCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACttt                                            <  1:1020509/101‑1 (MQ=255)

                                                        aCCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACttt                                            <  1:10476925/101‑1 (MQ=255)

                                                        aCCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACttt                                            <  1:4865797/101‑1 (MQ=255)

                                                        aCCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACttt                                            <  1:12522285/101‑1 (MQ=255)

                                                        aCCCGGACGAAAGTAAAAATGCATATGAGGTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACttt                                            <  1:16668/101‑1 (MQ=255)

                                                          ccGGACGAAAGTAAAAATGCGTATGAGTTGCACTAAAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTg                                           >  1:9274459/1‑101 (MQ=255)

                                                            ggACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAAGTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCa                                        >  1:12730808/1‑101 (MQ=255)

                                                             gACGAAAGTAAAAATGGATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCAt                                       <  1:3786550/101‑1 (MQ=255)

                                                             gACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCAt                                       <  1:12139175/101‑1 (MQ=255)

                                                              aCGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATg                                      <  1:7167519/101‑1 (MQ=255)

                                                              aCGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATg                                      <  1:1771347/101‑1 (MQ=255)

                                                               cGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGtagatc                                     >  1:12295383/1‑96 (MQ=255)

                                                               cGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGc                                     >  1:7988400/1‑101 (MQ=255)

                                                               cGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGc                                     >  1:14344210/1‑101 (MQ=255)

                                                                gAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCa                                    >  1:5785134/1‑101 (MQ=255)

                                                                gAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCa                                    >  1:5972029/1‑101 (MQ=255)

                                                                 aaaGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAg                                   >  1:4188427/1‑101 (MQ=255)

                                                                 aaaGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAg                                   <  1:5457115/101‑1 (MQ=255)

                                                                 aaaGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATCGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAg                                   >  1:10089296/1‑101 (MQ=255)

                                                                   aGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCt                                 >  1:6978115/1‑101 (MQ=255)

                                                                     tAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTcc                               >  1:6669968/1‑101 (MQ=255)

                                                                     tAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTcc                               >  1:12610342/1‑101 (MQ=255)

                                                                       aaaaTGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCAc                             >  1:14894231/1‑101 (MQ=255)

                                                                       aaaaTGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCAc                             >  1:8481739/1‑101 (MQ=255)

                                                                        aaaTGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCAcc                            <  1:3664061/101‑1 (MQ=255)

                                                                         aaTGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCg                           <  1:11327944/101‑1 (MQ=255)

                                                                         aaTGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCg                           <  1:8916149/101‑1 (MQ=255)

                                                                          aTGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGa                          >  1:10978018/1‑101 (MQ=255)

                                                                           tGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGAt                         >  1:310735/1‑101 (MQ=255)

                                                                                 tGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTgag                   <  1:3945326/101‑1 (MQ=255)

                                                                                  gAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTgaga                  >  1:7888779/1‑101 (MQ=255)

                                                                                   aGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGaa                 >  1:3924366/1‑101 (MQ=255)

                                                                                   aGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGaa                 >  1:3461000/1‑101 (MQ=255)

                                                                                    gTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAAc                >  1:2297344/1‑101 (MQ=255)

                                                                                     ttGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCGCCGATTTTGAGAACg               >  1:11244457/1‑101 (MQ=255)

                                                                                      tGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGa              >  1:5038139/1‑101 (MQ=255)

                                                                                          cT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAATGACAGc          <  1:12691376/101‑1 (MQ=255)

                                                                                           t‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCg         >  1:7810327/1‑101 (MQ=38)

                                                                                           t‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCg         <  1:3209690/101‑1 (MQ=38)

                                                                                              aaaaaGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGAc       >  1:4078661/1‑101 (MQ=35)

                                                                                               aaaaGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACt      >  1:4156855/1‑101 (MQ=34)

                                                                                               aaaaGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACt      >  1:6424095/1‑101 (MQ=34)

                                                                                                aaaGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAACGCCtt     >  1:4527630/1‑101 (MQ=16)

                                                                                                 aaGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTc    >  1:2798864/1‑101 (MQ=32)

                                                                                                  aGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTcc   <  1:359270/101‑1 (MQ=31)

CACACACAAACAAGCAATTCCATTTGTAATGTGCCTCCCTGGCAGTTTCATCCGGAACCCGGACGAAAGTAAAAATGCATATGAGTTGCACT‑AAAAAAGCGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCG  >  NC_007779/2411358‑2411556

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.